PDB Chemical Component LGC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LGC

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.404	1.514
C1	O5	1.401	1.351
C1	O1	1.269	1.207
C2	O2	1.406	1.428
C2	C3	1.544	1.532
C2	H2	1.115	1.090
O5	C5	1.443	1.456
O2	HO2	0.950	0.966
C3	O3	1.435	1.428
C3	C4	1.547	1.531
C3	H3	1.115	1.090
O3	HO3	0.949	0.966
C4	O4	1.442	1.429
C4	C5	1.561	1.532
C4	H4	1.115	1.090
O4	HO4	0.949	0.967
C5	C6	1.550	1.530
C5	H5	1.115	1.090
C6	O6	1.480	1.428
C6	H61	1.115	1.090
C6	H62	1.114	1.089
O6	HO6	0.950	0.966

Bond Angles for LGC

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	130.4	117.6
C2	C1	O1	121.5	121.2
C1	C2	O2	115.0	109.7
C1	C2	C3	108.5	108.4
C1	C2	H2	107.3	109.7
O5	C1	O1	107.5	121.2
C1	O5	C5	117.0	118.0
O2	C2	C3	112.2	109.8
O2	C2	H2	103.1	109.6
C2	O2	HO2	115.1	106.9
C3	C2	H2	110.4	109.7
C2	C3	O3	106.0	109.5
C2	C3	C4	104.9	109.2
C2	C3	H3	114.9	109.5
O5	C5	C4	103.3	109.0
O5	C5	C6	101.1	109.6
O5	C5	H5	122.8	109.6
O3	C3	C4	110.8	109.6
O3	C3	H3	109.5	109.5
C3	O3	HO3	106.0	106.8
C4	C3	H3	110.5	109.4
C3	C4	O4	111.2	109.5
C3	C4	C5	106.2	109.4
C3	C4	H4	108.8	109.5
O4	C4	C5	103.4	109.6
O4	C4	H4	111.3	109.5
C4	O4	HO4	111.1	106.8
C5	C4	H4	115.9	109.3
C4	C5	C6	120.5	109.6
C4	C5	H5	104.2	109.5
C6	C5	H5	106.3	109.6
C5	C6	O6	110.5	109.5
C5	C6	H61	111.8	109.4
C5	C6	H62	111.8	109.5
O6	C6	H61	111.8	109.4
O6	C6	H62	111.8	109.5
C6	O6	HO6	110.5	106.8
H61	C6	H62	98.6	109.5

Torsion Angles for LGC

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	O1	170.2	180.0
C2	C1	O5	C5	344.4	312.2
O2	C2	C1	C3	126.7	119.9
O2	C2	C1	H2	245.9	239.5
C1	C2	O2	HO2	180.0	59.9
C3	C2	C1	H2	119.3	119.7
C1	C2	C3	O3	198.3	186.3
C1	C2	C3	C4	315.7	306.3
C1	C2	C3	H3	77.2	66.1
C2	C1	O5	O1	188.8	180.0
O5	C1	C2	O2	144.0	167.7
O5	C1	C2	C3	17.3	47.8
O5	C1	C2	H2	258.0	288.1
C1	O5	C5	C4	39.1	50.4
C1	O5	C5	C6	164.4	170.4
C1	O5	C5	H5	282.2	290.6
C2	C1	O1	O5	172.2	180.0
O1	C1	C2	O2	333.8	347.6
O1	C1	C2	C3	207.1	227.8
O1	C1	C2	H2	87.9	108.1
O1	C1	O5	C5	155.6	132.2
O2	C2	C1	O5	144.0	167.7
O2	C2	C1	O1	333.8	347.6
C1	C2	O2	C3	235.3	241.0
C1	C2	O2	H2	116.4	120.5
C3	C2	O2	H2	241.2	239.5
O2	C2	C3	O3	70.0	66.5
O2	C2	C3	C4	187.4	186.5
O2	C2	C3	H3	309.0	306.3
C3	C2	C1	O5	17.3	47.8
C3	C2	C1	O1	207.1	227.8
C1	C2	C3	O2	128.2	119.8
C1	C2	C3	H2	242.7	240.3
O2	C2	C3	H2	114.5	120.5
C3	C2	O2	HO2	304.7	178.9
O3	C3	C2	C4	242.6	239.9
O3	C3	C2	H3	121.0	120.1
C2	C3	O3	HO3	180.0	300.1
C4	C3	C2	H3	238.4	240.2
C2	C3	C4	O4	186.5	181.0
C2	C3	C4	C5	74.7	60.8
C2	C3	C4	H4	309.3	301.1
H2	C2	C1	O5	258.0	288.1
H2	C2	C1	O1	87.9	108.1
C1	C2	H2	O2	238.2	239.5
C1	C2	H2	C3	118.1	118.9
O2	C2	H2	C3	239.9	239.4
H2	C2	O2	HO2	63.5	299.5
H2	C2	C3	O3	315.6	306.0
H2	C2	C3	C4	73.0	66.0
H2	C2	C3	H3	194.5	185.8
C5	O5	C1	O1	155.6	132.2
C3	C4	C5	O5	289.8	303.7
O4	C4	C5	O5	172.7	183.6
O5	C5	C4	H4	50.7	63.6
C4	C5	O5	C6	234.7	240.1
C4	C5	O5	H5	116.9	119.8
C6	C5	O5	H5	242.2	239.7
O5	C5	C6	O6	299.1	60.2
O5	C5	C6	H61	64.3	300.3
O5	C5	C6	H62	173.8	180.3
HO2	O2	C2	C3	304.7	178.9
HO2	O2	C2	H2	63.5	299.5
O3	C3	C2	H2	315.6	306.0
C2	C3	O3	C4	113.4	119.9
C2	C3	O3	H3	235.5	239.9
C4	C3	O3	H3	122.1	120.0
O3	C3	C4	O4	300.5	301.0
O3	C3	C4	C5	188.7	180.9
O3	C3	C4	H4	63.4	61.1
C4	C3	C2	H2	73.0	66.0
C2	C3	C4	O3	246.0	240.0
C2	C3	C4	H3	124.4	119.9
O5	C5	C4	C3	289.8	303.7
O3	C3	C4	H3	238.5	239.9
C4	C3	O3	HO3	66.7	180.2
O4	C4	C3	C5	111.8	120.2
O4	C4	C3	H4	237.1	240.0
C3	C4	O4	HO4	180.0	60.0
C5	C4	C3	H4	125.3	119.8
C3	C4	C5	C6	178.3	183.8
C3	C4	C5	H5	59.1	63.6
H3	C3	C2	H2	194.5	185.8
C2	C3	H3	O3	119.1	120.1
C2	C3	H3	C4	241.5	240.3
O3	C3	H3	C4	122.3	120.2
H3	C3	O3	HO3	304.5	60.2
H3	C3	C4	O4	62.0	61.2
H3	C3	C4	C5	310.3	301.0
H3	C3	C4	H4	184.9	181.2
HO3	O3	C3	C4	66.7	180.2
HO3	O3	C3	H3	304.5	60.2
O5	C5	C4	O4	172.7	183.6
O4	C4	C3	H3	62.0	61.2
C3	C4	O4	C5	246.5	240.0
C3	C4	O4	H4	121.4	120.0
C5	C4	O4	H4	234.9	240.1
O4	C4	C5	C6	61.2	63.7
O4	C4	C5	H5	302.0	303.5
O5	C5	C4	C6	111.6	120.0
O5	C5	C4	H5	230.7	240.2
C5	C4	C3	H3	310.3	301.0
C3	C4	C5	O4	117.1	120.1
C3	C4	C5	H4	239.2	240.1
O4	C4	C5	H4	122.1	120.0
C5	C4	O4	HO4	293.5	180.0
C6	C5	C4	H5	119.1	120.2
C4	C5	C6	O6	51.8	179.8
C4	C5	C6	H61	177.1	59.8
C4	C5	C6	H62	286.6	299.8
H4	C4	C3	H3	184.9	181.2
C3	C4	H4	O4	237.2	240.0
C3	C4	H4	C5	119.4	119.8
O4	C4	H4	C5	242.2	239.9
H4	C4	O4	HO4	58.6	300.0
H4	C4	C5	C6	299.1	303.6
H4	C4	C5	H5	180.0	183.4
HO4	O4	C4	C5	293.5	180.0
HO4	O4	C4	H4	58.6	300.0
O5	C5	C6	C4	247.2	240.5
O5	C5	C6	H5	129.2	120.3
C6	C5	C4	H4	299.1	303.6
C4	C5	C6	H5	241.9	239.8
O6	C6	C5	H61	234.8	120.0
O6	C6	C5	H62	125.3	239.9
C5	C6	O6	HO6	179.9	180.0
H61	C6	C5	H62	250.5	120.0
O5	C5	H5	C4	116.4	119.5
O5	C5	H5	C6	244.8	239.7
H5	C5	C4	H4	180.0	183.4
C4	C5	H5	C6	128.3	120.2
H5	C5	C6	O6	169.9	300.0
H5	C5	C6	H61	295.1	180.0
H5	C5	C6	H62	44.6	60.0
O6	C6	C5	H5	169.9	300.0
C5	C6	O6	H61	125.2	240.0
C5	C6	O6	H62	234.7	120.0
H61	C6	O6	H62	109.5	240.0
H61	C6	C5	H5	295.1	180.0
C5	C6	H61	O6	235.5	120.0
C5	C6	H61	H62	117.8	240.0
O6	C6	H61	H62	242.2	120.0
H61	C6	O6	HO6	54.7	300.0
H62	C6	C5	H5	44.6	60.0
C5	C6	H62	O6	124.5	240.0
C5	C6	H62	H61	242.3	120.0
O6	C6	H62	H61	117.8	240.0
H62	C6	O6	HO6	305.2	60.0
HO6	O6	C6	H61	54.7	300.0
HO6	O6	C6	H62	305.2	60.0