PDB Chemical Component LG5
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LG5
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.401 |
1.508 |
C1 |
C6 |
1.388 |
1.330 |
C1 |
H1 |
1.080 |
1.080 |
C2 |
N3 |
1.356 |
1.468 |
C2 |
H21 |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.091 |
N3 |
C4 |
1.355 |
1.396 |
N3 |
C7 |
1.453 |
1.466 |
C4 |
C5 |
1.395 |
1.349 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
C6 |
1.388 |
1.472 |
C5 |
N8 |
1.375 |
1.408 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H71 |
1.100 |
1.090 |
C7 |
H72 |
1.099 |
1.089 |
C7 |
H73 |
1.100 |
1.090 |
N8 |
HN81 |
1.000 |
0.970 |
N8 |
HN82 |
1.000 |
0.970 |
Bond Angles for LG5
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.6 |
120.0 |
C2 |
C1 |
H1 |
119.7 |
119.9 |
C1 |
C2 |
N3 |
118.5 |
109.0 |
C1 |
C2 |
H21 |
104.5 |
109.6 |
C1 |
C2 |
H22 |
106.6 |
109.6 |
C6 |
C1 |
H1 |
119.7 |
120.0 |
C1 |
C6 |
C5 |
119.2 |
120.1 |
C1 |
C6 |
H6 |
120.4 |
120.0 |
N3 |
C2 |
H21 |
104.4 |
109.6 |
N3 |
C2 |
H22 |
106.6 |
109.5 |
C2 |
N3 |
C4 |
122.1 |
118.6 |
C2 |
N3 |
C7 |
120.9 |
120.7 |
H21 |
C2 |
H22 |
116.9 |
109.6 |
C4 |
N3 |
C7 |
116.9 |
120.7 |
N3 |
C4 |
C5 |
120.2 |
118.3 |
N3 |
C4 |
H4 |
119.9 |
121.0 |
N3 |
C7 |
H71 |
109.5 |
109.4 |
N3 |
C7 |
H72 |
109.4 |
109.5 |
N3 |
C7 |
H73 |
109.5 |
109.5 |
C5 |
C4 |
H4 |
119.9 |
120.7 |
C4 |
C5 |
C6 |
119.2 |
119.3 |
C4 |
C5 |
N8 |
120.2 |
120.3 |
C6 |
C5 |
N8 |
120.6 |
120.4 |
C5 |
C6 |
H6 |
120.4 |
119.9 |
C5 |
N8 |
HN81 |
109.5 |
120.0 |
C5 |
N8 |
HN82 |
109.5 |
120.0 |
H71 |
C7 |
H72 |
109.5 |
109.5 |
H71 |
C7 |
H73 |
109.4 |
109.5 |
H72 |
C7 |
H73 |
109.5 |
109.5 |
HN81 |
N8 |
HN82 |
109.4 |
120.0 |
Torsion Angles for LG5
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
2.0 |
0.3 |
C2 |
C1 |
C6 |
H6 |
182.0 |
180.3 |
N3 |
C2 |
C1 |
H21 |
115.7 |
119.9 |
N3 |
C2 |
C1 |
H22 |
240.0 |
240.1 |
C1 |
C2 |
N3 |
C4 |
3.3 |
44.3 |
C1 |
C2 |
N3 |
C7 |
182.3 |
224.1 |
H21 |
C2 |
C1 |
H22 |
124.3 |
120.2 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.0 |
C6 |
C1 |
C2 |
N3 |
357.1 |
331.9 |
C6 |
C1 |
C2 |
H21 |
241.5 |
212.0 |
C6 |
C1 |
C2 |
H22 |
117.1 |
91.7 |
C4 |
C5 |
C6 |
C1 |
358.5 |
15.7 |
C1 |
C6 |
C5 |
N8 |
180.4 |
195.9 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.1 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
N3 |
177.2 |
151.9 |
H1 |
C1 |
C2 |
H21 |
61.5 |
32.0 |
H1 |
C1 |
C2 |
H22 |
297.2 |
271.7 |
H1 |
C1 |
C6 |
C5 |
182.0 |
180.3 |
H1 |
C1 |
C6 |
H6 |
2.0 |
0.3 |
N3 |
C2 |
C1 |
C6 |
357.1 |
331.9 |
N3 |
C2 |
C1 |
H1 |
177.2 |
151.9 |
C1 |
C2 |
N3 |
H21 |
244.3 |
240.1 |
C1 |
C2 |
N3 |
H22 |
120.0 |
119.9 |
H21 |
C2 |
N3 |
H22 |
235.7 |
239.8 |
C4 |
N3 |
C2 |
C7 |
181.0 |
180.2 |
C2 |
N3 |
C4 |
C5 |
357.1 |
328.2 |
C2 |
N3 |
C4 |
H4 |
177.1 |
148.6 |
C2 |
N3 |
C7 |
H71 |
180.2 |
90.0 |
C2 |
N3 |
C7 |
H72 |
60.1 |
210.0 |
C2 |
N3 |
C7 |
H73 |
300.1 |
330.0 |
H21 |
C2 |
C1 |
C6 |
241.5 |
212.0 |
H21 |
C2 |
C1 |
H1 |
61.5 |
32.0 |
C1 |
C2 |
H21 |
N3 |
125.1 |
119.6 |
C1 |
C2 |
H21 |
H22 |
242.5 |
239.8 |
N3 |
C2 |
H21 |
H22 |
117.4 |
120.2 |
H21 |
C2 |
N3 |
C4 |
119.0 |
164.2 |
H21 |
C2 |
N3 |
C7 |
298.0 |
344.0 |
H22 |
C2 |
C1 |
C6 |
117.1 |
91.7 |
H22 |
C2 |
C1 |
H1 |
297.2 |
271.7 |
C1 |
C2 |
H22 |
N3 |
232.6 |
240.4 |
C1 |
C2 |
H22 |
H21 |
116.3 |
120.2 |
N3 |
C2 |
H22 |
H21 |
243.7 |
239.8 |
H22 |
C2 |
N3 |
C4 |
243.3 |
284.4 |
H22 |
C2 |
N3 |
C7 |
62.3 |
104.2 |
C4 |
N3 |
C2 |
H21 |
119.0 |
164.2 |
C4 |
N3 |
C2 |
H22 |
243.3 |
284.4 |
C2 |
N3 |
C4 |
C7 |
179.0 |
179.8 |
C4 |
N3 |
C7 |
H71 |
359.2 |
269.7 |
C4 |
N3 |
C7 |
H72 |
239.1 |
29.7 |
C4 |
N3 |
C7 |
H73 |
119.1 |
149.7 |
C5 |
C4 |
N3 |
H4 |
180.0 |
179.6 |
N3 |
C4 |
C5 |
C6 |
1.9 |
0.2 |
N3 |
C4 |
C5 |
N8 |
180.1 |
180.0 |
C7 |
N3 |
C2 |
H21 |
298.0 |
344.0 |
C7 |
N3 |
C2 |
H22 |
62.3 |
104.2 |
C2 |
N3 |
C7 |
C4 |
181.0 |
180.2 |
C7 |
N3 |
C4 |
C5 |
178.1 |
148.4 |
C7 |
N3 |
C4 |
H4 |
358.1 |
328.8 |
H71 |
C7 |
N3 |
H72 |
120.0 |
240.0 |
H71 |
C7 |
N3 |
H73 |
240.1 |
120.0 |
H72 |
C7 |
N3 |
H73 |
120.0 |
240.0 |
C1 |
C6 |
C5 |
C4 |
358.5 |
15.7 |
C5 |
C4 |
N3 |
C7 |
178.1 |
148.4 |
N3 |
C4 |
C5 |
H4 |
180.0 |
180.4 |
C6 |
C5 |
C4 |
N8 |
181.9 |
180.2 |
C4 |
C5 |
C6 |
H6 |
178.5 |
195.7 |
C4 |
C5 |
N8 |
HN81 |
85.1 |
180.2 |
C4 |
C5 |
N8 |
HN82 |
325.1 |
0.2 |
H4 |
C4 |
N3 |
C7 |
358.1 |
328.8 |
N3 |
C4 |
H4 |
C5 |
180.0 |
179.6 |
H4 |
C4 |
C5 |
C6 |
181.9 |
179.8 |
H4 |
C4 |
C5 |
N8 |
0.0 |
359.6 |
C5 |
C6 |
C1 |
H1 |
182.0 |
180.3 |
C1 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
H4 |
181.9 |
179.8 |
C4 |
C5 |
C6 |
N8 |
178.1 |
179.8 |
C6 |
C5 |
N8 |
HN81 |
263.2 |
0.0 |
C6 |
C5 |
N8 |
HN82 |
143.2 |
180.0 |
N8 |
C5 |
C4 |
H4 |
0.0 |
359.6 |
C4 |
C5 |
N8 |
C6 |
181.9 |
180.2 |
N8 |
C5 |
C6 |
H6 |
0.4 |
15.9 |
HN81 |
N8 |
C5 |
HN82 |
120.0 |
180.1 |
H6 |
C6 |
C1 |
H1 |
2.0 |
0.3 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.1 |
H6 |
C6 |
C5 |
N8 |
0.4 |
15.9 |
N3 |
C7 |
H71 |
H72 |
240.0 |
120.0 |
N3 |
C7 |
H71 |
H73 |
120.0 |
240.0 |
H72 |
C7 |
H71 |
H73 |
240.0 |
120.0 |
N3 |
C7 |
H72 |
H71 |
120.0 |
240.0 |
N3 |
C7 |
H72 |
H73 |
240.0 |
120.0 |
H71 |
C7 |
H72 |
H73 |
120.0 |
239.9 |
N3 |
C7 |
H73 |
H71 |
240.0 |
119.9 |
N3 |
C7 |
H73 |
H72 |
120.0 |
240.0 |
H71 |
C7 |
H73 |
H72 |
240.0 |
120.1 |
C5 |
N8 |
HN81 |
HN82 |
240.0 |
179.9 |
C5 |
N8 |
HN82 |
HN81 |
120.0 |
180.1 |