PDB Chemical Component LG5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LG5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.401 1.508
C1 C6 1.388 1.330
C1 H1 1.080 1.080
C2 N3 1.356 1.468
C2 H21 1.100 1.090
C2 H22 1.100 1.091
N3 C4 1.355 1.396
N3 C7 1.453 1.466
C4 C5 1.395 1.349
C4 H4 1.080 1.080
C5 C6 1.388 1.472
C5 N8 1.375 1.408
C6 H6 1.080 1.080
C7 H71 1.100 1.090
C7 H72 1.099 1.089
C7 H73 1.100 1.090
N8 HN81 1.000 0.970
N8 HN82 1.000 0.970

Bond Angles for LG5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 120.6 120.0
C2 C1 H1 119.7 119.9
C1 C2 N3 118.5 109.0
C1 C2 H21 104.5 109.6
C1 C2 H22 106.6 109.6
C6 C1 H1 119.7 120.0
C1 C6 C5 119.2 120.1
C1 C6 H6 120.4 120.0
N3 C2 H21 104.4 109.6
N3 C2 H22 106.6 109.5
C2 N3 C4 122.1 118.6
C2 N3 C7 120.9 120.7
H21 C2 H22 116.9 109.6
C4 N3 C7 116.9 120.7
N3 C4 C5 120.2 118.3
N3 C4 H4 119.9 121.0
N3 C7 H71 109.5 109.4
N3 C7 H72 109.4 109.5
N3 C7 H73 109.5 109.5
C5 C4 H4 119.9 120.7
C4 C5 C6 119.2 119.3
C4 C5 N8 120.2 120.3
C6 C5 N8 120.6 120.4
C5 C6 H6 120.4 119.9
C5 N8 HN81 109.5 120.0
C5 N8 HN82 109.5 120.0
H71 C7 H72 109.5 109.5
H71 C7 H73 109.4 109.5
H72 C7 H73 109.5 109.5
HN81 N8 HN82 109.4 120.0

Torsion Angles for LG5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.0
C2 C1 C6 C5 2.0 0.3
C2 C1 C6 H6 182.0 180.3
N3 C2 C1 H21 115.7 119.9
N3 C2 C1 H22 240.0 240.1
C1 C2 N3 C4 3.3 44.3
C1 C2 N3 C7 182.3 224.1
H21 C2 C1 H22 124.3 120.2
C2 C1 C6 H1 180.0 180.0
C6 C1 C2 N3 357.1 331.9
C6 C1 C2 H21 241.5 212.0
C6 C1 C2 H22 117.1 91.7
C4 C5 C6 C1 358.5 15.7
C1 C6 C5 N8 180.4 195.9
C5 C6 C1 H6 180.0 180.1
C2 C1 H1 C6 180.0 180.0
H1 C1 C2 N3 177.2 151.9
H1 C1 C2 H21 61.5 32.0
H1 C1 C2 H22 297.2 271.7
H1 C1 C6 C5 182.0 180.3
H1 C1 C6 H6 2.0 0.3
N3 C2 C1 C6 357.1 331.9
N3 C2 C1 H1 177.2 151.9
C1 C2 N3 H21 244.3 240.1
C1 C2 N3 H22 120.0 119.9
H21 C2 N3 H22 235.7 239.8
C4 N3 C2 C7 181.0 180.2
C2 N3 C4 C5 357.1 328.2
C2 N3 C4 H4 177.1 148.6
C2 N3 C7 H71 180.2 90.0
C2 N3 C7 H72 60.1 210.0
C2 N3 C7 H73 300.1 330.0
H21 C2 C1 C6 241.5 212.0
H21 C2 C1 H1 61.5 32.0
C1 C2 H21 N3 125.1 119.6
C1 C2 H21 H22 242.5 239.8
N3 C2 H21 H22 117.4 120.2
H21 C2 N3 C4 119.0 164.2
H21 C2 N3 C7 298.0 344.0
H22 C2 C1 C6 117.1 91.7
H22 C2 C1 H1 297.2 271.7
C1 C2 H22 N3 232.6 240.4
C1 C2 H22 H21 116.3 120.2
N3 C2 H22 H21 243.7 239.8
H22 C2 N3 C4 243.3 284.4
H22 C2 N3 C7 62.3 104.2
C4 N3 C2 H21 119.0 164.2
C4 N3 C2 H22 243.3 284.4
C2 N3 C4 C7 179.0 179.8
C4 N3 C7 H71 359.2 269.7
C4 N3 C7 H72 239.1 29.7
C4 N3 C7 H73 119.1 149.7
C5 C4 N3 H4 180.0 179.6
N3 C4 C5 C6 1.9 0.2
N3 C4 C5 N8 180.1 180.0
C7 N3 C2 H21 298.0 344.0
C7 N3 C2 H22 62.3 104.2
C2 N3 C7 C4 181.0 180.2
C7 N3 C4 C5 178.1 148.4
C7 N3 C4 H4 358.1 328.8
H71 C7 N3 H72 120.0 240.0
H71 C7 N3 H73 240.1 120.0
H72 C7 N3 H73 120.0 240.0
C1 C6 C5 C4 358.5 15.7
C5 C4 N3 C7 178.1 148.4
N3 C4 C5 H4 180.0 180.4
C6 C5 C4 N8 181.9 180.2
C4 C5 C6 H6 178.5 195.7
C4 C5 N8 HN81 85.1 180.2
C4 C5 N8 HN82 325.1 0.2
H4 C4 N3 C7 358.1 328.8
N3 C4 H4 C5 180.0 179.6
H4 C4 C5 C6 181.9 179.8
H4 C4 C5 N8 0.0 359.6
C5 C6 C1 H1 182.0 180.3
C1 C6 C5 H6 180.0 179.9
C6 C5 C4 H4 181.9 179.8
C4 C5 C6 N8 178.1 179.8
C6 C5 N8 HN81 263.2 0.0
C6 C5 N8 HN82 143.2 180.0
N8 C5 C4 H4 0.0 359.6
C4 C5 N8 C6 181.9 180.2
N8 C5 C6 H6 0.4 15.9
HN81 N8 C5 HN82 120.0 180.1
H6 C6 C1 H1 2.0 0.3
C1 C6 H6 C5 180.0 180.1
H6 C6 C5 N8 0.4 15.9
N3 C7 H71 H72 240.0 120.0
N3 C7 H71 H73 120.0 240.0
H72 C7 H71 H73 240.0 120.0
N3 C7 H72 H71 120.0 240.0
N3 C7 H72 H73 240.0 120.0
H71 C7 H72 H73 120.0 239.9
N3 C7 H73 H71 240.0 119.9
N3 C7 H73 H72 120.0 240.0
H71 C7 H73 H72 240.0 120.1
C5 N8 HN81 HN82 240.0 179.9
C5 N8 HN82 HN81 120.0 180.1