PDB Chemical Component LF7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LF7
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O4 |
C3 |
1.425 |
1.429 |
| C6 |
C3 |
1.535 |
1.530 |
| C6 |
C7 |
1.541 |
1.530 |
| C3 |
C5 |
1.542 |
1.530 |
| C3 |
C21 |
1.529 |
1.531 |
| C5 |
C10 |
1.544 |
1.530 |
| N12 |
C7 |
1.476 |
1.469 |
| N12 |
C13 |
1.469 |
1.469 |
| C7 |
C9 |
1.538 |
1.531 |
| C7 |
C8 |
1.545 |
1.530 |
| C21 |
C1 |
1.531 |
1.530 |
| C9 |
C10 |
1.541 |
1.530 |
| C10 |
C2 |
1.534 |
1.530 |
| C13 |
C14 |
1.528 |
1.507 |
| O20 |
C14 |
1.234 |
1.213 |
| C8 |
C1 |
1.534 |
1.530 |
| C1 |
C2 |
1.542 |
1.530 |
| C14 |
N15 |
1.383 |
1.347 |
| N15 |
C16 |
1.482 |
1.470 |
| N15 |
C19 |
1.469 |
1.475 |
| C16 |
C20 |
1.503 |
1.506 |
| C16 |
C17 |
1.514 |
1.544 |
| C19 |
C18 |
1.520 |
1.548 |
| C20 |
N2 |
1.274 |
1.279 |
| C17 |
C18 |
1.521 |
1.551 |
| C19 |
H1 |
1.100 |
1.090 |
| C19 |
H2 |
1.100 |
1.090 |
| C18 |
H3 |
1.101 |
1.091 |
| C18 |
H4 |
1.100 |
1.090 |
| C17 |
H5 |
1.100 |
1.090 |
| C17 |
H6 |
1.100 |
1.089 |
| C16 |
H7 |
1.100 |
1.089 |
| C20 |
H8 |
1.080 |
1.081 |
| N2 |
H9 |
1.000 |
0.970 |
| C13 |
H10 |
1.100 |
1.090 |
| C13 |
H11 |
1.100 |
1.091 |
| N12 |
H12 |
1.000 |
1.008 |
| C8 |
H14 |
1.100 |
1.090 |
| C8 |
H15 |
1.100 |
1.090 |
| C1 |
H16 |
1.100 |
1.091 |
| C2 |
H17 |
1.100 |
1.090 |
| C2 |
H18 |
1.100 |
1.090 |
| C10 |
H19 |
1.100 |
1.090 |
| C9 |
H20 |
1.100 |
1.090 |
| C9 |
H21 |
1.099 |
1.090 |
| C5 |
H22 |
1.100 |
1.090 |
| C5 |
H23 |
1.100 |
1.090 |
| C21 |
H24 |
1.100 |
1.090 |
| C21 |
H25 |
1.099 |
1.090 |
| O4 |
H26 |
0.950 |
0.967 |
| C6 |
H27 |
1.100 |
1.091 |
| C6 |
H28 |
1.100 |
1.090 |
Bond Angles for LF7
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C5 |
H22 |
109.6 |
109.5 |
| C3 |
C5 |
H23 |
109.6 |
109.4 |
| C3 |
C21 |
H24 |
109.3 |
109.5 |
| C3 |
C21 |
H25 |
109.3 |
109.5 |
| C5 |
C10 |
H19 |
110.0 |
109.4 |
| N12 |
C7 |
C9 |
111.6 |
109.4 |
| N12 |
C7 |
C8 |
110.3 |
109.5 |
| C7 |
N12 |
H12 |
105.7 |
111.0 |
| N12 |
C13 |
H10 |
108.4 |
109.5 |
| N12 |
C13 |
H11 |
108.4 |
109.5 |
| C8 |
C7 |
C9 |
108.2 |
109.5 |
| C7 |
C9 |
C10 |
111.4 |
109.4 |
| C7 |
C9 |
H20 |
109.0 |
109.5 |
| C7 |
C9 |
H21 |
109.0 |
109.5 |
| C7 |
C8 |
C1 |
111.4 |
109.5 |
| C7 |
C8 |
H14 |
109.0 |
109.4 |
| C7 |
C8 |
H15 |
109.0 |
109.5 |
| C21 |
C1 |
H16 |
110.2 |
109.5 |
| C9 |
C10 |
H19 |
110.0 |
109.5 |
| C10 |
C2 |
H17 |
109.2 |
109.5 |
| C10 |
C2 |
H18 |
109.2 |
109.5 |
| O20 |
C14 |
N15 |
119.7 |
120.0 |
| C8 |
C1 |
C2 |
110.4 |
109.5 |
| C1 |
C8 |
H14 |
109.0 |
109.5 |
| C1 |
C8 |
H15 |
109.0 |
109.5 |
| C8 |
C1 |
H16 |
110.2 |
109.4 |
| C2 |
C1 |
H16 |
110.1 |
109.5 |
| C1 |
C2 |
H17 |
109.2 |
109.5 |
| C1 |
C2 |
H18 |
109.2 |
109.5 |
| C14 |
N15 |
C16 |
117.2 |
125.6 |
| C14 |
N15 |
C19 |
115.9 |
125.7 |
| C19 |
N15 |
C16 |
108.8 |
108.7 |
| N15 |
C16 |
C20 |
107.2 |
109.9 |
| N15 |
C16 |
C17 |
106.7 |
107.3 |
| N15 |
C16 |
H7 |
112.3 |
109.9 |
| N15 |
C19 |
C18 |
104.6 |
104.8 |
| N15 |
C19 |
H1 |
110.7 |
110.4 |
| N15 |
C19 |
H2 |
110.7 |
110.3 |
| C16 |
C20 |
N2 |
118.2 |
120.0 |
| C20 |
C16 |
H7 |
112.0 |
109.9 |
| C16 |
C20 |
H8 |
120.9 |
120.0 |
| C16 |
C17 |
H5 |
110.5 |
110.9 |
| C16 |
C17 |
H6 |
110.6 |
110.7 |
| C18 |
C19 |
H1 |
110.7 |
110.4 |
| C18 |
C19 |
H2 |
110.7 |
110.4 |
| C19 |
C18 |
H3 |
110.8 |
111.0 |
| C19 |
C18 |
H4 |
110.8 |
111.0 |
| N2 |
C20 |
H8 |
120.9 |
120.0 |
| C20 |
N2 |
H9 |
112.0 |
120.0 |
| C17 |
C18 |
H3 |
110.8 |
111.0 |
| C17 |
C18 |
H4 |
110.8 |
111.0 |
| H1 |
C19 |
H2 |
109.5 |
110.4 |
| H3 |
C18 |
H4 |
109.4 |
110.8 |
| H5 |
C17 |
H6 |
109.5 |
110.6 |
| H10 |
C13 |
H11 |
109.5 |
109.5 |
| H14 |
C8 |
H15 |
109.5 |
109.5 |
| H17 |
C2 |
H18 |
109.5 |
109.5 |
| H20 |
C9 |
H21 |
109.5 |
109.5 |
| H22 |
C5 |
H23 |
109.4 |
109.4 |
| H24 |
C21 |
H25 |
109.4 |
109.5 |
| H27 |
C6 |
H28 |
109.4 |
109.5 |
Torsion Angles for LF7
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O4 |
C3 |
C5 |
H22 |
296.4 |
59.9 |
| O4 |
C3 |
C5 |
H23 |
56.5 |
300.0 |
| O4 |
C3 |
C21 |
H24 |
299.5 |
60.0 |
| O4 |
C3 |
C21 |
H25 |
59.3 |
300.0 |
| C6 |
C3 |
C5 |
H22 |
57.8 |
180.0 |
| C6 |
C3 |
C5 |
H23 |
177.9 |
60.1 |
| C6 |
C3 |
C21 |
H24 |
180.4 |
300.0 |
| C6 |
C3 |
C21 |
H25 |
300.2 |
180.0 |
| C6 |
C7 |
N12 |
H12 |
314.6 |
303.9 |
| C6 |
C7 |
C9 |
H20 |
177.6 |
180.0 |
| C6 |
C7 |
C9 |
H21 |
297.0 |
300.0 |
| C6 |
C7 |
C8 |
H14 |
58.9 |
60.0 |
| C6 |
C7 |
C8 |
H15 |
178.4 |
180.0 |
| C3 |
C5 |
C10 |
H19 |
179.9 |
180.0 |
| H22 |
C5 |
C3 |
H23 |
239.9 |
119.9 |
| C21 |
C3 |
C5 |
H22 |
179.5 |
300.0 |
| C21 |
C3 |
C5 |
H23 |
299.6 |
180.0 |
| C3 |
C21 |
C1 |
H16 |
179.8 |
180.0 |
| H24 |
C21 |
C3 |
H25 |
240.2 |
120.1 |
| C9 |
C10 |
C5 |
H19 |
238.8 |
240.0 |
| C5 |
C10 |
C2 |
H17 |
179.4 |
300.0 |
| C5 |
C10 |
C2 |
H18 |
299.2 |
180.0 |
| C7 |
N12 |
C13 |
H10 |
210.1 |
60.0 |
| C7 |
N12 |
C13 |
H11 |
328.8 |
300.0 |
| C8 |
C7 |
N12 |
C9 |
239.7 |
240.0 |
| N12 |
C7 |
C9 |
C10 |
178.3 |
180.0 |
| N12 |
C7 |
C9 |
H20 |
298.6 |
300.0 |
| N12 |
C7 |
C9 |
H21 |
58.0 |
60.0 |
| N12 |
C7 |
C8 |
C1 |
178.9 |
180.0 |
| N12 |
C7 |
C8 |
H14 |
299.1 |
300.0 |
| N12 |
C7 |
C8 |
H15 |
58.5 |
60.0 |
| H10 |
C13 |
N12 |
H11 |
241.2 |
120.0 |
| N12 |
C7 |
C9 |
C8 |
238.5 |
240.0 |
| C9 |
C7 |
N12 |
H12 |
194.0 |
183.9 |
| C9 |
C7 |
C8 |
C1 |
56.5 |
60.0 |
| C9 |
C7 |
C8 |
H14 |
176.8 |
180.0 |
| C9 |
C7 |
C8 |
H15 |
296.2 |
300.0 |
| C7 |
C9 |
C10 |
H19 |
181.9 |
180.0 |
| H20 |
C9 |
C7 |
H21 |
240.6 |
240.0 |
| N12 |
C7 |
C8 |
C9 |
122.3 |
120.0 |
| C8 |
C7 |
N12 |
H12 |
73.7 |
64.0 |
| C8 |
C7 |
C9 |
C10 |
299.8 |
300.0 |
| C8 |
C7 |
C9 |
H20 |
60.1 |
60.0 |
| C8 |
C7 |
C9 |
H21 |
179.5 |
180.0 |
| C7 |
C8 |
C1 |
C2 |
303.8 |
300.0 |
| C1 |
C8 |
C7 |
H14 |
239.7 |
240.0 |
| C1 |
C8 |
C7 |
H15 |
120.3 |
120.0 |
| C7 |
C8 |
C1 |
H16 |
182.0 |
180.0 |
| H14 |
C8 |
C7 |
H15 |
240.6 |
240.0 |
| C21 |
C1 |
C8 |
H14 |
302.1 |
300.0 |
| C21 |
C1 |
C8 |
H15 |
182.6 |
180.0 |
| C8 |
C1 |
C21 |
H16 |
119.6 |
119.9 |
| C2 |
C1 |
C21 |
H16 |
238.9 |
240.0 |
| C21 |
C1 |
C2 |
H17 |
181.0 |
59.9 |
| C21 |
C1 |
C2 |
H18 |
61.4 |
180.0 |
| C5 |
C10 |
C9 |
H19 |
121.2 |
120.0 |
| C7 |
C9 |
C10 |
H20 |
120.3 |
120.0 |
| C7 |
C9 |
C10 |
H21 |
239.7 |
240.0 |
| C9 |
C10 |
C2 |
H17 |
60.2 |
180.0 |
| C9 |
C10 |
C2 |
H18 |
179.9 |
60.0 |
| C7 |
C9 |
C10 |
C2 |
62.1 |
60.0 |
| C10 |
C2 |
C1 |
H16 |
180.0 |
180.0 |
| C1 |
C2 |
C10 |
H17 |
239.8 |
120.0 |
| C1 |
C2 |
C10 |
H18 |
120.1 |
240.0 |
| H17 |
C2 |
C10 |
H18 |
240.3 |
120.0 |
| O20 |
C14 |
N15 |
C16 |
26.9 |
0.1 |
| O20 |
C14 |
N15 |
C19 |
157.7 |
180.3 |
| C1 |
C8 |
C7 |
C9 |
56.5 |
60.0 |
| C7 |
C8 |
C1 |
H14 |
120.3 |
120.0 |
| C7 |
C8 |
C1 |
H15 |
239.7 |
240.0 |
| C21 |
C1 |
C8 |
H16 |
240.4 |
240.0 |
| C2 |
C1 |
C8 |
H16 |
121.8 |
120.0 |
| C8 |
C1 |
C2 |
H17 |
298.0 |
180.0 |
| C8 |
C1 |
C2 |
H18 |
178.3 |
300.0 |
| H14 |
C8 |
C1 |
H15 |
119.4 |
120.0 |
| C21 |
C1 |
C2 |
H16 |
121.2 |
120.0 |
| C10 |
C2 |
C1 |
H17 |
120.2 |
240.0 |
| C10 |
C2 |
C1 |
H18 |
239.8 |
120.0 |
| C2 |
C1 |
C8 |
H14 |
183.5 |
180.0 |
| C2 |
C1 |
C8 |
H15 |
64.1 |
60.0 |
| C8 |
C1 |
C2 |
H16 |
238.1 |
240.1 |
| H17 |
C2 |
C1 |
H18 |
119.7 |
239.9 |
| C19 |
N15 |
C14 |
C16 |
130.8 |
180.2 |
| C14 |
N15 |
C16 |
C20 |
254.5 |
300.4 |
| C14 |
N15 |
C16 |
C17 |
140.9 |
180.9 |
| C14 |
N15 |
C16 |
H7 |
18.0 |
61.5 |
| C14 |
N15 |
C19 |
C18 |
200.6 |
155.9 |
| C14 |
N15 |
C19 |
H1 |
319.8 |
274.7 |
| C14 |
N15 |
C19 |
H2 |
81.4 |
37.0 |
| C14 |
N15 |
C16 |
C19 |
134.0 |
180.2 |
| C16 |
N15 |
C19 |
C18 |
335.3 |
336.1 |
| C16 |
N15 |
C19 |
H1 |
94.5 |
94.9 |
| C16 |
N15 |
C19 |
H2 |
216.1 |
217.2 |
| N15 |
C16 |
C20 |
N2 |
347.4 |
125.0 |
| C20 |
C16 |
N15 |
H7 |
236.6 |
238.9 |
| N15 |
C16 |
C20 |
H8 |
167.4 |
305.1 |
| N15 |
C16 |
C17 |
H5 |
133.1 |
264.1 |
| N15 |
C16 |
C17 |
H6 |
254.5 |
140.9 |
| C14 |
N15 |
C19 |
C16 |
225.3 |
179.8 |
| C19 |
N15 |
C16 |
C20 |
120.5 |
120.3 |
| C19 |
N15 |
C16 |
C17 |
6.9 |
0.7 |
| C19 |
N15 |
C16 |
H7 |
244.0 |
241.3 |
| C18 |
C19 |
N15 |
H1 |
240.8 |
241.1 |
| C18 |
C19 |
N15 |
H2 |
119.2 |
118.8 |
| N15 |
C19 |
C18 |
H3 |
151.8 |
155.1 |
| N15 |
C19 |
C18 |
H4 |
273.5 |
278.9 |
| H1 |
C19 |
N15 |
H2 |
238.4 |
237.7 |
| N15 |
C16 |
C20 |
C17 |
246.1 |
242.1 |
| N15 |
C16 |
C20 |
H7 |
123.6 |
121.1 |
| C20 |
C16 |
C17 |
H5 |
18.9 |
144.6 |
| C20 |
C16 |
C17 |
H6 |
140.3 |
21.4 |
| N2 |
C20 |
C16 |
H8 |
180.0 |
179.9 |
| C16 |
C20 |
N2 |
H9 |
180.0 |
180.1 |
| N15 |
C16 |
C17 |
C20 |
114.2 |
119.5 |
| N15 |
C16 |
C17 |
H7 |
236.8 |
240.6 |
| C16 |
C17 |
C18 |
H3 |
212.4 |
206.2 |
| C16 |
C17 |
C18 |
H4 |
90.7 |
82.5 |
| H5 |
C17 |
C16 |
H6 |
238.7 |
123.2 |
| C18 |
C19 |
N15 |
C16 |
335.3 |
336.1 |
| N15 |
C19 |
C18 |
H1 |
119.2 |
118.9 |
| N15 |
C19 |
C18 |
H2 |
240.8 |
241.2 |
| C17 |
C18 |
C19 |
H3 |
240.9 |
241.9 |
| C17 |
C18 |
C19 |
H4 |
119.2 |
118.2 |
| H1 |
C19 |
C18 |
H2 |
121.6 |
122.3 |
| H3 |
C18 |
C19 |
H4 |
238.3 |
236.2 |
| N2 |
C20 |
C16 |
H7 |
223.8 |
3.9 |
| C16 |
C20 |
N2 |
H8 |
180.0 |
180.1 |
| N15 |
C16 |
C17 |
C18 |
13.8 |
22.5 |
| C17 |
C18 |
C19 |
H1 |
273.5 |
278.2 |
| C17 |
C18 |
C19 |
H2 |
151.9 |
155.8 |
| C19 |
C18 |
C17 |
H3 |
119.2 |
118.1 |
| C19 |
C18 |
C17 |
H4 |
240.8 |
241.8 |
| H3 |
C18 |
C17 |
H4 |
121.7 |
123.7 |
| H1 |
C19 |
N15 |
C16 |
94.5 |
94.9 |
| N15 |
C19 |
H1 |
C18 |
244.5 |
244.6 |
| N15 |
C19 |
H1 |
H2 |
122.3 |
122.2 |
| C18 |
C19 |
H1 |
H2 |
237.7 |
237.7 |
| H1 |
C19 |
C18 |
H3 |
32.6 |
36.3 |
| H1 |
C19 |
C18 |
H4 |
154.3 |
160.0 |
| H2 |
C19 |
N15 |
C16 |
216.1 |
217.2 |
| N15 |
C19 |
H2 |
C18 |
115.5 |
115.4 |
| N15 |
C19 |
H2 |
H1 |
237.7 |
237.7 |
| C18 |
C19 |
H2 |
H1 |
122.3 |
122.3 |
| H2 |
C19 |
C18 |
H3 |
271.0 |
273.9 |
| H2 |
C19 |
C18 |
H4 |
32.7 |
37.7 |
| H3 |
C18 |
C19 |
H1 |
32.6 |
36.3 |
| H3 |
C18 |
C19 |
H2 |
271.0 |
273.9 |
| C19 |
C18 |
H3 |
H4 |
122.5 |
123.9 |
| C17 |
C18 |
H3 |
H4 |
237.5 |
236.1 |
| H4 |
C18 |
C19 |
H1 |
154.3 |
160.0 |
| H4 |
C18 |
C19 |
H2 |
32.7 |
37.7 |
| C19 |
C18 |
H4 |
H3 |
237.5 |
236.1 |
| C17 |
C18 |
H4 |
H3 |
122.5 |
123.8 |
| C16 |
C17 |
H5 |
H6 |
122.0 |
236.7 |
| H5 |
C17 |
C18 |
H3 |
93.1 |
324.7 |
| H5 |
C17 |
C18 |
H4 |
331.4 |
201.0 |
| C16 |
C17 |
H6 |
H5 |
238.0 |
123.3 |
| H6 |
C17 |
C18 |
H3 |
331.7 |
87.8 |
| H6 |
C17 |
C18 |
H4 |
210.0 |
324.1 |
| N15 |
C16 |
H7 |
C20 |
239.3 |
238.9 |
| N15 |
C16 |
H7 |
C17 |
120.0 |
117.8 |
| H7 |
C16 |
C20 |
N2 |
223.8 |
3.9 |
| H7 |
C16 |
C20 |
H8 |
43.8 |
184.0 |
| H7 |
C16 |
C17 |
H5 |
256.3 |
23.5 |
| H7 |
C16 |
C17 |
H6 |
17.7 |
260.3 |
| C16 |
C20 |
H8 |
N2 |
180.0 |
179.9 |
| H8 |
C20 |
C16 |
H7 |
43.8 |
184.0 |
| H8 |
C20 |
N2 |
H9 |
0.0 |
360.0 |
| H9 |
N2 |
C20 |
H8 |
0.0 |
360.0 |
| N12 |
C13 |
H10 |
H11 |
118.1 |
240.0 |
| N12 |
C13 |
H11 |
H10 |
241.9 |
120.0 |
| H12 |
N12 |
C7 |
C9 |
194.0 |
183.9 |
| H12 |
N12 |
C7 |
C8 |
73.7 |
64.0 |
| H12 |
N12 |
C13 |
H10 |
88.1 |
296.1 |
| H12 |
N12 |
C13 |
H11 |
206.8 |
176.0 |
| H14 |
C8 |
C7 |
C9 |
176.8 |
180.0 |
| C7 |
C8 |
H14 |
C1 |
238.2 |
240.0 |
| C7 |
C8 |
H14 |
H15 |
119.1 |
120.0 |
| H14 |
C8 |
C1 |
C2 |
183.5 |
180.0 |
| C1 |
C8 |
H14 |
H15 |
240.9 |
240.0 |
| H14 |
C8 |
C1 |
H16 |
61.7 |
60.0 |
| H15 |
C8 |
C7 |
C9 |
296.2 |
300.0 |
| C7 |
C8 |
H15 |
C1 |
121.8 |
120.0 |
| C7 |
C8 |
H15 |
H14 |
240.9 |
240.0 |
| H15 |
C8 |
C1 |
C2 |
64.1 |
60.0 |
| C1 |
C8 |
H15 |
H14 |
119.1 |
120.0 |
| H15 |
C8 |
C1 |
H16 |
302.3 |
300.0 |
| C8 |
C1 |
H16 |
C2 |
122.0 |
120.0 |
| H16 |
C1 |
C8 |
H14 |
61.7 |
60.0 |
| H16 |
C1 |
C8 |
H15 |
302.3 |
300.0 |
| H16 |
C1 |
C2 |
H17 |
59.9 |
299.9 |
| H16 |
C1 |
C2 |
H18 |
300.2 |
60.0 |
| C10 |
C2 |
H17 |
H18 |
119.5 |
240.0 |
| H17 |
C2 |
C1 |
H16 |
59.9 |
299.9 |
| C1 |
C2 |
H17 |
H18 |
240.5 |
120.0 |
| C10 |
C2 |
H18 |
H17 |
240.5 |
120.0 |
| H18 |
C2 |
C1 |
H16 |
300.2 |
60.0 |
| C1 |
C2 |
H18 |
H17 |
119.5 |
240.0 |
| H19 |
C10 |
C2 |
H17 |
300.5 |
60.0 |
| H19 |
C10 |
C2 |
H18 |
60.2 |
300.0 |
| C7 |
C9 |
H20 |
C10 |
238.2 |
240.0 |
| C7 |
C9 |
H20 |
H21 |
119.1 |
120.0 |
| H20 |
C9 |
C10 |
H19 |
61.6 |
60.0 |
| C7 |
C9 |
H21 |
C10 |
121.8 |
120.0 |
| C7 |
C9 |
H21 |
H20 |
240.9 |
240.0 |
| H21 |
C9 |
C10 |
H19 |
302.2 |
300.0 |
| C3 |
C5 |
H22 |
H23 |
120.2 |
240.1 |
| H22 |
C5 |
C10 |
H19 |
60.0 |
300.0 |
| C3 |
C5 |
H23 |
H22 |
239.8 |
120.0 |
| H23 |
C5 |
C10 |
H19 |
299.8 |
60.0 |
| C3 |
C21 |
H24 |
H25 |
119.7 |
240.0 |
| H24 |
C21 |
C1 |
H16 |
59.7 |
300.0 |
| C3 |
C21 |
H25 |
H24 |
240.3 |
120.1 |
| H25 |
C21 |
C1 |
H16 |
299.9 |
60.1 |