PDB Chemical Component LEU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LEU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.491 |
1.469 |
| N |
H |
1.019 |
1.008 |
| N |
H2 |
1.020 |
1.008 |
| CA |
C |
1.515 |
1.506 |
| CA |
CB |
1.539 |
1.529 |
| CA |
HA |
1.115 |
1.089 |
| C |
O |
1.222 |
1.208 |
| C |
OXT |
1.228 |
1.343 |
| CB |
CG |
1.526 |
1.530 |
| CB |
HB2 |
1.116 |
1.090 |
| CB |
HB3 |
1.116 |
1.090 |
| CG |
CD1 |
1.552 |
1.530 |
| CG |
CD2 |
1.549 |
1.529 |
| CG |
HG |
1.116 |
1.090 |
| CD1 |
HD11 |
1.114 |
1.089 |
| CD1 |
HD12 |
1.115 |
1.090 |
| CD1 |
HD13 |
1.115 |
1.090 |
| CD2 |
HD21 |
1.114 |
1.090 |
| CD2 |
HD22 |
1.115 |
1.090 |
| CD2 |
HD23 |
1.116 |
1.090 |
| OXT |
HXT |
0.950 |
0.966 |
Bond Angles for LEU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
112.8 |
106.8 |
| CA |
N |
H2 |
111.0 |
106.7 |
| N |
CA |
C |
112.8 |
109.4 |
| N |
CA |
CB |
111.4 |
109.4 |
| N |
CA |
HA |
105.2 |
109.5 |
| H |
N |
H2 |
111.0 |
106.7 |
| C |
CA |
CB |
107.4 |
109.5 |
| C |
CA |
HA |
109.3 |
109.5 |
| CA |
C |
O |
116.0 |
120.1 |
| CA |
C |
OXT |
123.3 |
120.0 |
| CB |
CA |
HA |
110.8 |
109.5 |
| CA |
CB |
CG |
121.2 |
109.5 |
| CA |
CB |
HB2 |
108.0 |
109.5 |
| CA |
CB |
HB3 |
108.0 |
109.5 |
| O |
C |
OXT |
120.7 |
119.9 |
| C |
OXT |
HXT |
123.3 |
120.0 |
| CG |
CB |
HB2 |
108.1 |
109.4 |
| CG |
CB |
HB3 |
108.0 |
109.5 |
| CB |
CG |
CD1 |
108.6 |
109.5 |
| CB |
CG |
CD2 |
108.5 |
109.5 |
| CB |
CG |
HG |
112.0 |
109.4 |
| HB2 |
CB |
HB3 |
101.8 |
109.4 |
| CD1 |
CG |
CD2 |
113.2 |
109.5 |
| CD1 |
CG |
HG |
107.3 |
109.4 |
| CG |
CD1 |
HD11 |
108.5 |
109.5 |
| CG |
CD1 |
HD12 |
112.5 |
109.5 |
| CG |
CD1 |
HD13 |
112.5 |
109.4 |
| CD2 |
CG |
HG |
107.4 |
109.5 |
| CG |
CD2 |
HD21 |
108.5 |
109.4 |
| CG |
CD2 |
HD22 |
112.6 |
109.5 |
| CG |
CD2 |
HD23 |
112.6 |
109.5 |
| HD11 |
CD1 |
HD12 |
112.6 |
109.6 |
| HD11 |
CD1 |
HD13 |
112.6 |
109.4 |
| HD12 |
CD1 |
HD13 |
97.9 |
109.4 |
| HD21 |
CD2 |
HD22 |
112.6 |
109.5 |
| HD21 |
CD2 |
HD23 |
112.6 |
109.5 |
| HD22 |
CD2 |
HD23 |
97.8 |
109.5 |
Torsion Angles for LEU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.3 |
246.1 |
| C |
CA |
N |
CB |
120.8 |
120.0 |
| C |
CA |
N |
HA |
240.9 |
239.9 |
| N |
CA |
C |
O |
158.9 |
330.0 |
| N |
CA |
C |
OXT |
340.9 |
150.0 |
| CB |
CA |
N |
HA |
120.1 |
120.0 |
| N |
CA |
CB |
CG |
290.9 |
299.9 |
| N |
CA |
CB |
HB2 |
56.2 |
180.0 |
| N |
CA |
CB |
HB3 |
165.6 |
60.0 |
| CA |
N |
H |
H2 |
234.7 |
113.8 |
| H |
N |
CA |
C |
180.0 |
60.0 |
| H |
N |
CA |
CB |
59.2 |
300.0 |
| H |
N |
CA |
HA |
299.1 |
180.0 |
| CA |
N |
H2 |
H |
126.3 |
246.1 |
| H2 |
N |
CA |
C |
54.7 |
173.8 |
| H2 |
N |
CA |
CB |
293.9 |
53.8 |
| H2 |
N |
CA |
HA |
173.8 |
293.9 |
| C |
CA |
N |
H |
180.0 |
60.0 |
| C |
CA |
N |
H2 |
54.7 |
173.8 |
| N |
CA |
C |
CB |
236.9 |
240.1 |
| N |
CA |
C |
HA |
116.6 |
120.0 |
| CB |
CA |
C |
HA |
239.7 |
239.9 |
| C |
CA |
CB |
CG |
167.0 |
180.0 |
| C |
CA |
CB |
HB2 |
292.3 |
60.0 |
| C |
CA |
CB |
HB3 |
41.7 |
300.1 |
| O |
C |
CA |
OXT |
178.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
N |
H |
59.2 |
300.0 |
| CB |
CA |
N |
H2 |
293.9 |
53.8 |
| N |
CA |
CB |
C |
123.9 |
119.9 |
| N |
CA |
CB |
HA |
243.3 |
240.0 |
| C |
CA |
CB |
HA |
119.3 |
120.1 |
| CB |
CA |
C |
O |
281.9 |
89.9 |
| CB |
CA |
C |
OXT |
103.9 |
270.0 |
| CG |
CB |
CA |
HB2 |
234.7 |
120.0 |
| CG |
CB |
CA |
HB3 |
125.3 |
239.9 |
| CA |
CB |
CG |
CD1 |
327.2 |
180.0 |
| CA |
CB |
CG |
CD2 |
90.6 |
300.1 |
| CA |
CB |
CG |
HG |
208.9 |
60.1 |
| HB2 |
CB |
CA |
HB3 |
250.6 |
120.0 |
| HA |
CA |
N |
H |
299.1 |
180.0 |
| HA |
CA |
N |
H2 |
173.8 |
293.9 |
| N |
CA |
HA |
C |
238.7 |
240.0 |
| N |
CA |
HA |
CB |
120.5 |
119.9 |
| C |
CA |
HA |
CB |
241.8 |
239.9 |
| HA |
CA |
C |
O |
42.2 |
210.0 |
| HA |
CA |
C |
OXT |
224.2 |
30.0 |
| HA |
CA |
CB |
CG |
47.7 |
59.9 |
| HA |
CA |
CB |
HB2 |
173.0 |
299.9 |
| HA |
CA |
CB |
HB3 |
282.4 |
180.0 |
| O |
C |
CA |
CB |
281.9 |
89.9 |
| O |
C |
CA |
HA |
42.2 |
210.0 |
| CA |
C |
O |
OXT |
181.9 |
180.0 |
| O |
C |
OXT |
HXT |
2.1 |
0.0 |
| OXT |
C |
CA |
CB |
103.9 |
270.0 |
| OXT |
C |
CA |
HA |
224.2 |
30.0 |
| CA |
C |
OXT |
O |
177.9 |
180.0 |
| CG |
CB |
CA |
HA |
47.7 |
59.9 |
| CA |
CB |
CG |
HB2 |
125.3 |
240.0 |
| CA |
CB |
CG |
HB3 |
234.7 |
120.1 |
| HB2 |
CB |
CG |
HB3 |
109.5 |
240.1 |
| CD1 |
CG |
CB |
CD2 |
236.7 |
239.9 |
| CD1 |
CG |
CB |
HG |
118.3 |
119.9 |
| CB |
CG |
CD1 |
HD11 |
180.0 |
180.0 |
| CB |
CG |
CD1 |
HD12 |
305.3 |
300.1 |
| CB |
CG |
CD1 |
HD13 |
54.7 |
60.0 |
| CD2 |
CG |
CB |
HG |
241.7 |
240.0 |
| CB |
CG |
CD2 |
HD21 |
180.0 |
299.9 |
| CB |
CG |
CD2 |
HD22 |
305.3 |
59.9 |
| CB |
CG |
CD2 |
HD23 |
54.7 |
180.0 |
| HB2 |
CB |
CA |
HA |
173.0 |
299.9 |
| CA |
CB |
HB2 |
CG |
227.2 |
120.0 |
| CA |
CB |
HB2 |
HB3 |
113.6 |
240.0 |
| CG |
CB |
HB2 |
HB3 |
246.3 |
120.0 |
| HB2 |
CB |
CG |
CD1 |
201.9 |
300.0 |
| HB2 |
CB |
CG |
CD2 |
325.3 |
60.1 |
| HB2 |
CB |
CG |
HG |
83.6 |
180.1 |
| HB3 |
CB |
CA |
HA |
282.4 |
180.0 |
| CA |
CB |
HB3 |
CG |
132.7 |
239.9 |
| CA |
CB |
HB3 |
HB2 |
246.4 |
120.0 |
| CG |
CB |
HB3 |
HB2 |
113.7 |
240.1 |
| HB3 |
CB |
CG |
CD1 |
92.5 |
59.9 |
| HB3 |
CB |
CG |
CD2 |
215.8 |
180.0 |
| HB3 |
CB |
CG |
HG |
334.2 |
300.0 |
| CD1 |
CG |
CB |
HB2 |
201.9 |
300.0 |
| CD1 |
CG |
CB |
HB3 |
92.5 |
59.9 |
| CB |
CG |
CD1 |
CD2 |
120.5 |
120.1 |
| CB |
CG |
CD1 |
HG |
238.7 |
240.1 |
| CD2 |
CG |
CD1 |
HG |
118.3 |
120.0 |
| CD1 |
CG |
CD2 |
HD21 |
300.5 |
60.0 |
| CD1 |
CG |
CD2 |
HD22 |
65.8 |
180.0 |
| CD1 |
CG |
CD2 |
HD23 |
175.2 |
300.1 |
| HD11 |
CD1 |
CG |
HD12 |
234.7 |
239.9 |
| HD11 |
CD1 |
CG |
HD13 |
125.3 |
119.9 |
| HD12 |
CD1 |
CG |
HD13 |
250.6 |
240.1 |
| CD2 |
CG |
CB |
HB2 |
325.3 |
60.1 |
| CD2 |
CG |
CB |
HB3 |
215.8 |
180.0 |
| CB |
CG |
CD2 |
CD1 |
239.5 |
239.9 |
| CB |
CG |
CD2 |
HG |
121.3 |
120.0 |
| CD1 |
CG |
CD2 |
HG |
241.8 |
240.1 |
| CD2 |
CG |
CD1 |
HD11 |
59.5 |
59.9 |
| CD2 |
CG |
CD1 |
HD12 |
184.8 |
180.0 |
| CD2 |
CG |
CD1 |
HD13 |
294.2 |
300.0 |
| HD21 |
CD2 |
CG |
HD22 |
234.7 |
240.0 |
| HD21 |
CD2 |
CG |
HD23 |
125.2 |
120.0 |
| HD22 |
CD2 |
CG |
HD23 |
250.5 |
240.0 |
| HG |
CG |
CB |
HB2 |
83.6 |
180.1 |
| HG |
CG |
CB |
HB3 |
334.2 |
300.0 |
| CB |
CG |
HG |
CD1 |
119.1 |
119.9 |
| CB |
CG |
HG |
CD2 |
241.0 |
240.0 |
| CD1 |
CG |
HG |
CD2 |
122.0 |
120.0 |
| HG |
CG |
CD1 |
HD11 |
301.3 |
299.9 |
| HG |
CG |
CD1 |
HD12 |
66.6 |
60.0 |
| HG |
CG |
CD1 |
HD13 |
176.0 |
179.9 |
| HG |
CG |
CD2 |
HD21 |
58.7 |
180.0 |
| HG |
CG |
CD2 |
HD22 |
184.0 |
300.0 |
| HG |
CG |
CD2 |
HD23 |
293.5 |
60.0 |
| HD11 |
CD1 |
CG |
CD2 |
59.5 |
59.9 |
| HD11 |
CD1 |
CG |
HG |
301.3 |
299.9 |
| CG |
CD1 |
HD11 |
HD12 |
125.2 |
120.1 |
| CG |
CD1 |
HD11 |
HD13 |
234.7 |
240.0 |
| HD12 |
CD1 |
HD11 |
HD13 |
109.5 |
119.9 |
| HD12 |
CD1 |
CG |
CD2 |
184.8 |
180.0 |
| HD12 |
CD1 |
CG |
HG |
66.6 |
60.0 |
| CG |
CD1 |
HD12 |
HD11 |
237.0 |
239.9 |
| CG |
CD1 |
HD12 |
HD13 |
118.4 |
119.9 |
| HD11 |
CD1 |
HD12 |
HD13 |
241.4 |
240.1 |
| HD13 |
CD1 |
CG |
CD2 |
294.2 |
300.0 |
| HD13 |
CD1 |
CG |
HG |
176.0 |
179.9 |
| CG |
CD1 |
HD13 |
HD11 |
123.0 |
120.0 |
| CG |
CD1 |
HD13 |
HD12 |
241.6 |
240.0 |
| HD11 |
CD1 |
HD13 |
HD12 |
118.5 |
120.0 |
| HD21 |
CD2 |
CG |
HG |
58.7 |
180.0 |
| CG |
CD2 |
HD21 |
HD22 |
125.3 |
120.0 |
| CG |
CD2 |
HD21 |
HD23 |
234.7 |
240.0 |
| HD22 |
CD2 |
HD21 |
HD23 |
109.5 |
120.0 |
| HD22 |
CD2 |
CG |
HG |
184.0 |
300.0 |
| CG |
CD2 |
HD22 |
HD21 |
237.0 |
240.0 |
| CG |
CD2 |
HD22 |
HD23 |
118.5 |
120.0 |
| HD21 |
CD2 |
HD22 |
HD23 |
241.5 |
240.0 |
| HD23 |
CD2 |
CG |
HG |
293.5 |
60.0 |
| CG |
CD2 |
HD23 |
HD21 |
123.0 |
119.9 |
| CG |
CD2 |
HD23 |
HD22 |
241.5 |
240.0 |
| HD21 |
CD2 |
HD23 |
HD22 |
118.5 |
120.0 |