PDB Chemical Component LEN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LEN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CD2 |
CG |
1.511 |
1.530 |
| CD2 |
HD21 |
1.101 |
1.090 |
| CD2 |
HD22 |
1.100 |
1.090 |
| CD2 |
HD23 |
1.100 |
1.091 |
| CG |
CD1 |
1.505 |
1.530 |
| CG |
CB |
1.528 |
1.530 |
| CG |
HG |
1.100 |
1.090 |
| CD1 |
HD11 |
1.100 |
1.090 |
| CD1 |
HD12 |
1.100 |
1.091 |
| CD1 |
HD13 |
1.100 |
1.090 |
| CB |
CA |
1.551 |
1.529 |
| CB |
HB1 |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| CA |
N |
1.545 |
1.469 |
| CA |
HA |
1.100 |
1.090 |
| CA |
HA2 |
1.100 |
1.090 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
Bond Angles for LEN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CG |
CD2 |
HD21 |
109.5 |
109.5 |
| CG |
CD2 |
HD22 |
109.5 |
109.5 |
| CG |
CD2 |
HD23 |
109.5 |
109.5 |
| CD2 |
CG |
CD1 |
107.3 |
109.4 |
| CD2 |
CG |
CB |
111.2 |
109.4 |
| CD2 |
CG |
HG |
108.8 |
109.5 |
| HD21 |
CD2 |
HD22 |
109.5 |
109.5 |
| HD21 |
CD2 |
HD23 |
109.4 |
109.5 |
| HD22 |
CD2 |
HD23 |
109.5 |
109.5 |
| CD1 |
CG |
CB |
106.3 |
109.5 |
| CD1 |
CG |
HG |
113.5 |
109.5 |
| CG |
CD1 |
HD11 |
109.5 |
109.5 |
| CG |
CD1 |
HD12 |
109.4 |
109.4 |
| CG |
CD1 |
HD13 |
109.5 |
109.5 |
| CB |
CG |
HG |
109.8 |
109.5 |
| CG |
CB |
CA |
109.6 |
109.5 |
| CG |
CB |
HB1 |
109.4 |
109.4 |
| CG |
CB |
HB2 |
109.4 |
109.5 |
| HD11 |
CD1 |
HD12 |
109.5 |
109.5 |
| HD11 |
CD1 |
HD13 |
109.5 |
109.5 |
| HD12 |
CD1 |
HD13 |
109.5 |
109.4 |
| CA |
CB |
HB1 |
109.4 |
109.5 |
| CA |
CB |
HB2 |
109.4 |
109.5 |
| CB |
CA |
N |
106.3 |
109.5 |
| CB |
CA |
HA |
110.5 |
109.5 |
| CB |
CA |
HA2 |
110.5 |
109.5 |
| HB1 |
CB |
HB2 |
109.5 |
109.5 |
| N |
CA |
HA |
110.6 |
109.5 |
| N |
CA |
HA2 |
110.5 |
109.4 |
| CA |
N |
H |
109.5 |
110.9 |
| CA |
N |
H2 |
109.5 |
111.0 |
| HA |
CA |
HA2 |
108.4 |
109.4 |
| H |
N |
H2 |
109.5 |
111.0 |
Torsion Angles for LEN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| HD21 |
CD2 |
CG |
HD22 |
240.0 |
240.0 |
| HD21 |
CD2 |
CG |
HD23 |
120.0 |
120.0 |
| HD22 |
CD2 |
CG |
HD23 |
240.0 |
240.0 |
| CD1 |
CG |
CD2 |
CB |
244.2 |
240.0 |
| CD1 |
CG |
CD2 |
HG |
123.1 |
120.0 |
| CD2 |
CG |
CD1 |
HD11 |
180.0 |
60.0 |
| CD2 |
CG |
CD1 |
HD12 |
300.0 |
180.0 |
| CD2 |
CG |
CD1 |
HD13 |
60.0 |
299.9 |
| CB |
CG |
CD2 |
HG |
239.0 |
240.0 |
| CD2 |
CG |
CB |
CA |
184.8 |
65.0 |
| CD2 |
CG |
CB |
HB1 |
304.8 |
185.0 |
| CD2 |
CG |
CB |
HB2 |
64.8 |
305.0 |
| CG |
CD2 |
HD21 |
HD22 |
120.0 |
120.0 |
| CG |
CD2 |
HD21 |
HD23 |
240.0 |
240.0 |
| HD21 |
CD2 |
CG |
CD1 |
180.0 |
180.0 |
| HD21 |
CD2 |
CG |
CB |
295.8 |
300.0 |
| HD21 |
CD2 |
CG |
HG |
56.9 |
60.0 |
| HD22 |
CD2 |
HD21 |
HD23 |
120.0 |
120.0 |
| CG |
CD2 |
HD22 |
HD21 |
240.0 |
240.0 |
| CG |
CD2 |
HD22 |
HD23 |
120.0 |
120.0 |
| HD22 |
CD2 |
CG |
CD1 |
300.0 |
300.0 |
| HD22 |
CD2 |
CG |
CB |
55.8 |
60.0 |
| HD22 |
CD2 |
CG |
HG |
176.9 |
180.0 |
| HD21 |
CD2 |
HD22 |
HD23 |
240.0 |
240.0 |
| CG |
CD2 |
HD23 |
HD21 |
120.0 |
120.0 |
| CG |
CD2 |
HD23 |
HD22 |
240.0 |
240.0 |
| HD23 |
CD2 |
CG |
CD1 |
60.0 |
60.0 |
| HD23 |
CD2 |
CG |
CB |
175.8 |
180.0 |
| HD23 |
CD2 |
CG |
HG |
296.9 |
300.0 |
| HD21 |
CD2 |
HD23 |
HD22 |
120.0 |
120.0 |
| CD1 |
CG |
CD2 |
HD21 |
180.0 |
180.0 |
| CD1 |
CG |
CD2 |
HD22 |
300.0 |
300.0 |
| CD1 |
CG |
CD2 |
HD23 |
60.0 |
60.0 |
| CD2 |
CG |
CD1 |
CB |
119.0 |
119.9 |
| CD2 |
CG |
CD1 |
HG |
239.8 |
240.0 |
| CB |
CG |
CD1 |
HG |
120.8 |
120.0 |
| CD1 |
CG |
CB |
CA |
301.2 |
185.0 |
| CD1 |
CG |
CB |
HB1 |
61.2 |
305.0 |
| CD1 |
CG |
CB |
HB2 |
181.2 |
65.0 |
| HD11 |
CD1 |
CG |
HD12 |
240.0 |
240.0 |
| HD11 |
CD1 |
CG |
HD13 |
120.0 |
120.0 |
| HD12 |
CD1 |
CG |
HD13 |
240.0 |
240.0 |
| CB |
CG |
CD2 |
HD21 |
295.8 |
300.0 |
| CB |
CG |
CD2 |
HD22 |
55.8 |
60.0 |
| CB |
CG |
CD2 |
HD23 |
175.8 |
180.0 |
| CD2 |
CG |
CB |
CD1 |
243.6 |
240.0 |
| CD2 |
CG |
CB |
HG |
120.5 |
120.0 |
| CD1 |
CG |
CB |
HG |
236.9 |
239.9 |
| CB |
CG |
CD1 |
HD11 |
61.0 |
300.0 |
| CB |
CG |
CD1 |
HD12 |
181.0 |
60.0 |
| CB |
CG |
CD1 |
HD13 |
301.0 |
180.0 |
| CA |
CB |
CG |
HB1 |
240.0 |
240.0 |
| CA |
CB |
CG |
HB2 |
120.0 |
120.0 |
| CG |
CB |
CA |
N |
295.0 |
180.0 |
| CG |
CB |
CA |
HA |
55.0 |
300.0 |
| CG |
CB |
CA |
HA2 |
175.0 |
60.0 |
| HB1 |
CB |
CG |
HB2 |
240.0 |
240.0 |
| HG |
CG |
CD2 |
HD21 |
56.9 |
60.0 |
| HG |
CG |
CD2 |
HD22 |
176.9 |
180.0 |
| HG |
CG |
CD2 |
HD23 |
296.9 |
300.0 |
| CD2 |
CG |
HG |
CD1 |
119.4 |
120.0 |
| CD2 |
CG |
HG |
CB |
238.1 |
240.0 |
| CD1 |
CG |
HG |
CB |
118.8 |
120.1 |
| HG |
CG |
CD1 |
HD11 |
300.2 |
180.0 |
| HG |
CG |
CD1 |
HD12 |
60.2 |
300.0 |
| HG |
CG |
CD1 |
HD13 |
180.2 |
60.0 |
| HG |
CG |
CB |
CA |
64.3 |
305.0 |
| HG |
CG |
CB |
HB1 |
184.3 |
65.0 |
| HG |
CG |
CB |
HB2 |
304.3 |
185.0 |
| HD11 |
CD1 |
CG |
CB |
61.0 |
300.0 |
| HD11 |
CD1 |
CG |
HG |
300.2 |
180.0 |
| CG |
CD1 |
HD11 |
HD12 |
120.0 |
120.0 |
| CG |
CD1 |
HD11 |
HD13 |
240.0 |
239.9 |
| HD12 |
CD1 |
HD11 |
HD13 |
120.0 |
120.0 |
| HD12 |
CD1 |
CG |
CB |
181.0 |
60.0 |
| HD12 |
CD1 |
CG |
HG |
60.2 |
300.0 |
| CG |
CD1 |
HD12 |
HD11 |
240.0 |
240.0 |
| CG |
CD1 |
HD12 |
HD13 |
120.0 |
120.0 |
| HD11 |
CD1 |
HD12 |
HD13 |
240.0 |
240.0 |
| HD13 |
CD1 |
CG |
CB |
301.0 |
180.0 |
| HD13 |
CD1 |
CG |
HG |
180.2 |
60.0 |
| CG |
CD1 |
HD13 |
HD11 |
120.0 |
120.0 |
| CG |
CD1 |
HD13 |
HD12 |
240.0 |
240.1 |
| HD11 |
CD1 |
HD13 |
HD12 |
120.0 |
120.0 |
| CA |
CB |
CG |
HG |
64.3 |
305.0 |
| CG |
CB |
CA |
HB1 |
120.0 |
120.0 |
| CG |
CB |
CA |
HB2 |
240.0 |
240.0 |
| HB1 |
CB |
CA |
HB2 |
120.0 |
120.0 |
| N |
CA |
CB |
HA |
240.0 |
239.9 |
| N |
CA |
CB |
HA2 |
120.0 |
120.0 |
| CB |
CA |
N |
H |
180.0 |
56.0 |
| CB |
CA |
N |
H2 |
300.0 |
180.0 |
| HA |
CA |
CB |
HA2 |
240.0 |
240.0 |
| HB1 |
CB |
CG |
HG |
184.3 |
65.0 |
| CG |
CB |
HB1 |
CA |
239.9 |
240.0 |
| CG |
CB |
HB1 |
HB2 |
119.9 |
120.0 |
| CA |
CB |
HB1 |
HB2 |
240.1 |
240.0 |
| HB1 |
CB |
CA |
N |
175.0 |
60.0 |
| HB1 |
CB |
CA |
HA |
295.0 |
180.0 |
| HB1 |
CB |
CA |
HA2 |
55.0 |
300.0 |
| HB2 |
CB |
CG |
HG |
304.3 |
185.0 |
| CG |
CB |
HB2 |
CA |
120.1 |
120.0 |
| CG |
CB |
HB2 |
HB1 |
240.1 |
240.0 |
| CA |
CB |
HB2 |
HB1 |
119.9 |
120.0 |
| HB2 |
CB |
CA |
N |
55.0 |
300.0 |
| HB2 |
CB |
CA |
HA |
175.0 |
60.0 |
| HB2 |
CB |
CA |
HA2 |
295.0 |
180.0 |
| N |
CA |
CB |
HB1 |
175.0 |
60.0 |
| N |
CA |
CB |
HB2 |
55.0 |
300.0 |
| CB |
CA |
N |
HA |
120.0 |
120.1 |
| CB |
CA |
N |
HA2 |
240.0 |
240.0 |
| HA |
CA |
N |
HA2 |
120.0 |
119.9 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| HA |
CA |
CB |
HB1 |
295.0 |
180.0 |
| HA |
CA |
CB |
HB2 |
175.0 |
60.0 |
| CB |
CA |
HA |
N |
242.6 |
239.9 |
| CB |
CA |
HA |
HA2 |
121.3 |
120.0 |
| N |
CA |
HA |
HA2 |
238.7 |
240.1 |
| HA |
CA |
N |
H |
60.0 |
296.0 |
| HA |
CA |
N |
H2 |
180.0 |
59.9 |
| HA2 |
CA |
CB |
HB1 |
55.0 |
300.0 |
| HA2 |
CA |
CB |
HB2 |
295.0 |
180.0 |
| CB |
CA |
HA2 |
N |
117.4 |
120.0 |
| CB |
CA |
HA2 |
HA |
238.7 |
240.0 |
| N |
CA |
HA2 |
HA |
121.3 |
120.0 |
| HA2 |
CA |
N |
H |
300.0 |
176.0 |
| HA2 |
CA |
N |
H2 |
60.0 |
300.0 |
| H |
N |
CA |
HA |
60.0 |
296.0 |
| H |
N |
CA |
HA2 |
300.0 |
176.0 |
| CA |
N |
H |
H2 |
120.0 |
124.0 |
| H2 |
N |
CA |
HA |
180.0 |
59.9 |
| H2 |
N |
CA |
HA2 |
60.0 |
300.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |