PDB Chemical Component LE1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LE1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O |
C |
1.235 |
1.208 |
| C |
OXT |
1.430 |
1.343 |
| CA |
C |
1.504 |
1.506 |
| CA |
CB |
1.540 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| N |
CA |
1.473 |
1.469 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CB |
C9 |
1.512 |
1.530 |
| CB |
C8 |
1.513 |
1.530 |
| C9 |
H9 |
1.100 |
1.091 |
| C9 |
H9A |
1.100 |
1.090 |
| C9 |
H9B |
1.101 |
1.089 |
| C8 |
H8 |
1.100 |
1.090 |
| C8 |
H8A |
1.100 |
1.090 |
| C8 |
H8B |
1.100 |
1.089 |
| SG |
CB |
1.782 |
1.814 |
| SG |
HSG |
1.300 |
1.345 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for LE1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
OXT |
120.3 |
120.0 |
| CA |
C |
OXT |
120.3 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CB |
CA |
HA |
107.2 |
109.5 |
| N |
CA |
CB |
112.3 |
109.5 |
| CA |
CB |
C9 |
109.6 |
109.5 |
| CA |
CB |
C8 |
111.5 |
109.5 |
| N |
CA |
HA |
106.4 |
109.4 |
| H |
N |
H2 |
109.5 |
111.0 |
| C9 |
CB |
C8 |
110.3 |
109.5 |
| CB |
C9 |
H9 |
109.5 |
109.5 |
| CB |
C9 |
H9A |
109.5 |
109.5 |
| CB |
C9 |
H9B |
109.5 |
109.5 |
| CB |
C8 |
H8 |
109.5 |
109.4 |
| CB |
C8 |
H8A |
109.5 |
109.5 |
| CB |
C8 |
H8B |
109.5 |
109.4 |
| H9 |
C9 |
H9A |
109.4 |
109.4 |
| H9 |
C9 |
H9B |
109.5 |
109.5 |
| H9A |
C9 |
H9B |
109.5 |
109.5 |
| H8 |
C8 |
H8A |
109.5 |
109.5 |
| H8 |
C8 |
H8B |
109.5 |
109.5 |
| H8A |
C8 |
H8B |
109.5 |
109.5 |
Torsion Angles for LE1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
O |
OXT |
180.0 |
180.3 |
| O |
C |
OXT |
HXT |
0.0 |
359.9 |
| O |
C |
CA |
OXT |
180.0 |
179.7 |
| CA |
C |
OXT |
HXT |
180.1 |
179.7 |
| CB |
CA |
C |
OXT |
92.0 |
280.2 |
| N |
CA |
CB |
HA |
243.5 |
240.0 |
| C9 |
CB |
CA |
C8 |
122.5 |
240.0 |
| CA |
CB |
C9 |
H9 |
26.7 |
60.0 |
| CA |
CB |
C9 |
H9A |
146.6 |
180.0 |
| CA |
CB |
C9 |
H9B |
266.6 |
300.0 |
| CA |
CB |
C8 |
H8 |
358.5 |
60.0 |
| CA |
CB |
C8 |
H8A |
118.5 |
180.0 |
| CA |
CB |
C8 |
H8B |
238.5 |
300.0 |
| HA |
CA |
C |
OXT |
209.1 |
40.3 |
| N |
CA |
HA |
CB |
120.4 |
120.0 |
| HA |
CA |
CB |
C9 |
306.8 |
180.0 |
| HA |
CA |
CB |
C8 |
184.4 |
300.0 |
| N |
CA |
C |
OXT |
325.7 |
160.3 |
| CB |
CA |
N |
HA |
117.0 |
120.0 |
| N |
CA |
CB |
C9 |
190.3 |
60.0 |
| N |
CA |
CB |
C8 |
67.9 |
180.0 |
| H |
N |
CA |
CB |
332.0 |
176.1 |
| H |
N |
CA |
HA |
215.0 |
56.1 |
| H2 |
N |
CA |
CB |
92.0 |
300.0 |
| H2 |
N |
CA |
HA |
335.0 |
180.0 |
| C9 |
CB |
CA |
HA |
306.8 |
180.0 |
| CA |
CB |
C9 |
C8 |
236.9 |
120.0 |
| C9 |
CB |
C8 |
H8 |
236.4 |
180.0 |
| C9 |
CB |
C8 |
H8A |
356.4 |
300.0 |
| C9 |
CB |
C8 |
H8B |
116.4 |
60.0 |
| H9 |
C9 |
CB |
H9A |
240.0 |
240.0 |
| H9 |
C9 |
CB |
H9B |
120.0 |
120.0 |
| H9A |
C9 |
CB |
H9B |
240.0 |
240.0 |
| C8 |
CB |
CA |
HA |
184.4 |
300.0 |
| CA |
CB |
C8 |
C9 |
122.0 |
240.0 |
| C8 |
CB |
C9 |
H9 |
149.8 |
300.0 |
| C8 |
CB |
C9 |
H9A |
269.8 |
60.0 |
| C8 |
CB |
C9 |
H9B |
29.8 |
180.0 |
| H8 |
C8 |
CB |
H8A |
240.0 |
240.0 |
| H8 |
C8 |
CB |
H8B |
120.0 |
120.0 |
| H8A |
C8 |
CB |
H8B |
240.0 |
240.0 |
| H9 |
C9 |
CB |
C8 |
149.8 |
300.0 |
| CB |
C9 |
H9 |
H9A |
120.0 |
120.0 |
| CB |
C9 |
H9 |
H9B |
240.0 |
240.0 |
| H9A |
C9 |
H9 |
H9B |
120.0 |
120.0 |
| H9A |
C9 |
CB |
C8 |
269.8 |
60.0 |
| CB |
C9 |
H9A |
H9 |
240.0 |
240.0 |
| CB |
C9 |
H9A |
H9B |
120.0 |
120.0 |
| H9 |
C9 |
H9A |
H9B |
240.0 |
240.0 |
| H9B |
C9 |
CB |
C8 |
29.8 |
180.0 |
| CB |
C9 |
H9B |
H9 |
120.0 |
120.0 |
| CB |
C9 |
H9B |
H9A |
240.0 |
240.0 |
| H9 |
C9 |
H9B |
H9A |
120.0 |
119.9 |
| CB |
C8 |
H8 |
H8A |
120.0 |
120.0 |
| CB |
C8 |
H8 |
H8B |
240.0 |
240.1 |
| H8A |
C8 |
H8 |
H8B |
120.0 |
120.0 |
| CB |
C8 |
H8A |
H8 |
240.0 |
240.0 |
| CB |
C8 |
H8A |
H8B |
120.0 |
120.0 |
| H8 |
C8 |
H8A |
H8B |
240.0 |
240.0 |
| CB |
C8 |
H8B |
H8 |
120.0 |
119.9 |
| CB |
C8 |
H8B |
H8A |
240.0 |
240.0 |
| H8 |
C8 |
H8B |
H8A |
120.0 |
120.0 |
| SG |
CB |
CA |
HA |
65.5 |
60.0 |
| SG |
CB |
C9 |
H9 |
268.1 |
180.0 |
| SG |
CB |
C9 |
H9A |
28.1 |
300.0 |
| SG |
CB |
C9 |
H9B |
148.1 |
60.0 |
| SG |
CB |
C8 |
H8 |
117.6 |
299.9 |
| SG |
CB |
C8 |
H8A |
237.6 |
60.0 |
| SG |
CB |
C8 |
H8B |
357.6 |
180.0 |