PDB Chemical Component LCJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for LCJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C16 |
N08 |
1.335 |
1.336 |
| C16 |
C11 |
1.370 |
1.378 |
| N08 |
C15 |
1.359 |
1.306 |
| C11 |
C13 |
1.573 |
1.414 |
| C11 |
N06 |
1.343 |
1.380 |
| C13 |
C14 |
1.462 |
1.353 |
| C15 |
N06 |
1.352 |
1.361 |
| N06 |
C10 |
1.527 |
1.370 |
| C14 |
C12 |
1.433 |
1.465 |
| C10 |
C12 |
1.491 |
1.389 |
| C10 |
N07 |
1.441 |
1.371 |
| C12 |
C18 |
1.515 |
1.468 |
| N07 |
C17 |
1.448 |
1.399 |
| C20 |
C17 |
1.519 |
1.388 |
| C20 |
C22 |
1.515 |
1.382 |
| C18 |
O04 |
1.179 |
1.217 |
| C18 |
N09 |
1.442 |
1.348 |
| C17 |
C19 |
1.515 |
1.390 |
| C22 |
C23 |
1.515 |
1.383 |
| N09 |
O03 |
1.399 |
1.416 |
| O05 |
C25 |
1.401 |
1.429 |
| C25 |
C24 |
1.528 |
1.530 |
| C19 |
F02 |
1.362 |
1.351 |
| C19 |
C21 |
1.526 |
1.383 |
| C24 |
O03 |
1.398 |
1.429 |
| C23 |
C21 |
1.519 |
1.383 |
| C23 |
I01 |
2.100 |
2.095 |
| C13 |
H1 |
1.080 |
1.080 |
| C14 |
H2 |
1.080 |
1.080 |
| C15 |
H3 |
1.080 |
1.081 |
| C16 |
H4 |
1.081 |
1.080 |
| C20 |
H5 |
1.080 |
1.080 |
| C21 |
H6 |
1.080 |
1.080 |
| C22 |
H7 |
1.080 |
1.080 |
| C24 |
H8 |
1.099 |
1.090 |
| C24 |
H9 |
1.100 |
1.090 |
| C25 |
H10 |
1.100 |
1.090 |
| C25 |
H11 |
1.100 |
1.091 |
| N07 |
H12 |
1.000 |
0.971 |
| N09 |
H13 |
1.000 |
0.970 |
| O05 |
H14 |
0.950 |
0.968 |
Bond Angles for LCJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N08 |
C16 |
H4 |
125.7 |
126.1 |
| C16 |
C11 |
N06 |
107.4 |
106.4 |
| N08 |
C15 |
H3 |
125.8 |
125.4 |
| C13 |
C11 |
N06 |
120.6 |
120.9 |
| C11 |
C13 |
C14 |
119.9 |
119.9 |
| C11 |
C13 |
H1 |
120.0 |
120.1 |
| C11 |
N06 |
C15 |
108.0 |
106.9 |
| C14 |
C13 |
H1 |
120.1 |
120.1 |
| C13 |
C14 |
H2 |
120.4 |
120.4 |
| N06 |
C15 |
H3 |
125.8 |
125.5 |
| N06 |
C10 |
N07 |
119.8 |
120.0 |
| C14 |
C12 |
C18 |
119.4 |
120.3 |
| C12 |
C10 |
N07 |
120.0 |
120.0 |
| C10 |
C12 |
C18 |
120.1 |
120.3 |
| C10 |
N07 |
C17 |
119.1 |
120.0 |
| C10 |
N07 |
H12 |
120.4 |
120.0 |
| C12 |
C18 |
O04 |
119.6 |
120.0 |
| C12 |
C18 |
N09 |
120.8 |
120.0 |
| C20 |
C22 |
C23 |
119.1 |
120.1 |
| C22 |
C20 |
H5 |
119.3 |
120.0 |
| C20 |
C22 |
H7 |
120.5 |
120.0 |
| N09 |
C18 |
O04 |
119.5 |
120.0 |
| C18 |
N09 |
O03 |
117.6 |
120.0 |
| C18 |
N09 |
H13 |
121.2 |
120.1 |
| C17 |
C19 |
F02 |
119.4 |
120.0 |
| C17 |
C19 |
C21 |
119.7 |
119.9 |
| C22 |
C23 |
I01 |
118.3 |
119.9 |
| C23 |
C22 |
H7 |
120.4 |
119.9 |
| C24 |
O03 |
N09 |
108.4 |
114.0 |
| O03 |
N09 |
H13 |
121.2 |
120.0 |
| O05 |
C25 |
H10 |
109.4 |
109.5 |
| O05 |
C25 |
H11 |
109.4 |
109.4 |
| C25 |
C24 |
O03 |
109.0 |
109.5 |
| C25 |
C24 |
H8 |
109.6 |
109.5 |
| C25 |
C24 |
H9 |
109.6 |
109.5 |
| C21 |
C19 |
F02 |
120.9 |
120.0 |
| C19 |
C21 |
H6 |
119.8 |
120.0 |
| O03 |
C24 |
H8 |
109.6 |
109.4 |
| O03 |
C24 |
H9 |
109.6 |
109.5 |
| C23 |
C21 |
H6 |
119.9 |
120.0 |
| H8 |
C24 |
H9 |
109.5 |
109.5 |
| H10 |
C25 |
H11 |
109.5 |
109.5 |
Torsion Angles for LCJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N08 |
C16 |
C11 |
N06 |
359.7 |
359.1 |
| C16 |
N08 |
C15 |
H3 |
179.1 |
179.4 |
| C13 |
C11 |
C16 |
N06 |
180.3 |
180.6 |
| C16 |
C11 |
C13 |
H1 |
359.9 |
359.3 |
| C16 |
C11 |
N06 |
C15 |
359.7 |
0.5 |
| N06 |
C15 |
N08 |
H3 |
180.0 |
180.0 |
| C16 |
C11 |
C13 |
N06 |
179.7 |
179.3 |
| C13 |
C11 |
N06 |
C15 |
179.5 |
180.0 |
| C14 |
C13 |
C11 |
H1 |
180.0 |
180.7 |
| C11 |
C13 |
C14 |
H2 |
180.0 |
179.6 |
| N06 |
C11 |
C13 |
C14 |
0.2 |
0.7 |
| N06 |
C11 |
C13 |
H1 |
180.2 |
180.0 |
| C11 |
N06 |
C15 |
H3 |
180.7 |
180.0 |
| C11 |
N06 |
C10 |
N07 |
180.2 |
180.2 |
| C14 |
C13 |
C11 |
N06 |
0.2 |
0.7 |
| C11 |
C13 |
C14 |
H1 |
180.0 |
179.3 |
| C13 |
C14 |
C12 |
C18 |
180.2 |
180.0 |
| N08 |
C15 |
N06 |
H3 |
180.0 |
180.0 |
| C15 |
N06 |
C10 |
N07 |
0.6 |
359.7 |
| C12 |
C10 |
N06 |
N07 |
179.9 |
179.7 |
| N06 |
C10 |
N07 |
C17 |
80.1 |
299.4 |
| N06 |
C10 |
N07 |
H12 |
260.2 |
119.4 |
| C11 |
C13 |
C14 |
C12 |
360.0 |
359.6 |
| C14 |
C12 |
C10 |
N07 |
179.9 |
180.0 |
| C10 |
C12 |
C14 |
C18 |
179.6 |
180.0 |
| C14 |
C12 |
C18 |
O04 |
139.0 |
185.7 |
| C14 |
C12 |
C18 |
N09 |
320.2 |
5.7 |
| N06 |
C10 |
C12 |
N07 |
180.1 |
180.3 |
| C14 |
C12 |
C10 |
C18 |
180.4 |
180.0 |
| C12 |
C10 |
N07 |
C17 |
260.3 |
119.7 |
| C12 |
C10 |
N07 |
H12 |
80.3 |
299.7 |
| C10 |
C12 |
C18 |
O04 |
319.3 |
5.7 |
| C10 |
C12 |
C18 |
N09 |
140.5 |
185.7 |
| N07 |
C10 |
C12 |
C18 |
359.6 |
360.0 |
| C18 |
C12 |
C10 |
N07 |
359.6 |
360.0 |
| N09 |
C18 |
C12 |
O04 |
181.2 |
180.0 |
| C12 |
C18 |
N09 |
O03 |
179.0 |
175.4 |
| C12 |
C18 |
N09 |
H13 |
359.0 |
355.4 |
| C10 |
N07 |
C17 |
H12 |
180.0 |
180.0 |
| C10 |
N07 |
C17 |
C20 |
294.0 |
353.5 |
| C20 |
C17 |
C19 |
F02 |
180.0 |
179.9 |
| C20 |
C17 |
C19 |
C21 |
0.1 |
360.0 |
| C20 |
C22 |
C23 |
I01 |
179.9 |
180.0 |
| C23 |
C22 |
C20 |
H7 |
180.0 |
179.9 |
| C12 |
C18 |
O04 |
N09 |
181.2 |
180.0 |
| O04 |
C18 |
N09 |
O03 |
0.2 |
355.4 |
| O04 |
C18 |
N09 |
H13 |
180.2 |
175.4 |
| C12 |
C18 |
N09 |
O04 |
178.8 |
180.0 |
| C24 |
O03 |
N09 |
C18 |
262.2 |
180.0 |
| O03 |
N09 |
C18 |
H13 |
180.0 |
180.0 |
| C10 |
N07 |
C17 |
C19 |
114.6 |
173.7 |
| C21 |
C19 |
C17 |
F02 |
180.1 |
180.0 |
| C17 |
C19 |
C21 |
H6 |
180.3 |
180.0 |
| C23 |
C22 |
C20 |
H5 |
180.2 |
180.0 |
| C20 |
C22 |
C23 |
H7 |
180.0 |
180.1 |
| C22 |
C23 |
C21 |
H6 |
179.5 |
180.0 |
| O03 |
N09 |
C18 |
O04 |
0.2 |
355.4 |
| C18 |
N09 |
O03 |
H13 |
180.0 |
180.0 |
| C25 |
C24 |
O03 |
N09 |
278.9 |
180.0 |
| N09 |
O03 |
C24 |
H8 |
159.0 |
60.0 |
| N09 |
O03 |
C24 |
H9 |
38.8 |
300.0 |
| O05 |
C25 |
C24 |
H8 |
298.2 |
184.9 |
| O05 |
C25 |
C24 |
H9 |
58.3 |
305.0 |
| H10 |
C25 |
O05 |
H11 |
240.1 |
120.0 |
| O03 |
C24 |
C25 |
H8 |
240.1 |
240.1 |
| O03 |
C24 |
C25 |
H9 |
119.9 |
120.0 |
| H8 |
C24 |
C25 |
H9 |
239.9 |
240.0 |
| C17 |
C19 |
F02 |
C21 |
180.1 |
180.0 |
| F02 |
C19 |
C21 |
H6 |
0.4 |
0.0 |
| C17 |
C19 |
C21 |
F02 |
179.9 |
180.0 |
| C23 |
C21 |
C19 |
H6 |
180.0 |
180.0 |
| C18 |
N09 |
O03 |
C24 |
262.2 |
180.0 |
| C24 |
O03 |
N09 |
H13 |
82.2 |
360.0 |
| C25 |
C24 |
O03 |
H8 |
119.9 |
120.0 |
| C25 |
C24 |
O03 |
H9 |
240.1 |
240.0 |
| H8 |
C24 |
O03 |
H9 |
120.2 |
120.0 |
| C20 |
C22 |
C23 |
C21 |
0.2 |
360.0 |
| C23 |
C21 |
C19 |
F02 |
180.4 |
180.0 |
| C19 |
C21 |
C23 |
H6 |
180.0 |
180.0 |
| I01 |
C23 |
C22 |
H7 |
359.9 |
360.0 |
| I01 |
C23 |
C21 |
H6 |
359.9 |
360.0 |
| H1 |
C13 |
C11 |
N06 |
180.2 |
180.0 |
| C11 |
C13 |
H1 |
C14 |
180.0 |
180.7 |
| H1 |
C13 |
C14 |
H2 |
0.0 |
0.2 |
| H2 |
C14 |
C13 |
H1 |
0.0 |
0.2 |
| H2 |
C14 |
C12 |
C18 |
0.2 |
360.0 |
| H4 |
C16 |
C11 |
N06 |
179.7 |
180.1 |
| H5 |
C20 |
C22 |
C23 |
180.2 |
180.0 |
| H5 |
C20 |
C22 |
H7 |
0.2 |
0.1 |
| H6 |
C21 |
C19 |
F02 |
0.4 |
0.0 |
| C20 |
C22 |
H7 |
C23 |
180.0 |
179.9 |
| H7 |
C22 |
C20 |
H5 |
0.2 |
0.1 |
| H7 |
C22 |
C23 |
I01 |
359.9 |
360.0 |
| H8 |
C24 |
O03 |
N09 |
159.0 |
60.0 |
| C25 |
C24 |
H8 |
O03 |
240.4 |
240.0 |
| C25 |
C24 |
H8 |
H9 |
120.2 |
120.0 |
| O03 |
C24 |
H8 |
H9 |
239.8 |
240.0 |
| H9 |
C24 |
O03 |
N09 |
38.8 |
300.0 |
| C25 |
C24 |
H9 |
O03 |
119.6 |
120.0 |
| C25 |
C24 |
H9 |
H8 |
239.8 |
240.0 |
| O03 |
C24 |
H9 |
H8 |
120.2 |
119.9 |
| O05 |
C25 |
H10 |
H11 |
119.9 |
240.0 |
| H10 |
C25 |
C24 |
O03 |
58.2 |
185.0 |
| H10 |
C25 |
C24 |
H8 |
178.2 |
305.0 |
| H10 |
C25 |
C24 |
H9 |
298.3 |
65.0 |
| O05 |
C25 |
H11 |
H10 |
240.1 |
120.0 |
| H11 |
C25 |
C24 |
O03 |
298.3 |
305.0 |
| H11 |
C25 |
C24 |
H8 |
58.2 |
65.0 |
| H11 |
C25 |
C24 |
H9 |
178.4 |
185.0 |
| C10 |
N07 |
H12 |
C17 |
180.0 |
180.0 |
| H13 |
N09 |
C18 |
O04 |
180.2 |
175.4 |
| C18 |
N09 |
H13 |
O03 |
180.0 |
180.0 |
| H14 |
O05 |
C25 |
H10 |
300.0 |
60.0 |
| H14 |
O05 |
C25 |
H11 |
60.0 |
300.0 |