PDB Chemical Component LCG

Ideal Model

Chemical Description

Name [(1R,3R,4R,7S)-7-HYDROXY-3-(GUANIN-9-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
Formula C11 H14 N5 O8 P
Formal charge 0
Molecular weight 375.231 g/mol
Component type RNA LINKING
Nonstandard Parent Id DG

Chemical features

Atom count 39
Chiral atom count 4
Chiral atoms C3' C2' C4' C1'
Observed leaving atoms OP3 HO3'
Bond count 42
Aromatic bond count 5

Chemical Identifiers

Systematic name (ACDLabs) 2-amino-9-{2,5-anhydro-4-[(phosphonooxy)methyl]-alpha-L-lyxofuranosyl}-1,9-dihydro-6H-purin-6-one
Systematic name (OpenEye OEToolkits) [(1R,4R,6R,7S)-6-(2-amino-6-oxo-1H-purin-9-yl)-7-hydroxy-2,5-dioxabicyclo[2.2.1]heptan-4-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@]4(CO[C@@H]3[C@@H]4O)CO[P](O)(O)=O
SMILES (CACTVS) NC1=Nc2n(cnc2C(=O)N1)[CH]3O[C]4(CO[CH]3[CH]4O)CO[P](O)(O)=O
Stereo SMILES (OpenEye) c1nc2c(n1[C@H]3[C@H]4[C@@H]([C@@](O3)(CO4)COP(=O)(O)O)O)N=C(NC2=O)N
InChI descriptor InChI=1S/C11H14N5O8P/c12-10-14-7-4(8(18)15-10)13-3-16(7)9-5-6(17)11(24-9,1-22-5)2-23-25(19,20)21/h3,5-6,9,17H,1-2H2,(H2,19,20,21)(H3,12,14,15,18)/t5-,6+,9-,11-/m1/s1
InChIKey descriptor FZGXOAHULCKQGE-HLJYALQUSA-N

Status Information

Last modified 2011-06-04
Created 2002-06-27
Release status REL
Model PDB code 1H0Q
Processing site EBI