PDB Chemical Component LC4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for LC4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C2 1.255 1.209
C2 C3 1.542 1.507
C2 O17 1.261 1.342
O17 HO17 0.950 0.968
C4 C3 1.530 1.530
C3 H3 1.100 1.090
C3 H3A 1.100 1.090
C4 C5 1.523 1.530
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C5 C6 1.528 1.530
C5 H5 1.100 1.090
C5 H5A 1.100 1.090
C6 C7 1.535 1.529
C6 H6 1.100 1.090
C6 H6A 1.100 1.090
C7 C18 1.535 1.530
C7 H7 1.100 1.091
C7 H7A 1.100 1.089
C18 C19 1.540 1.530
C18 H18 1.100 1.090
C18 H18A 1.100 1.090
C19 C8 1.539 1.530
C19 H19 1.100 1.090
C19 H19A 1.100 1.089
C8 C9 1.531 1.530
C8 H8 1.100 1.090
C8 H8A 1.100 1.090
C9 C10 1.534 1.530
C9 H9 1.100 1.090
C9 H9A 1.100 1.090
C10 C11 1.543 1.529
C10 H10 1.100 1.090
C10 H10A 1.100 1.089
C11 N12 1.483 1.465
C11 H11 1.100 1.090
C11 H11A 1.100 1.090
N12 C13 1.346 1.368
N12 C16 1.344 1.351
C13 C14 1.375 1.347
C13 H13 1.080 1.079
C14 N15 1.343 1.342
C14 H14 1.080 1.079
C16 N15 1.350 1.305
C16 H16 1.080 1.080

Bond Angles for LC4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C2 C3 120.9 120.0
O1 C2 O17 118.7 120.0
O17 C2 C3 120.3 120.0
C2 C3 H3 106.6 109.5
C2 C3 H3A 106.6 109.5
C2 O17 HO17 109.5 117.0
C4 C3 H3 106.6 109.5
C4 C3 H3A 106.6 109.4
H3 C3 H3A 112.2 109.5
C5 C4 H4 109.1 109.5
C5 C4 H4A 109.1 109.4
C4 C5 C6 114.3 109.5
C4 C5 H5 107.9 109.5
C4 C5 H5A 107.9 109.5
H4 C4 H4A 109.8 109.5
C6 C5 H5 107.9 109.5
C6 C5 H5A 107.9 109.4
C5 C6 C7 110.7 109.5
C5 C6 H6 109.1 109.5
C5 C6 H6A 109.0 109.5
H5 C5 H5A 111.0 109.5
C7 C6 H6 109.1 109.4
C7 C6 H6A 109.1 109.5
C6 C7 C18 116.2 109.5
C6 C7 H7 107.3 109.5
C6 C7 H7A 107.3 109.5
H6 C6 H6A 109.9 109.5
C18 C7 H7 107.3 109.4
C18 C7 H7A 107.3 109.5
C7 C18 C19 110.7 109.5
C7 C18 H18 109.1 109.5
C7 C18 H18A 109.1 109.5
H7 C7 H7A 111.6 109.5
C19 C18 H18 109.1 109.5
C19 C18 H18A 109.1 109.5
C18 C19 C8 115.4 109.5
C18 C19 H19 107.6 109.5
C18 C19 H19A 107.5 109.5
H18 C18 H18A 109.8 109.5
C8 C19 H19 107.5 109.4
C8 C19 H19A 107.6 109.5
C19 C8 C9 112.3 109.5
C19 C8 H8 108.5 109.5
C19 C8 H8A 108.5 109.5
H19 C19 H19A 111.3 109.4
C9 C8 H8 108.5 109.5
C9 C8 H8A 108.5 109.5
C8 C9 C10 116.7 109.5
C8 C9 H9 107.1 109.5
C8 C9 H9A 107.1 109.5
H8 C8 H8A 110.4 109.5
C10 C9 H9 107.1 109.4
C10 C9 H9A 107.1 109.5
C9 C10 C11 113.7 109.5
C9 C10 H10 108.1 109.5
C9 C10 H10A 108.1 109.5
H9 C9 H9A 111.7 109.5
C11 C10 H10 108.1 109.4
C11 C10 H10A 108.1 109.5
C10 C11 N12 118.0 109.5
C10 C11 H11 106.7 109.5
C10 C11 H11A 106.7 109.5
H10 C10 H10A 110.8 109.4
N12 C11 H11 106.7 109.4
N12 C11 H11A 106.7 109.4
C11 N12 C13 127.5 126.4
C11 N12 C16 125.2 126.4
H11 C11 H11A 112.1 109.5
C13 N12 C16 107.4 107.2
N12 C13 C14 108.8 106.8
N12 C13 H13 125.6 126.6
N12 C16 N15 108.6 108.7
N12 C16 H16 125.7 125.6
C14 C13 H13 125.6 126.6
C13 C14 N15 106.4 108.0
C13 C14 H14 126.8 126.0
N15 C14 H14 126.8 126.0

Torsion Angles for LC4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O17 C2 O1 C3 181.8 180.2
O1 C2 C3 H3 193.6 119.9
O1 C2 C3 H3A 313.6 240.0
O1 C2 O17 HO17 360.0 0.1
O1 C2 C3 O17 181.8 180.2
C3 C2 O17 HO17 181.8 180.2
C4 C3 C2 H3 240.0 240.0
C4 C3 C2 H3A 120.0 119.9
H3 C3 C2 H3A 240.1 240.0
O1 C2 O17 C3 178.2 179.8
O17 C2 C3 H3 11.8 299.7
O17 C2 C3 H3A 131.7 59.8
HO17 O17 C2 C3 181.8 180.2
C2 C3 C4 H3 120.0 120.1
C2 C3 C4 H3A 240.0 240.0
H3 C3 C4 H3A 119.9 120.0
C2 C3 H3 H3A 116.3 120.0
C4 C3 H3 H3A 243.7 240.1
C2 C3 H3A H3 243.7 239.9
C4 C3 H3A H3 116.3 120.0
C5 C4 C3 H3 346.1 59.9
C5 C4 C3 H3A 226.2 300.0
H4 C4 C5 H4A 120.0 120.0
C6 C5 C4 H5 240.0 240.0
C6 C5 C4 H5A 120.0 119.9
C4 C5 C6 C7 190.4 180.0
C4 C5 C6 H6 310.4 300.0
C4 C5 C6 H6A 70.4 60.1
H5 C5 C4 H5A 240.0 240.0
H4 C4 C3 H3 106.2 180.0
H4 C4 C3 H3A 346.2 60.0
C5 C4 H4 H4A 240.5 240.0
H4 C4 C5 C6 353.2 60.0
H4 C4 C5 H5 113.2 180.0
H4 C4 C5 H5A 233.2 300.0
H4A C4 C3 H3 226.1 300.0
H4A C4 C3 H3A 106.2 180.0
C5 C4 H4A H4 119.5 120.0
H4A C4 C5 C6 233.2 300.0
H4A C4 C5 H5 353.2 60.0
H4A C4 C5 H5A 113.2 180.1
C6 C5 C4 H4 353.2 60.0
C6 C5 C4 H4A 233.2 300.0
C4 C5 C6 H5 120.0 120.0
C4 C5 C6 H5A 240.0 240.1
H5 C5 C6 H5A 120.0 120.0
C7 C6 C5 H6 240.0 240.0
C7 C6 C5 H6A 120.0 120.0
C5 C6 C7 C18 171.3 180.0
C5 C6 C7 H7 291.4 300.0
C5 C6 C7 H7A 51.3 60.0
H6 C6 C5 H6A 240.0 240.0
H5 C5 C4 H4 113.2 180.0
H5 C5 C4 H4A 353.2 60.0
C4 C5 H5 C6 236.1 240.0
C4 C5 H5 H5A 118.0 120.0
C6 C5 H5 H5A 242.0 240.0
H5 C5 C6 C7 70.4 60.0
H5 C5 C6 H6 190.4 180.0
H5 C5 C6 H6A 310.4 300.0
H5A C5 C4 H4 233.2 300.0
H5A C5 C4 H4A 113.2 180.1
C4 C5 H5A C6 123.9 119.9
C4 C5 H5A H5 242.0 240.0
C6 C5 H5A H5 118.0 120.0
H5A C5 C6 C7 310.4 300.0
H5A C5 C6 H6 70.4 60.0
H5A C5 C6 H6A 190.4 180.0
C7 C6 C5 H5 70.4 60.0
C7 C6 C5 H5A 310.4 300.0
C5 C6 C7 H6 120.0 120.0
C5 C6 C7 H6A 240.0 240.0
H6 C6 C7 H6A 120.0 120.0
C18 C7 C6 H7 240.0 240.1
C18 C7 C6 H7A 120.0 120.0
C6 C7 C18 C19 198.9 180.0
C6 C7 C18 H18 318.9 300.0
C6 C7 C18 H18A 78.9 60.0
H7 C7 C6 H7A 240.0 240.0
H6 C6 C5 H5 190.4 180.0
H6 C6 C5 H5A 70.4 60.0
C5 C6 H6 C7 239.0 240.0
C5 C6 H6 H6A 119.5 120.0
C7 C6 H6 H6A 240.5 240.0
H6 C6 C7 C18 51.3 60.0
H6 C6 C7 H7 171.3 179.9
H6 C6 C7 H7A 291.3 300.0
H6A C6 C5 H5 310.4 300.0
H6A C6 C5 H5A 190.4 180.0
C5 C6 H6A C7 121.0 120.0
C5 C6 H6A H6 240.5 240.0
C7 C6 H6A H6 119.5 119.9
H6A C6 C7 C18 291.3 300.0
H6A C6 C7 H7 51.3 60.0
H6A C6 C7 H7A 171.3 180.0
C18 C7 C6 H6 51.3 60.0
C18 C7 C6 H6A 291.3 300.0
C6 C7 C18 H7 120.0 120.0
C6 C7 C18 H7A 240.0 239.9
H7 C7 C18 H7A 120.0 120.0
C19 C18 C7 H18 240.0 240.0
C19 C18 C7 H18A 120.0 120.0
C7 C18 C19 C8 165.9 180.0
C7 C18 C19 H19 285.9 300.0
C7 C18 C19 H19A 45.8 60.0
H18 C18 C7 H18A 240.0 240.0
H7 C7 C6 H6 171.3 179.9
H7 C7 C6 H6A 51.3 60.0
C6 C7 H7 C18 234.5 240.0
C6 C7 H7 H7A 117.2 120.0
C18 C7 H7 H7A 242.8 240.0
H7 C7 C18 C19 78.9 60.0
H7 C7 C18 H18 198.9 180.0
H7 C7 C18 H18A 318.9 300.0
H7A C7 C6 H6 291.3 300.0
H7A C7 C6 H6A 171.3 180.0
C6 C7 H7A C18 125.5 120.0
C6 C7 H7A H7 242.8 240.0
C18 C7 H7A H7 117.2 119.9
H7A C7 C18 C19 318.9 300.1
H7A C7 C18 H18 78.9 60.0
H7A C7 C18 H18A 198.9 180.0
C19 C18 C7 H7 78.9 60.0
C19 C18 C7 H7A 318.9 300.1
C7 C18 C19 H18 120.0 120.0
C7 C18 C19 H18A 240.0 240.0
H18 C18 C19 H18A 120.0 120.0
C8 C19 C18 H19 240.0 240.0
C8 C19 C18 H19A 120.0 120.0
C18 C19 C8 C9 233.6 180.0
C18 C19 C8 H8 353.6 300.0
C18 C19 C8 H8A 113.6 60.0
H19 C19 C18 H19A 240.0 240.0
H18 C18 C7 H7 198.9 180.0
H18 C18 C7 H7A 78.9 60.0
C7 C18 H18 C19 239.0 240.0
C7 C18 H18 H18A 119.5 120.0
C19 C18 H18 H18A 240.5 240.0
H18 C18 C19 C8 45.9 60.0
H18 C18 C19 H19 165.9 180.0
H18 C18 C19 H19A 285.8 300.0
H18A C18 C7 H7 318.9 300.0
H18A C18 C7 H7A 198.9 180.0
C7 C18 H18A C19 121.0 120.0
C7 C18 H18A H18 240.5 240.0
C19 C18 H18A H18 119.5 120.0
H18A C18 C19 C8 285.9 300.0
H18A C18 C19 H19 45.9 60.0
H18A C18 C19 H19A 165.9 180.0
C8 C19 C18 H18 45.9 60.0
C8 C19 C18 H18A 285.9 300.0
C18 C19 C8 H19 120.0 120.0
C18 C19 C8 H19A 240.0 239.9
H19 C19 C8 H19A 120.0 119.9
C9 C8 C19 H8 240.0 240.0
C9 C8 C19 H8A 120.0 120.0
C19 C8 C9 C10 231.2 180.0
C19 C8 C9 H9 351.2 300.0
C19 C8 C9 H9A 111.1 60.0
H8 C8 C19 H8A 240.0 240.0
H19 C19 C18 H18 165.9 180.0
H19 C19 C18 H18A 45.9 60.0
C18 C19 H19 C8 235.1 240.0
C18 C19 H19 H19A 117.5 120.1
C8 C19 H19 H19A 242.4 240.0
H19 C19 C8 C9 113.6 60.0
H19 C19 C8 H8 233.5 180.0
H19 C19 C8 H8A 353.5 300.0
H19A C19 C18 H18 285.8 300.0
H19A C19 C18 H18A 165.9 180.0
C18 C19 H19A C8 124.9 120.0
C18 C19 H19A H19 242.5 239.9
C8 C19 H19A H19 117.6 119.9
H19A C19 C8 C9 353.6 300.1
H19A C19 C8 H8 113.6 60.0
H19A C19 C8 H8A 233.6 180.1
C9 C8 C19 H19 113.6 60.0
C9 C8 C19 H19A 353.6 300.1
C19 C8 C9 H8 120.0 120.0
C19 C8 C9 H8A 240.0 240.0
H8 C8 C9 H8A 120.0 120.0
C10 C9 C8 H9 240.0 240.0
C10 C9 C8 H9A 120.0 120.0
C8 C9 C10 C11 129.7 180.0
C8 C9 C10 H10 249.7 300.0
C8 C9 C10 H10A 9.7 60.0
H9 C9 C8 H9A 240.0 240.0
H8 C8 C19 H19 233.5 180.0
H8 C8 C19 H19A 113.6 60.0
C19 C8 H8 C9 237.7 240.0
C19 C8 H8 H8A 118.8 120.0
C9 C8 H8 H8A 241.2 240.0
H8 C8 C9 C10 111.2 60.0
H8 C8 C9 H9 231.2 180.0
H8 C8 C9 H9A 351.1 300.0
H8A C8 C19 H19 353.5 300.0
H8A C8 C19 H19A 233.6 180.1
C19 C8 H8A C9 122.4 120.0
C19 C8 H8A H8 241.2 240.0
C9 C8 H8A H8 118.8 120.0
H8A C8 C9 C10 351.2 300.0
H8A C8 C9 H9 111.2 60.0
H8A C8 C9 H9A 231.2 180.0
C10 C9 C8 H8 111.2 60.0
C10 C9 C8 H8A 351.2 300.0
C8 C9 C10 H9 120.0 120.0
C8 C9 C10 H9A 240.0 240.0
H9 C9 C10 H9A 120.0 120.0
C11 C10 C9 H10 240.0 240.0
C11 C10 C9 H10A 120.0 120.0
C9 C10 C11 N12 81.8 180.0
C9 C10 C11 H11 201.7 300.0
C9 C10 C11 H11A 321.8 60.0
H10 C10 C9 H10A 240.0 240.0
H9 C9 C8 H8 231.2 180.0
H9 C9 C8 H8A 111.2 60.0
C8 C9 H9 C10 234.0 240.0
C8 C9 H9 H9A 117.0 120.1
C10 C9 H9 H9A 243.0 240.0
H9 C9 C10 C11 9.7 60.0
H9 C9 C10 H10 129.7 180.0
H9 C9 C10 H10A 249.6 300.0
H9A C9 C8 H8 351.1 300.0
H9A C9 C8 H8A 231.2 180.0
C8 C9 H9A C10 126.0 120.0
C8 C9 H9A H9 243.0 239.9
C10 C9 H9A H9 117.0 119.9
H9A C9 C10 C11 249.7 300.0
H9A C9 C10 H10 9.7 60.0
H9A C9 C10 H10A 129.7 180.0
C11 C10 C9 H9 9.7 60.0
C11 C10 C9 H9A 249.7 300.0
C9 C10 C11 H10 120.0 120.0
C9 C10 C11 H10A 240.0 239.9
H10 C10 C11 H10A 120.0 119.9
N12 C11 C10 H11 240.0 240.0
N12 C11 C10 H11A 120.0 120.0
C10 C11 N12 C13 325.0 90.0
C10 C11 N12 C16 146.3 269.7
H11 C11 C10 H11A 240.0 240.0
H10 C10 C9 H9 129.7 180.0
H10 C10 C9 H9A 9.7 60.0
C9 C10 H10 C11 236.6 240.0
C9 C10 H10 H10A 118.3 120.0
C11 C10 H10 H10A 241.7 240.0
H10 C10 C11 N12 321.8 60.0
H10 C10 C11 H11 81.8 180.0
H10 C10 C11 H11A 201.8 300.0
H10A C10 C9 H9 249.6 300.0
H10A C10 C9 H9A 129.7 180.0
C9 C10 H10A C11 123.5 120.0
C9 C10 H10A H10 241.7 240.0
C11 C10 H10A H10 118.3 119.9
H10A C10 C11 N12 201.8 300.1
H10A C10 C11 H11 321.8 60.0
H10A C10 C11 H11A 81.8 180.1
N12 C11 C10 H10 321.8 60.0
N12 C11 C10 H10A 201.8 300.1
C10 C11 N12 H11 120.0 120.0
C10 C11 N12 H11A 240.0 240.0
H11 C11 N12 H11A 120.0 120.0
C13 N12 C11 C16 178.6 180.3
C11 N12 C13 C14 180.4 180.0
C11 N12 C13 H13 0.4 0.0
C11 N12 C16 N15 179.6 179.8
C11 N12 C16 H16 359.6 359.9
H11 C11 C10 H10 81.8 180.0
H11 C11 C10 H10A 321.8 60.0
C10 C11 H11 N12 233.0 240.0
C10 C11 H11 H11A 116.5 120.0
N12 C11 H11 H11A 243.5 240.1
H11 C11 N12 C13 205.0 329.9
H11 C11 N12 C16 26.3 149.7
H11A C11 C10 H10 201.8 300.0
H11A C11 C10 H10A 81.8 180.1
C10 C11 H11A N12 127.0 120.0
C10 C11 H11A H11 243.5 240.0
N12 C11 H11A H11 116.5 119.9
H11A C11 N12 C13 85.0 210.0
H11A C11 N12 C16 266.3 29.7
C13 N12 C11 H11 205.0 329.9
C13 N12 C11 H11A 85.0 210.0
C11 N12 C13 C16 181.2 179.8
C13 N12 C16 N15 0.7 359.6
C13 N12 C16 H16 180.7 179.7
C14 C13 N12 H13 180.0 180.0
N12 C13 C14 N15 0.5 360.0
N12 C13 C14 H14 180.5 180.0
C16 N12 C11 H11 26.3 149.7
C16 N12 C11 H11A 266.3 29.7
C11 N12 C16 C13 178.9 180.2
C16 N12 C13 C14 359.2 0.2
C16 N12 C13 H13 179.2 180.2
C14 C13 N12 C16 359.2 0.2
N12 C13 C14 H13 180.0 180.0
N15 C14 C13 H14 180.0 180.0
H13 C13 N12 C16 179.2 180.2
N12 C13 H13 C14 180.0 180.0
H13 C13 C14 N15 180.5 180.0
H13 C13 C14 H14 0.5 0.0
N12 C16 N15 C14 359.6 0.4
N15 C14 C13 H13 180.5 180.0
C13 C14 N15 H14 180.0 180.0
H14 C14 C13 H13 0.5 0.0
C13 C14 H14 N15 180.0 180.0
N12 C16 N15 H16 180.0 180.1
C16 N15 C14 H14 179.9 179.7
N12 C16 H16 N15 180.0 179.9