PDB Chemical Component L8B

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for L8B

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAA CAW 1.526 1.507
CAW CAK 1.340 1.414
CAW NAQ 1.331 1.302
CAK CAZ 1.341 1.355
NAQ OAT 1.447 1.210
OAT CAZ 1.368 1.340
CAZ CAM 1.521 1.507
CAM CAU 1.549 1.507
CAU OAB 1.237 1.213
CAU N 1.363 1.347
N CD2 1.469 1.475
N CA 1.481 1.470
CD2 CG 1.537 1.550
CG OD1 1.413 1.429
CG CB 1.505 1.552
CB CA 1.526 1.543
CA C 1.513 1.507
C O 1.229 1.213
C NAR 1.333 1.347
NAR CAL 1.474 1.465
CAL CAX 1.530 1.508
CAX CAF 1.400 1.383
CAX CAE 1.387 1.384
CAF CAH 1.399 1.380
CAH CAY 1.405 1.395
CAE CAG 1.387 1.379
CAG CAY 1.409 1.396
CAY CBA 1.413 1.478
CBA CAJ 1.330 1.358
CBA OAS 1.359 1.351
CAJ NAP 1.345 1.342
NAP CAI 1.331 1.303
CAI OAS 1.364 1.340
CAA HAA1 1.100 1.090
CAA HAA2 1.100 1.090
CAA HAA3 1.101 1.090
CAK HAK 1.080 1.079
CAM HAM1 1.100 1.089
CAM HAM2 1.100 1.089
CD2 HD21 1.100 1.090
CD2 HD22 1.100 1.090
CA HA 1.100 1.090
CG HG 1.100 1.090
OD1 HD1 0.950 0.966
CB HB1C 1.100 1.090
CB HB2C 1.100 1.090
NAR HAR 1.000 0.970
CAL HAL1 1.100 1.089
CAL HAL2 1.100 1.090
CAF HAF 1.079 1.080
CAE HAE 1.080 1.081
CAH HAH 1.080 1.080
CAG HAG 1.080 1.080
CAJ HAJ 1.081 1.080
CAI HAI 1.080 1.080

Bond Angles for L8B

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAA CAW CAK 124.6 126.8
CAA CAW NAQ 124.3 126.8
CAW CAA HAA1 109.5 109.5
CAW CAA HAA2 109.5 109.5
CAW CAA HAA3 109.5 109.5
CAK CAW NAQ 111.0 106.4
CAW CAK CAZ 108.2 104.0
CAW CAK HAK 125.9 128.0
CAW NAQ OAT 105.9 111.6
CAK CAZ OAT 109.6 106.4
CAK CAZ CAM 127.7 126.7
CAZ CAK HAK 125.9 128.1
NAQ OAT CAZ 105.3 111.6
OAT CAZ CAM 122.6 126.8
CAZ CAM CAU 101.5 109.5
CAZ CAM HAM1 111.4 109.4
CAZ CAM HAM2 111.4 109.5
CAM CAU OAB 117.4 120.0
CAM CAU N 122.0 120.0
CAU CAM HAM1 111.4 109.4
CAU CAM HAM2 111.4 109.5
OAB CAU N 120.4 120.0
CAU N CD2 124.1 125.6
CAU N CA 125.9 125.7
CD2 N CA 110.0 108.7
N CD2 CG 107.0 104.8
N CD2 HD21 110.1 110.4
N CD2 HD22 110.1 110.4
N CA CB 106.0 107.3
N CA C 111.0 109.9
N CA HA 112.2 109.8
CD2 CG OD1 111.3 111.0
CD2 CG CB 105.2 101.6
CG CD2 HD21 110.1 110.4
CG CD2 HD22 110.1 110.3
CD2 CG HG 110.5 111.0
OD1 CG CB 106.1 111.0
OD1 CG HG 112.4 110.9
CG OD1 HD1 109.5 114.0
CG CB CA 106.7 103.0
CB CG HG 111.0 111.1
CG CB HB1C 110.1 110.7
CG CB HB2C 110.2 110.7
CB CA C 104.0 110.0
CB CA HA 111.5 109.8
CA CB HB1C 110.2 110.9
CA CB HB2C 110.2 110.5
CA C O 119.3 119.9
CA C NAR 114.5 120.0
C CA HA 111.7 110.0
O C NAR 126.1 120.1
C NAR CAL 125.3 120.0
C NAR HAR 117.3 120.1
NAR CAL CAX 109.8 109.4
CAL NAR HAR 117.4 120.0
NAR CAL HAL1 109.4 109.5
NAR CAL HAL2 109.4 109.5
CAL CAX CAF 122.4 119.8
CAL CAX CAE 118.3 119.9
CAX CAL HAL1 109.4 109.5
CAX CAL HAL2 109.4 109.4
CAF CAX CAE 119.3 120.3
CAX CAF CAH 120.9 120.1
CAX CAF HAF 119.6 120.0
CAX CAE CAG 120.4 120.1
CAX CAE HAE 119.8 119.9
CAF CAH CAY 119.8 119.9
CAH CAF HAF 119.5 119.9
CAF CAH HAH 120.1 120.1
CAH CAY CAG 118.5 119.7
CAH CAY CBA 123.9 120.2
CAY CAH HAH 120.1 120.0
CAE CAG CAY 121.1 119.9
CAG CAE HAE 119.8 119.9
CAE CAG HAG 119.5 120.1
CAG CAY CBA 117.6 120.1
CAY CAG HAG 119.4 120.0
CAY CBA CAJ 130.0 126.6
CAY CBA OAS 123.4 126.5
CAJ CBA OAS 106.5 106.9
CBA CAJ NAP 109.2 107.5
CBA CAJ HAJ 125.4 126.3
CBA OAS CAI 108.8 107.7
CAJ NAP CAI 108.9 108.9
NAP CAJ HAJ 125.4 126.3
NAP CAI OAS 106.5 109.1
NAP CAI HAI 126.7 125.4
OAS CAI HAI 126.8 125.5
HAA1 CAA HAA2 109.5 109.5
HAA1 CAA HAA3 109.5 109.4
HAA2 CAA HAA3 109.5 109.5
HAM1 CAM HAM2 109.5 109.5
HD21 CD2 HD22 109.4 110.4
HB1C CB HB2C 109.5 110.8
HAL1 CAL HAL2 109.5 109.5

Torsion Angles for L8B

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAK CAW CAA NAQ 180.2 180.3
CAA CAW CAK CAZ 180.2 180.0
CAA CAW CAK HAK 0.1 360.0
CAA CAW NAQ OAT 180.7 180.0
HAA1 CAA CAW HAA2 240.0 240.0
HAA1 CAA CAW HAA3 120.0 119.9
HAA2 CAA CAW HAA3 240.0 240.0
CAA CAW CAK NAQ 179.8 179.8
CAK CAW CAA HAA1 180.1 89.9
CAK CAW CAA HAA2 300.2 209.9
CAK CAW CAA HAA3 60.2 330.0
CAK CAW NAQ OAT 0.6 359.8
CAW CAK CAZ OAT 358.8 359.8
CAW CAK CAZ CAM 182.3 180.0
CAZ CAK CAW HAK 180.0 180.0
CAA CAW NAQ CAK 180.2 180.2
NAQ CAW CAA HAA1 360.0 269.7
NAQ CAW CAA HAA2 120.0 29.7
NAQ CAW CAA HAA3 240.0 149.7
NAQ CAW CAK CAZ 0.3 0.2
NAQ CAW CAK HAK 180.3 180.2
CAW NAQ OAT CAZ 358.8 0.1
CAZ CAK CAW NAQ 0.3 0.2
CAW CAK CAZ HAK 180.0 180.0
NAQ OAT CAZ CAK 1.5 0.0
OAT CAZ CAK CAM 176.5 179.8
CAK CAZ CAM CAU 71.4 90.0
CAK CAZ CAM HAM1 190.1 210.0
CAK CAZ CAM HAM2 312.7 330.0
CAK CAZ OAT NAQ 1.5 0.0
NAQ OAT CAZ CAM 178.2 179.8
CAK CAZ OAT CAM 183.3 180.2
OAT CAZ CAK HAK 178.9 179.9
OAT CAZ CAM CAU 255.3 270.2
OAT CAZ CAM HAM1 13.9 30.2
OAT CAZ CAM HAM2 136.6 150.2
CAK CAZ CAM OAT 176.1 179.8
CAM CAZ CAK HAK 2.3 0.1
CAZ CAM CAU OAB 278.2 359.9
CAZ CAM CAU N 93.4 180.0
CAU CAM CAZ HAM1 241.3 240.1
CAU CAM CAZ HAM2 118.7 120.1
HAM1 CAM CAZ HAM2 237.4 240.0
CAZ CAM CAU HAM1 118.7 119.9
CAZ CAM CAU HAM2 241.3 240.0
OAB CAU CAM N 184.8 179.9
CAM CAU N CD2 3.3 0.0
CAM CAU N CA 181.5 179.7
HAM1 CAM CAU HAM2 122.6 120.1
CAM CAU OAB N 175.3 180.1
OAB CAU CAM HAM1 159.5 240.0
OAB CAU CAM HAM2 36.9 119.9
OAB CAU N CD2 178.4 180.1
OAB CAU N CA 356.6 359.7
CAM CAU N OAB 184.9 179.9
N CAU CAM HAM1 334.7 60.1
N CAU CAM HAM2 212.1 300.0
CD2 N CAU CA 181.8 180.4
CAU N CD2 CG 184.1 204.1
CAU N CD2 HD21 303.7 322.9
CAU N CD2 HD22 64.5 85.3
CAU N CA CB 190.2 178.8
CAU N CA C 302.5 298.5
CAU N CA HA 68.3 59.6
CAU N CD2 CA 178.5 179.7
CD2 N CA CB 8.6 358.5
CD2 N CA C 121.0 118.1
CD2 N CA HA 246.7 239.3
N CD2 CG OD1 96.7 81.1
N CD2 CG CB 342.2 323.0
CG CD2 N HD21 240.4 241.2
CG CD2 N HD22 119.6 118.8
N CD2 CG HG 222.4 204.9
HD21 CD2 N HD22 239.2 237.6
CAU N CA CD2 181.6 180.3
CA N CD2 CG 5.6 24.4
CA N CD2 HD21 125.2 143.2
CA N CD2 HD22 246.0 265.6
CG CB CA N 340.2 338.2
CB CA N C 247.7 240.4
CB CA N HA 121.9 119.3
N CA CB HB1C 220.6 219.7
N CA CB HB2C 99.7 96.5
N CA C O 322.6 341.4
N CA C NAR 145.5 161.4
C CA N HA 234.3 238.9
CG CD2 N CA 5.6 24.4
N CD2 CG HD21 119.6 118.8
N CD2 CG HD22 240.4 241.2
OD1 CG CD2 CB 114.5 118.1
OD1 CG CD2 HG 234.4 236.2
CD2 CG OD1 HD1 180.0 61.4
CD2 CG CB CA 23.0 35.3
CB CG CD2 HG 119.8 118.1
CD2 CG CB HB1C 142.5 153.9
CD2 CG CB HB2C 263.4 277.1
HD21 CD2 CG HD22 120.7 122.3
CD2 CG OD1 CB 246.1 247.8
OD1 CG CD2 HD21 337.1 322.2
OD1 CG CD2 HD22 216.4 199.9
CD2 CG OD1 HG 124.6 123.9
OD1 CG CB CA 264.9 277.2
CB CG OD1 HG 238.5 236.1
OD1 CG CB HB1C 24.5 35.8
OD1 CG CB HB2C 145.3 159.1
N CA CB CG 340.2 338.2
CD2 CG CB OD1 118.1 118.1
CB CG CD2 HD21 222.6 204.1
CB CG CD2 HD22 101.9 81.8
CD2 CG CB HG 240.5 241.9
OD1 CG CB HG 122.4 123.8
CB CG OD1 HD1 293.9 173.6
CG CB CA C 223.1 218.6
CG CB CA HA 102.6 97.5
CA CB CG HB1C 240.4 241.4
CA CB CG HB2C 119.6 118.1
HB1C CB CG HB2C 239.2 236.8
N CA CB C 117.1 119.5
N CA CB HA 237.6 240.7
CA CB CG HG 142.5 153.4
CG CB CA HB1C 119.5 118.5
CG CB CA HB2C 240.4 241.7
CB CA C O 76.2 99.4
CB CA C NAR 259.1 279.4
C CA CB HA 120.5 121.1
HB1C CB CA HB2C 120.9 123.3
N CA C CB 246.4 242.0
N CA C HA 126.0 121.0
CB CA C HA 239.6 239.0
C CA CB HB1C 103.5 100.2
C CA CB HB2C 342.7 336.9
O C CA NAR 177.1 180.0
CA C NAR CAL 178.9 180.0
CA C NAR HAR 358.9 359.9
CA C O NAR 183.3 180.0
O C CA HA 196.5 220.4
O C NAR CAL 2.0 360.0
O C NAR HAR 182.0 179.9
CA C NAR O 176.9 180.0
NAR C CA HA 19.4 40.4
C NAR CAL CAX 277.0 180.0
CAL NAR C HAR 180.0 180.1
C NAR CAL HAL1 37.0 300.0
C NAR CAL HAL2 157.0 60.0
C NAR CAL HAR 180.0 179.9
NAR CAL CAX CAF 339.1 90.1
NAR CAL CAX CAE 159.4 269.7
CAX CAL NAR HAL1 240.0 240.0
CAX CAL NAR HAL2 120.0 119.9
HAL1 CAL NAR HAL2 240.1 240.0
CAX CAL NAR HAR 97.0 0.0
NAR CAL CAX HAL1 120.0 120.0
NAR CAL CAX HAL2 240.0 240.0
CAF CAX CAL CAE 179.7 180.4
CAL CAX CAF CAH 179.5 180.0
CAL CAX CAF HAF 359.5 359.9
CAL CAX CAE CAG 180.5 180.0
CAL CAX CAE HAE 0.5 0.0
HAL1 CAL CAX HAL2 119.9 120.0
CAL CAX CAF CAE 180.3 179.6
CAF CAX CAL HAL1 219.1 330.0
CAF CAX CAL HAL2 99.1 210.0
CAF CAX CAE CAG 0.8 359.7
CAF CAX CAE HAE 180.8 179.7
CAX CAF CAH CAY 0.9 359.9
CAH CAF CAX HAF 180.0 180.1
CAX CAF CAH HAH 181.0 179.9
CAL CAX CAE CAF 179.7 180.4
CAE CAX CAL HAL1 39.3 149.7
CAE CAX CAL HAL2 279.4 29.7
CAE CAX CAF CAH 359.3 0.4
CAE CAX CAF HAF 179.3 180.3
CAX CAE CAG CAY 359.0 360.0
CAG CAE CAX HAE 180.0 180.0
CAX CAE CAG HAG 179.0 180.0
CAH CAF CAX CAE 359.3 0.4
CAX CAF CAH HAF 180.0 179.9
CAF CAH CAY CAG 358.8 359.7
CAF CAH CAY CBA 180.6 180.0
CAY CAH CAF HAH 180.0 180.0
CAY CAH CAF HAF 180.9 180.0
CAF CAH CAY HAH 180.0 180.0
CAE CAG CAY CAH 1.2 0.3
CAG CAY CAH CBA 178.2 179.7
CAH CAY CAG HAG 181.2 180.3
CAH CAY CBA CAJ 51.3 180.0
CAH CAY CBA OAS 227.1 359.7
CAX CAE CAG HAE 180.0 180.0
CAH CAY CAG CAE 1.2 0.3
CAE CAG CAY CBA 179.6 180.1
CAY CAG CAE HAG 180.0 180.0
CAH CAY CAG CBA 181.6 180.3
CAG CAY CAH HAH 178.8 179.8
CAY CAG CAE HAE 179.0 180.0
CAE CAG CAY HAG 180.0 180.0
CAG CAY CBA CAJ 233.0 0.3
CAG CAY CBA OAS 48.8 180.0
CAH CAY CBA CAG 178.3 179.7
CBA CAY CAH HAH 0.6 0.0
CBA CAY CAG HAG 359.6 0.0
CAJ CBA CAY OAS 184.2 180.3
CAY CBA CAJ NAP 176.8 180.0
CAY CBA CAJ HAJ 356.7 360.0
CAY CBA OAS CAI 183.0 179.8
CAY CBA CAJ OAS 176.3 179.8
CAJ CBA OAS CAI 359.7 359.6
CBA CAJ NAP CAI 359.7 0.0
NAP CAJ CBA HAJ 180.0 180.0
CAY CBA OAS CAJ 183.4 180.2
OAS CBA CAJ NAP 0.4 0.3
OAS CBA CAJ HAJ 180.4 180.2
NAP CAI OAS CBA 0.1 0.4
CBA OAS CAI HAI 180.1 180.2
NAP CAJ CBA OAS 0.4 0.3
CBA CAJ NAP HAJ 180.0 180.0
CAJ NAP CAI OAS 0.1 359.7
CAJ NAP CAI HAI 180.1 180.0
CBA OAS CAI NAP 0.1 0.4
CAI NAP CAJ HAJ 179.7 180.0
OAS CAI NAP HAI 180.0 179.8
NAP CAI OAS HAI 180.0 180.2
HAA1 CAA CAW CAK 180.1 89.9
HAA1 CAA CAW NAQ 360.0 269.7
CAW CAA HAA1 HAA2 120.0 120.0
CAW CAA HAA1 HAA3 240.0 240.0
HAA2 CAA HAA1 HAA3 120.0 120.0
HAA2 CAA CAW CAK 300.2 209.9
HAA2 CAA CAW NAQ 120.0 29.7
CAW CAA HAA2 HAA1 240.0 240.0
CAW CAA HAA2 HAA3 120.0 120.0
HAA1 CAA HAA2 HAA3 240.0 240.0
HAA3 CAA CAW CAK 60.2 330.0
HAA3 CAA CAW NAQ 240.0 149.7
CAW CAA HAA3 HAA1 120.0 120.0
CAW CAA HAA3 HAA2 240.0 240.0
HAA1 CAA HAA3 HAA2 120.0 120.0
HAK CAK CAW NAQ 180.3 180.2
CAW CAK HAK CAZ 180.0 180.0
HAK CAK CAZ OAT 178.9 179.9
HAK CAK CAZ CAM 2.3 0.1
CAZ CAM HAM1 CAU 247.5 240.0
CAZ CAM HAM1 HAM2 123.7 120.0
HAM1 CAM CAU OAB 159.5 240.0
HAM1 CAM CAU N 334.7 60.1
CAU CAM HAM1 HAM2 236.3 239.9
CAZ CAM HAM2 CAU 112.6 120.0
CAZ CAM HAM2 HAM1 236.3 240.0
HAM2 CAM CAU OAB 36.9 119.9
HAM2 CAM CAU N 212.1 300.0
CAU CAM HAM2 HAM1 123.7 120.0
HD21 CD2 N CA 125.2 143.2
N CD2 HD21 CG 242.3 244.6
N CD2 HD21 HD22 121.1 122.3
HD21 CD2 CG OD1 337.1 322.2
HD21 CD2 CG CB 222.6 204.1
CG CD2 HD21 HD22 238.9 237.7
HD21 CD2 CG HG 102.8 86.0
HD22 CD2 N CA 246.0 265.6
N CD2 HD22 CG 117.7 115.4
N CD2 HD22 HD21 238.9 237.7
HD22 CD2 CG OD1 216.4 199.9
HD22 CD2 CG CB 101.9 81.8
CG CD2 HD22 HD21 121.1 122.3
HD22 CD2 CG HG 342.0 323.7
N CA HA CB 118.7 117.8
N CA HA C 234.7 238.9
CB CA HA C 115.9 121.2
HA CA CB HB1C 343.0 339.0
HA CA CB HB2C 222.1 215.8
HA CA C O 196.5 220.4
HA CA C NAR 19.4 40.4
CD2 CG HG OD1 235.0 236.1
CD2 CG HG CB 116.3 112.2
HG CG CD2 HD21 102.8 86.0
HG CG CD2 HD22 342.0 323.7
OD1 CG HG CB 241.3 236.1
HG CG OD1 HD1 55.4 297.6
HG CG CB CA 142.5 153.4
HG CG CB HB1C 262.1 272.0
HG CG CB HB2C 22.9 35.2
HD1 OD1 CG CB 293.9 173.6
HD1 OD1 CG HG 55.4 297.6
CG CB HB1C CA 242.6 246.3
HB1C CB CG HG 262.1 272.0
CG CB HB1C HB2C 121.3 123.2
HB1C CB CA C 103.5 100.2
HB1C CB CA HA 343.0 339.0
CA CB HB1C HB2C 238.7 236.9
CG CB HB2C CA 117.4 113.5
HB2C CB CG HG 22.9 35.2
CG CB HB2C HB1C 238.7 236.8
HB2C CB CA C 342.7 336.9
HB2C CB CA HA 222.1 215.8
CA CB HB2C HB1C 121.3 123.3
C NAR HAR CAL 180.0 180.1
HAR NAR CAL CAX 97.0 0.0
HAR NAR CAL HAL1 217.0 120.0
HAR NAR CAL HAL2 337.0 240.1
NAR CAL HAL1 CAX 239.7 240.0
HAL1 CAL NAR HAR 217.0 120.0
NAR CAL HAL1 HAL2 119.9 120.0
HAL1 CAL CAX CAF 219.1 330.0
HAL1 CAL CAX CAE 39.3 149.7
CAX CAL HAL1 HAL2 240.1 240.0
NAR CAL HAL2 CAX 120.3 119.9
HAL2 CAL NAR HAR 337.0 240.1
NAR CAL HAL2 HAL1 240.1 239.9
HAL2 CAL CAX CAF 99.1 210.0
HAL2 CAL CAX CAE 279.4 29.7
CAX CAL HAL2 HAL1 119.8 120.0
HAF CAF CAX CAE 179.3 180.3
CAX CAF HAF CAH 180.0 180.1
HAF CAF CAH CAY 180.9 180.0
HAF CAF CAH HAH 1.0 360.0
CAX CAE HAE CAG 180.0 180.0
HAE CAE CAG CAY 179.0 180.0
HAE CAE CAG HAG 359.0 360.0
CAF CAH HAH CAY 180.0 180.0
HAH CAH CAF HAF 1.0 360.0
HAH CAH CAY CAG 178.8 179.8
HAH CAH CAY CBA 0.6 0.0
CAE CAG HAG CAY 180.0 180.0
HAG CAG CAE HAE 359.0 360.0
HAG CAG CAY CBA 359.6 0.0
HAJ CAJ CBA OAS 180.4 180.2
CBA CAJ HAJ NAP 180.0 180.0
HAJ CAJ NAP CAI 179.7 180.0
NAP CAI HAI OAS 180.0 179.7