PDB Chemical Component L71
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for L71
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C |
C1 |
1.517 |
1.530 |
N |
C1 |
1.487 |
1.465 |
N |
C2 |
1.384 |
1.339 |
N |
C5 |
1.383 |
1.339 |
O |
C2 |
1.220 |
1.212 |
N1 |
C11 |
1.487 |
1.470 |
O1 |
C5 |
1.221 |
1.212 |
C2 |
C3 |
1.521 |
1.513 |
C3 |
C4 |
1.549 |
1.542 |
C4 |
C5 |
1.526 |
1.513 |
C4 |
C6 |
1.521 |
1.507 |
C6 |
C7 |
1.391 |
1.382 |
C6 |
C12 |
1.392 |
1.382 |
C7 |
C8 |
1.384 |
1.382 |
C8 |
C9 |
1.387 |
1.383 |
C9 |
C10 |
1.389 |
1.383 |
C10 |
C11 |
1.519 |
1.507 |
C10 |
C12 |
1.391 |
1.383 |
C |
H |
1.100 |
1.090 |
C |
HA |
1.100 |
1.090 |
C |
HB |
1.100 |
1.091 |
C1 |
H1 |
1.100 |
1.090 |
C1 |
H1A |
1.100 |
1.090 |
N1 |
HN1 |
1.000 |
1.008 |
N1 |
HN1A |
1.000 |
1.009 |
C3 |
H3 |
1.100 |
1.091 |
C3 |
H3A |
1.100 |
1.091 |
C4 |
H4 |
1.100 |
1.090 |
C7 |
H7 |
1.081 |
1.081 |
C8 |
H8 |
1.079 |
1.080 |
C9 |
H9 |
1.080 |
1.080 |
C11 |
H11 |
1.100 |
1.090 |
C11 |
H11A |
1.100 |
1.090 |
C12 |
H12 |
1.080 |
1.080 |
Bond Angles for L71
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C |
C1 |
N |
114.7 |
109.5 |
C1 |
C |
H |
109.5 |
109.5 |
C1 |
C |
HA |
109.4 |
109.5 |
C1 |
C |
HB |
109.5 |
109.5 |
C |
C1 |
H1 |
108.1 |
109.5 |
C |
C1 |
H1A |
108.1 |
109.5 |
C1 |
N |
C2 |
123.6 |
122.7 |
C1 |
N |
C5 |
123.4 |
122.8 |
N |
C1 |
H1 |
108.1 |
109.4 |
N |
C1 |
H1A |
108.1 |
109.5 |
C2 |
N |
C5 |
113.0 |
114.5 |
N |
C2 |
O |
124.5 |
125.4 |
N |
C2 |
C3 |
109.2 |
109.2 |
N |
C5 |
O1 |
124.7 |
125.4 |
N |
C5 |
C4 |
108.0 |
109.2 |
O |
C2 |
C3 |
126.2 |
125.4 |
N1 |
C11 |
C10 |
110.5 |
109.5 |
C11 |
N1 |
HN1 |
109.5 |
111.0 |
C11 |
N1 |
HN1A |
109.5 |
111.0 |
N1 |
C11 |
H11 |
109.2 |
109.5 |
N1 |
C11 |
H11A |
109.2 |
109.5 |
O1 |
C5 |
C4 |
127.3 |
125.4 |
C2 |
C3 |
C4 |
102.9 |
103.6 |
C2 |
C3 |
H3 |
111.1 |
110.6 |
C2 |
C3 |
H3A |
111.1 |
110.6 |
C3 |
C4 |
C5 |
104.9 |
103.6 |
C3 |
C4 |
C6 |
111.9 |
110.6 |
C4 |
C3 |
H3 |
111.1 |
110.6 |
C4 |
C3 |
H3A |
111.1 |
110.6 |
C3 |
C4 |
H4 |
108.7 |
110.6 |
C5 |
C4 |
C6 |
113.2 |
110.4 |
C5 |
C4 |
H4 |
109.0 |
110.8 |
C4 |
C6 |
C7 |
121.6 |
120.0 |
C4 |
C6 |
C12 |
119.9 |
120.0 |
C6 |
C4 |
H4 |
109.1 |
110.6 |
C7 |
C6 |
C12 |
118.5 |
120.0 |
C6 |
C7 |
C8 |
120.5 |
120.0 |
C6 |
C7 |
H7 |
119.8 |
120.0 |
C6 |
C12 |
C10 |
121.9 |
120.0 |
C6 |
C12 |
H12 |
119.1 |
120.0 |
C7 |
C8 |
C9 |
120.1 |
120.0 |
C8 |
C7 |
H7 |
119.8 |
120.0 |
C7 |
C8 |
H8 |
120.0 |
120.0 |
C8 |
C9 |
C10 |
120.8 |
120.0 |
C9 |
C8 |
H8 |
119.9 |
120.0 |
C8 |
C9 |
H9 |
119.6 |
120.0 |
C9 |
C10 |
C11 |
121.9 |
120.0 |
C9 |
C10 |
C12 |
118.3 |
120.0 |
C10 |
C9 |
H9 |
119.6 |
120.0 |
C11 |
C10 |
C12 |
119.8 |
120.0 |
C10 |
C11 |
H11 |
109.2 |
109.5 |
C10 |
C11 |
H11A |
109.2 |
109.4 |
C10 |
C12 |
H12 |
119.1 |
120.0 |
H |
C |
HA |
109.5 |
109.5 |
H |
C |
HB |
109.4 |
109.4 |
HA |
C |
HB |
109.5 |
109.5 |
H1 |
C1 |
H1A |
109.5 |
109.5 |
HN1 |
N1 |
HN1A |
109.5 |
111.0 |
H3 |
C3 |
H3A |
109.5 |
110.6 |
H11 |
C11 |
H11A |
109.5 |
109.5 |
Torsion Angles for L71
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C |
C1 |
N |
C2 |
75.0 |
90.0 |
C |
C1 |
N |
C5 |
257.5 |
269.7 |
N |
C1 |
C |
H1 |
239.2 |
240.0 |
N |
C1 |
C |
H1A |
120.8 |
120.0 |
H |
C |
C1 |
HA |
239.9 |
240.0 |
H |
C |
C1 |
HB |
120.0 |
120.0 |
HA |
C |
C1 |
HB |
240.0 |
240.0 |
H1 |
C1 |
C |
H1A |
241.5 |
240.0 |
N |
C1 |
C |
H |
180.0 |
180.0 |
N |
C1 |
C |
HA |
300.0 |
300.0 |
N |
C1 |
C |
HB |
60.0 |
60.0 |
C |
C1 |
N |
H1 |
120.8 |
120.0 |
C |
C1 |
N |
H1A |
239.2 |
240.0 |
C2 |
N |
C1 |
C5 |
177.5 |
180.2 |
C1 |
N |
C2 |
O |
350.0 |
0.0 |
C1 |
N |
C2 |
C3 |
174.1 |
180.0 |
C1 |
N |
C5 |
O1 |
355.2 |
0.0 |
C1 |
N |
C5 |
C4 |
176.6 |
179.8 |
H1 |
C1 |
N |
H1A |
118.5 |
120.0 |
C1 |
N |
C2 |
C5 |
182.3 |
179.8 |
C2 |
N |
C1 |
H1 |
314.3 |
330.0 |
C2 |
N |
C1 |
H1A |
195.8 |
210.0 |
C2 |
N |
C5 |
O1 |
177.4 |
179.8 |
C2 |
N |
C5 |
C4 |
358.8 |
359.6 |
O |
C2 |
N |
C3 |
176.0 |
180.0 |
N |
C2 |
C3 |
C4 |
13.6 |
0.0 |
N |
C2 |
C3 |
H3 |
132.5 |
118.5 |
N |
C2 |
C3 |
H3A |
254.7 |
241.4 |
C1 |
N |
C5 |
C2 |
177.7 |
180.2 |
C5 |
N |
C1 |
H1 |
136.8 |
149.7 |
C5 |
N |
C1 |
H1A |
18.3 |
29.8 |
C5 |
N |
C2 |
O |
167.7 |
180.2 |
C5 |
N |
C2 |
C3 |
351.8 |
0.3 |
O1 |
C5 |
N |
C4 |
178.6 |
180.2 |
C3 |
C4 |
C5 |
N |
9.7 |
0.4 |
N |
C5 |
C4 |
C6 |
131.9 |
118.8 |
N |
C5 |
C4 |
H4 |
253.4 |
241.7 |
O |
C2 |
N |
C5 |
167.7 |
180.2 |
N |
C2 |
O |
C3 |
184.7 |
180.0 |
O |
C2 |
C3 |
C4 |
197.7 |
180.0 |
O |
C2 |
C3 |
H3 |
316.6 |
298.5 |
O |
C2 |
C3 |
H3A |
78.8 |
61.5 |
C9 |
C10 |
C11 |
N1 |
123.6 |
90.0 |
N1 |
C11 |
C10 |
C12 |
302.2 |
270.2 |
C10 |
C11 |
N1 |
H11 |
239.8 |
240.0 |
C10 |
C11 |
N1 |
H11A |
120.1 |
120.0 |
HN1 |
N1 |
C11 |
HN1A |
240.0 |
236.0 |
H11 |
C11 |
N1 |
H11A |
240.3 |
240.0 |
N |
C5 |
O1 |
C4 |
181.7 |
179.8 |
C3 |
C4 |
C5 |
O1 |
191.2 |
180.2 |
O1 |
C5 |
C4 |
C6 |
313.3 |
298.7 |
O1 |
C5 |
C4 |
H4 |
74.9 |
61.6 |
C3 |
C2 |
N |
C5 |
351.8 |
0.3 |
N |
C2 |
C3 |
O |
175.9 |
180.0 |
C2 |
C3 |
C4 |
C5 |
346.4 |
359.8 |
C2 |
C3 |
C4 |
C6 |
223.4 |
241.5 |
C4 |
C3 |
C2 |
H3 |
241.1 |
241.5 |
C4 |
C3 |
C2 |
H3A |
118.9 |
118.6 |
C2 |
C3 |
C4 |
H4 |
102.9 |
118.6 |
H3 |
C3 |
C2 |
H3A |
237.8 |
237.1 |
N |
C5 |
C4 |
C3 |
9.7 |
0.4 |
O1 |
C5 |
C4 |
C3 |
191.2 |
180.2 |
C2 |
C3 |
C4 |
H3 |
118.9 |
118.5 |
C2 |
C3 |
C4 |
H3A |
241.1 |
241.4 |
C5 |
C4 |
C3 |
C6 |
123.0 |
118.3 |
C5 |
C4 |
C3 |
H4 |
243.5 |
241.2 |
C3 |
C4 |
C6 |
C7 |
79.3 |
60.0 |
C3 |
C4 |
C6 |
C12 |
262.0 |
239.7 |
C6 |
C4 |
C3 |
H4 |
120.5 |
122.9 |
H3 |
C3 |
C4 |
H3A |
122.1 |
122.9 |
N |
C5 |
C4 |
O1 |
178.5 |
180.2 |
C3 |
C4 |
C5 |
C6 |
237.8 |
241.5 |
C5 |
C4 |
C3 |
H3 |
227.5 |
241.3 |
C5 |
C4 |
C3 |
H3A |
105.3 |
118.3 |
C3 |
C4 |
C5 |
H4 |
116.3 |
118.6 |
C5 |
C4 |
C6 |
C7 |
321.2 |
306.0 |
C5 |
C4 |
C6 |
C12 |
143.9 |
125.7 |
C6 |
C4 |
C5 |
H4 |
238.4 |
237.1 |
C3 |
C4 |
C6 |
C5 |
118.2 |
114.1 |
C6 |
C4 |
C3 |
H3 |
104.4 |
122.9 |
C6 |
C4 |
C3 |
H3A |
342.3 |
0.0 |
C3 |
C4 |
C6 |
H4 |
239.7 |
237.1 |
C5 |
C4 |
C6 |
H4 |
121.5 |
123.0 |
C7 |
C6 |
C4 |
C12 |
177.3 |
180.3 |
C4 |
C6 |
C7 |
C8 |
183.5 |
180.0 |
C4 |
C6 |
C7 |
H7 |
3.5 |
360.0 |
C4 |
C6 |
C12 |
C10 |
176.0 |
179.8 |
C4 |
C6 |
C12 |
H12 |
356.0 |
359.9 |
C4 |
C6 |
C7 |
C12 |
182.7 |
179.7 |
C7 |
C6 |
C4 |
H4 |
199.6 |
182.9 |
C7 |
C6 |
C12 |
C10 |
358.6 |
359.5 |
C7 |
C6 |
C12 |
H12 |
178.6 |
179.7 |
C6 |
C7 |
C8 |
C9 |
0.1 |
0.0 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
H8 |
180.1 |
180.0 |
C4 |
C6 |
C12 |
C7 |
177.4 |
180.3 |
C12 |
C6 |
C4 |
H4 |
22.3 |
2.6 |
C12 |
C6 |
C7 |
C8 |
0.8 |
0.3 |
C12 |
C6 |
C7 |
H7 |
180.8 |
180.2 |
C9 |
C10 |
C12 |
C6 |
1.1 |
0.5 |
C11 |
C10 |
C12 |
C6 |
182.4 |
180.3 |
C10 |
C12 |
C6 |
H12 |
180.0 |
179.8 |
C8 |
C7 |
C6 |
C12 |
0.8 |
0.3 |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
C10 |
359.6 |
359.9 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.1 |
C7 |
C8 |
C9 |
H9 |
179.6 |
179.9 |
C9 |
C8 |
C7 |
H7 |
180.1 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
179.9 |
C8 |
C9 |
C10 |
C11 |
178.5 |
180.0 |
C8 |
C9 |
C10 |
C12 |
359.8 |
359.8 |
C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
N1 |
C11 |
C10 |
C9 |
123.6 |
90.0 |
C6 |
C12 |
C10 |
C9 |
1.1 |
0.5 |
C10 |
C9 |
C8 |
H8 |
179.6 |
180.0 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
C11 |
C10 |
C9 |
C12 |
178.6 |
180.2 |
C9 |
C10 |
C11 |
H11 |
3.4 |
330.0 |
C9 |
C10 |
C11 |
H11A |
243.8 |
210.0 |
C9 |
C10 |
C12 |
H12 |
181.1 |
180.3 |
C10 |
C11 |
N1 |
HN1 |
180.0 |
180.0 |
C10 |
C11 |
N1 |
HN1A |
300.0 |
304.0 |
N1 |
C11 |
C10 |
H11 |
120.2 |
120.0 |
N1 |
C11 |
C10 |
H11A |
239.8 |
240.0 |
C6 |
C12 |
C10 |
C11 |
182.4 |
180.3 |
C9 |
C10 |
C11 |
C12 |
181.4 |
179.8 |
C11 |
C10 |
C9 |
H9 |
358.5 |
0.0 |
C11 |
C10 |
C12 |
H12 |
2.4 |
0.1 |
H11 |
C11 |
C10 |
H11A |
119.7 |
120.0 |
C6 |
C12 |
C10 |
H12 |
180.0 |
180.2 |
C9 |
C10 |
C12 |
C11 |
178.7 |
180.2 |
C12 |
C10 |
C9 |
H9 |
179.8 |
179.8 |
C12 |
C10 |
C11 |
H11 |
182.0 |
150.2 |
C12 |
C10 |
C11 |
H11A |
62.4 |
30.2 |
H |
C |
C1 |
N |
180.0 |
180.0 |
C1 |
C |
H |
HA |
120.0 |
120.0 |
C1 |
C |
H |
HB |
240.0 |
240.0 |
H |
C |
C1 |
H1 |
300.7 |
299.9 |
H |
C |
C1 |
H1A |
59.2 |
60.0 |
HA |
C |
H |
HB |
120.0 |
120.0 |
HA |
C |
C1 |
N |
300.0 |
300.0 |
C1 |
C |
HA |
H |
240.0 |
240.0 |
C1 |
C |
HA |
HB |
120.0 |
120.0 |
HA |
C |
C1 |
H1 |
60.8 |
60.0 |
HA |
C |
C1 |
H1A |
179.3 |
180.0 |
H |
C |
HA |
HB |
240.0 |
240.0 |
HB |
C |
C1 |
N |
60.0 |
60.0 |
C1 |
C |
HB |
H |
120.0 |
120.0 |
C1 |
C |
HB |
HA |
240.0 |
240.0 |
HB |
C |
C1 |
H1 |
180.8 |
179.9 |
HB |
C |
C1 |
H1A |
299.2 |
300.0 |
H |
C |
HB |
HA |
120.0 |
120.0 |
C |
C1 |
H1 |
N |
235.2 |
240.0 |
H1 |
C1 |
C |
H |
300.7 |
299.9 |
H1 |
C1 |
C |
HA |
60.8 |
60.0 |
H1 |
C1 |
C |
HB |
180.8 |
179.9 |
C |
C1 |
H1 |
H1A |
117.6 |
120.0 |
H1 |
C1 |
N |
C2 |
314.3 |
330.0 |
H1 |
C1 |
N |
C5 |
136.8 |
149.7 |
N |
C1 |
H1 |
H1A |
242.4 |
240.0 |
C |
C1 |
H1A |
N |
124.8 |
120.0 |
H1A |
C1 |
C |
H |
59.2 |
60.0 |
H1A |
C1 |
C |
HA |
179.3 |
180.0 |
H1A |
C1 |
C |
HB |
299.2 |
300.0 |
C |
C1 |
H1A |
H1 |
242.4 |
240.0 |
H1A |
C1 |
N |
C2 |
195.8 |
210.0 |
H1A |
C1 |
N |
C5 |
18.3 |
29.8 |
N |
C1 |
H1A |
H1 |
117.6 |
119.9 |
HN1 |
N1 |
C11 |
C10 |
180.0 |
180.0 |
C11 |
N1 |
HN1 |
HN1A |
120.0 |
124.0 |
HN1 |
N1 |
C11 |
H11 |
300.2 |
300.0 |
HN1 |
N1 |
C11 |
H11A |
59.9 |
60.0 |
HN1A |
N1 |
C11 |
C10 |
300.0 |
304.0 |
C11 |
N1 |
HN1A |
HN1 |
240.0 |
236.0 |
HN1A |
N1 |
C11 |
H11 |
60.2 |
64.0 |
HN1A |
N1 |
C11 |
H11A |
179.9 |
184.0 |
C2 |
C3 |
H3 |
C4 |
246.1 |
245.8 |
C2 |
C3 |
H3 |
H3A |
123.1 |
122.9 |
H3 |
C3 |
C4 |
C5 |
227.5 |
241.3 |
H3 |
C3 |
C4 |
C6 |
104.4 |
122.9 |
C4 |
C3 |
H3 |
H3A |
237.0 |
237.1 |
H3 |
C3 |
C4 |
H4 |
343.9 |
0.0 |
C2 |
C3 |
H3A |
C4 |
113.9 |
114.2 |
C2 |
C3 |
H3A |
H3 |
236.9 |
237.1 |
H3A |
C3 |
C4 |
C5 |
105.3 |
118.3 |
H3A |
C3 |
C4 |
C6 |
342.3 |
0.0 |
C4 |
C3 |
H3A |
H3 |
123.0 |
122.9 |
H3A |
C3 |
C4 |
H4 |
221.8 |
237.1 |
C3 |
C4 |
H4 |
C5 |
246.2 |
245.7 |
C3 |
C4 |
H4 |
C6 |
122.2 |
122.9 |
H4 |
C4 |
C3 |
H3 |
343.9 |
0.0 |
H4 |
C4 |
C3 |
H3A |
221.8 |
237.1 |
C5 |
C4 |
H4 |
C6 |
236.0 |
237.2 |
H4 |
C4 |
C6 |
C7 |
199.6 |
182.9 |
H4 |
C4 |
C6 |
C12 |
22.3 |
2.6 |
H7 |
C7 |
C6 |
C12 |
180.8 |
180.2 |
C6 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
C9 |
180.1 |
180.0 |
H7 |
C7 |
C8 |
H8 |
0.1 |
360.0 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.1 |
H8 |
C8 |
C7 |
H7 |
0.1 |
360.0 |
H8 |
C8 |
C9 |
C10 |
179.6 |
180.0 |
H8 |
C8 |
C9 |
H9 |
359.6 |
360.0 |
C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
H8 |
359.6 |
360.0 |
H9 |
C9 |
C10 |
C11 |
358.5 |
0.0 |
H9 |
C9 |
C10 |
C12 |
179.8 |
179.8 |
N1 |
C11 |
H11 |
C10 |
239.0 |
240.0 |
H11 |
C11 |
N1 |
HN1 |
300.2 |
300.0 |
H11 |
C11 |
N1 |
HN1A |
60.2 |
64.0 |
N1 |
C11 |
H11 |
H11A |
119.5 |
120.0 |
H11 |
C11 |
C10 |
C12 |
182.0 |
150.2 |
C10 |
C11 |
H11 |
H11A |
240.5 |
240.0 |
N1 |
C11 |
H11A |
C10 |
121.0 |
120.0 |
H11A |
C11 |
N1 |
HN1 |
59.9 |
60.0 |
H11A |
C11 |
N1 |
HN1A |
179.9 |
184.0 |
N1 |
C11 |
H11A |
H11 |
240.5 |
240.0 |
H11A |
C11 |
C10 |
C12 |
62.4 |
30.2 |
C10 |
C11 |
H11A |
H11 |
119.5 |
120.0 |
C6 |
C12 |
H12 |
C10 |
180.0 |
179.8 |