PDB Chemical Component L6E

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for L6E

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C02 C03 1.520 1.534
C02 C01 1.521 1.526
C03 C04 1.524 1.526
C01 C06 1.510 1.506
C04 C05 1.514 1.509
C06 C05 1.488 1.353
C06 C10 1.388 1.402
C05 N07 1.339 1.363
C10 C09 1.387 1.389
N07 C08 1.341 1.342
C09 C08 1.488 1.419
C09 C11 1.502 1.471
C08 O22 1.248 1.219
O23 C11 1.222 1.217
C11 N12 1.331 1.347
O17 C18 1.427 1.452
O17 C16 1.454 1.348
N12 C13 1.453 1.465
O25 C19 1.221 1.214
C18 C19 1.513 1.507
C15 C16 1.509 1.470
C15 C14 1.525 1.330
C19 N20 1.331 1.348
C16 O24 1.220 1.215
C13 C14 1.526 1.507
C21 N20 1.451 1.464
C10 H1 1.080 1.080
N12 H2 1.000 0.970
C13 H3 1.100 1.090
C13 H4 1.100 1.090
C15 H5 1.080 1.080
C21 H7 1.100 1.090
C21 H8 1.100 1.090
C21 H9 1.100 1.090
C01 H10 1.101 1.091
C01 H11 1.101 1.090
C02 H12 1.100 1.090
C02 H13 1.100 1.090
C03 H14 1.100 1.090
C03 H15 1.100 1.090
C04 H16 1.100 1.090
C04 H17 1.100 1.091
C14 H19 1.080 1.080
C18 H21 1.100 1.090
C18 H22 1.100 1.091
N20 H23 1.000 0.970
N07 H6 0.999 0.970

Bond Angles for L6E

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C02 C03 C04 111.1 108.3
C03 C02 H12 109.4 109.7
C03 C02 H13 109.4 109.7
C02 C03 H14 109.1 109.7
C02 C03 H15 109.0 109.7
C02 C01 C06 110.2 110.8
C02 C01 H10 109.3 109.3
C02 C01 H11 109.3 109.2
C03 C04 C05 111.7 110.7
C04 C03 H14 109.1 109.7
C04 C03 H15 109.1 109.7
C03 C04 H16 108.9 109.3
C03 C04 H17 108.9 109.2
C01 C06 C05 121.2 122.9
C06 C01 H10 109.3 109.2
C06 C01 H11 109.3 109.2
C04 C05 N07 119.2 116.9
C05 C04 H16 108.9 109.2
C05 C04 H17 108.9 109.2
C06 C05 N07 119.8 120.5
C06 C10 C09 119.3 119.7
C06 C10 H1 120.3 120.1
C05 N07 C08 121.8 121.9
C05 N07 H6 119.1 119.0
C10 C09 C08 118.9 118.5
C10 C09 C11 119.4 120.8
C09 C10 H1 120.3 120.2
N07 C08 O22 119.5 120.2
C09 C08 O22 120.0 120.2
C11 N12 H2 119.5 120.0
O17 C18 H21 109.4 109.5
O17 C18 H22 109.4 109.4
O17 C16 O24 119.7 120.0
N12 C13 C14 112.3 109.5
C13 N12 H2 119.5 120.0
N12 C13 H3 108.8 109.5
N12 C13 H4 108.7 109.5
C18 C19 N20 116.8 120.0
C19 C18 H21 109.4 109.5
C19 C18 H22 109.4 109.5
C14 C15 C16 112.4 120.0
C15 C16 O24 121.6 120.0
C16 C15 H5 123.8 120.0
C13 C14 C15 109.6 120.0
C14 C15 H5 123.8 120.0
C15 C14 H19 125.2 120.0
C21 N20 C19 121.8 120.0
C19 N20 H23 119.1 120.0
C14 C13 H3 108.8 109.5
C14 C13 H4 108.8 109.4
C13 C14 H19 125.2 120.0
N20 C21 H7 109.5 109.5
N20 C21 H8 109.5 109.5
N20 C21 H9 109.5 109.5
C21 N20 H23 119.1 120.0
H3 C13 H4 109.5 109.5
H7 C21 H8 109.5 109.4
H7 C21 H9 109.5 109.4
H8 C21 H9 109.4 109.5
H10 C01 H11 109.5 109.2
H12 C02 H13 109.5 109.7
H14 C03 H15 109.5 109.7
H16 C04 H17 109.5 109.2
H21 C18 H22 109.5 109.5

Torsion Angles for L6E

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C03 C02 C01 C06 53.8 50.6
C03 C02 C01 H10 173.9 171.0
C03 C02 C01 H11 293.7 290.3
C02 C03 C04 C05 45.9 51.1
C04 C03 C02 H14 239.7 240.3
C04 C03 C02 H15 120.2 119.7
C02 C03 C04 H16 166.2 171.3
C02 C03 C04 H17 285.5 290.7
H12 C02 C03 H13 240.1 120.6
H14 C03 C02 H15 240.5 239.4
C02 C01 C06 C05 339.1 342.4
C06 C01 C02 H10 239.9 239.7
C06 C01 C02 H11 120.1 120.3
H10 C01 C02 H11 240.3 240.6
C04 C03 C02 H12 50.9 171.0
C04 C03 C02 H13 170.7 50.4
C02 C03 C04 H14 120.2 119.7
C02 C03 C04 H15 239.8 240.3
C03 C04 C05 N07 167.8 162.2
C05 C04 C03 H16 239.7 239.7
C05 C04 C03 H17 120.3 120.3
H14 C03 C04 H15 119.5 120.6
H16 C04 C03 H17 240.7 240.6
C02 C01 C06 H10 120.1 120.4
C02 C01 C06 H11 239.9 239.7
C01 C06 C05 N07 179.9 180.5
C01 C06 C10 C09 179.9 179.8
C01 C06 C10 H1 359.9 359.5
H10 C01 C06 H11 119.8 119.3
C05 C04 C03 H14 285.6 291.4
C05 C04 C03 H15 166.1 170.8
C03 C04 C05 H16 120.3 120.3
C03 C04 C05 H17 239.7 239.7
C01 C06 C05 C04 0.5 0.7
C06 C05 C04 N07 179.5 179.8
C04 C05 N07 C08 179.9 179.7
C04 C05 N07 H6 359.9 359.4
H16 C04 C05 H17 119.4 119.4
C05 C06 C01 H10 219.0 222.0
C05 C06 C01 H11 99.2 102.7
C04 C05 C06 N07 180.5 180.2
C06 C05 C04 H16 227.0 221.7
C06 C05 C04 H17 107.6 102.4
C05 C06 C10 C09 0.4 359.8
C05 C06 C10 H1 180.4 179.6
C06 C05 N07 C08 0.4 359.8
C06 C05 N07 H6 180.4 179.6
C06 C10 C09 C08 359.9 359.6
C06 C10 C09 C11 179.6 179.6
C09 C10 C06 H1 180.0 180.3
N07 C05 C04 H16 47.5 41.9
N07 C05 C04 H17 288.2 282.5
C05 N07 C08 O22 179.6 180.0
C06 C10 C09 H1 180.0 179.7
C10 C09 C08 O22 180.2 180.3
C05 N07 C08 H6 180.0 179.8
C09 C08 N07 O22 180.3 179.6
C05 N07 C08 C09 359.9 359.6
C10 C09 C08 C11 179.7 180.0
C08 C09 C10 H1 179.9 179.9
N07 C08 C09 O22 179.7 180.4
C10 C09 C11 C08 180.3 180.0
C11 C09 C10 H1 359.6 359.9
C11 C09 C08 O22 0.5 0.3
C09 C11 N12 H2 354.5 354.9
O23 C11 N12 H2 173.9 174.9
C10 C09 C11 N12 171.8 185.8
C11 N12 C13 C14 107.8 180.0
C13 N12 C11 H2 180.0 180.0
C11 N12 C13 H3 228.2 300.0
C11 N12 C13 H4 347.4 60.0
C18 O17 C16 O24 39.4 0.1
C19 C18 O17 H21 239.9 120.1
C19 C18 O17 H22 120.0 240.1
H21 C18 O17 H22 240.1 120.0
C15 C16 O17 O24 178.5 180.0
O17 C16 C15 H5 333.0 360.0
C11 N12 C13 H2 180.0 180.0
N12 C13 C14 C15 313.0 125.0
C14 C13 N12 H3 239.6 240.0
C14 C13 N12 H4 120.4 120.0
N12 C13 C14 H19 133.0 305.0
H3 C13 N12 H4 240.9 240.0
O25 C19 C18 H21 266.3 120.0
O25 C19 C18 H22 146.4 240.0
O25 C19 N20 H23 319.1 180.0
O17 C18 C19 H21 120.1 239.9
O17 C18 C19 H22 239.9 119.9
C21 N20 C19 C18 319.1 180.0
C18 C19 N20 H23 139.1 360.0
H21 C18 C19 H22 119.9 240.0
O17 C16 C15 O24 181.6 180.0
C13 C14 C15 C16 195.0 180.0
C14 C15 C16 H5 180.0 180.1
C16 C15 C14 H19 15.0 359.9
C14 C15 C16 O24 331.4 0.1
C16 C15 C14 H5 180.0 179.9
C15 C14 C13 H3 192.6 5.0
C15 C14 C13 H4 73.4 245.0
C13 C14 C15 H19 180.0 180.1
N20 C19 C18 H21 86.3 300.0
N20 C19 C18 H22 326.4 60.1
C19 N20 C21 H7 180.0 300.0
C19 N20 C21 H8 300.0 60.0
C19 N20 C21 H9 60.0 180.0
C21 N20 C19 H23 180.0 180.0
O24 C16 C15 H5 151.4 180.0
C14 C13 N12 H2 287.8 360.0
N12 C13 C14 H3 120.4 120.0
N12 C13 C14 H4 239.6 240.0
C13 C14 C15 H5 15.0 0.1
C15 C14 C13 H19 180.0 179.9
H3 C13 C14 H4 119.2 120.0
C18 C19 N20 C21 319.1 180.0
C19 N20 C21 H23 180.0 180.0
H7 C21 N20 H8 240.0 240.0
H7 C21 N20 H9 120.0 120.0
H8 C21 N20 H9 240.0 240.0
C06 C10 H1 C09 180.0 180.3
H1 C10 C09 C08 179.9 179.9
H1 C10 C09 C11 359.6 359.9
H2 N12 C13 C14 287.8 360.0
H2 N12 C13 H3 48.2 120.0
H2 N12 C13 H4 167.4 240.0
N12 C13 H3 C14 237.4 240.0
H3 C13 N12 H2 48.2 120.0
N12 C13 H3 H4 118.7 120.0
H3 C13 C14 C15 192.6 5.0
C14 C13 H3 H4 241.3 240.1
H3 C13 C14 H19 12.6 185.0
N12 C13 H4 C14 122.6 120.0
H4 C13 N12 H2 167.4 240.0
N12 C13 H4 H3 241.3 240.0
H4 C13 C14 C15 73.4 245.0
C14 C13 H4 H3 118.7 120.0
H4 C13 C14 H19 253.4 65.0
C14 C15 H5 C16 180.0 179.9
H5 C15 C16 O24 151.4 180.0
H5 C15 C14 H19 194.9 180.0
H7 C21 N20 C19 180.0 300.0
N20 C21 H7 H8 120.0 120.0
N20 C21 H7 H9 240.0 240.0
H7 C21 N20 H23 360.0 120.0
H8 C21 H7 H9 120.0 119.9
H8 C21 N20 C19 300.0 60.0
N20 C21 H8 H7 240.0 240.0
N20 C21 H8 H9 120.0 120.1
H8 C21 N20 H23 120.0 240.0
H7 C21 H8 H9 240.0 240.1
H9 C21 N20 C19 60.0 180.0
N20 C21 H9 H7 120.0 120.0
N20 C21 H9 H8 240.0 240.0
H9 C21 N20 H23 240.0 0.0
H7 C21 H9 H8 120.0 119.9
C02 C01 H10 C06 239.3 238.7
C02 C01 H10 H11 119.6 119.4
H10 C01 C06 C05 219.0 222.0
C06 C01 H10 H11 240.3 240.7
C02 C01 H11 C06 120.7 121.3
C02 C01 H11 H10 240.4 240.6
H11 C01 C06 C05 99.2 102.7
C06 C01 H11 H10 119.7 119.3
H12 C02 C03 C04 50.9 171.0
C03 C02 H12 H13 119.8 239.4
H12 C02 C03 H14 171.1 290.8
H12 C02 C03 H15 290.6 51.4
H12 C02 C01 C06 293.7 170.4
H12 C02 C01 H10 53.9 290.7
H12 C02 C01 H11 173.6 50.1
H13 C02 C03 C04 170.7 50.4
C03 C02 H13 H12 240.2 120.6
H13 C02 C03 H14 291.0 170.1
H13 C02 C03 H15 50.5 290.7
H13 C02 C01 C06 173.8 291.0
H13 C02 C01 H10 294.0 51.3
H13 C02 C01 H11 53.7 170.7
C02 C03 H14 C04 238.5 241.2
H14 C03 C02 H12 171.1 290.8
H14 C03 C02 H13 291.0 170.1
C02 C03 H14 H15 119.2 120.6
H14 C03 C04 C05 285.6 291.4
C04 C03 H14 H15 240.7 239.4
H14 C03 C04 H16 45.9 51.6
H14 C03 C04 H17 165.3 171.0
C02 C03 H15 C04 121.5 118.8
H15 C03 C02 H12 290.6 51.4
H15 C03 C02 H13 50.5 290.7
C02 C03 H15 H14 240.8 239.4
H15 C03 C04 C05 166.1 170.8
C04 C03 H15 H14 119.3 120.6
H15 C03 C04 H16 286.4 291.0
H15 C03 C04 H17 45.7 50.4
C03 C04 H16 C05 237.9 238.8
H16 C04 C03 H14 45.9 51.6
H16 C04 C03 H15 286.4 291.0
C03 C04 H16 H17 119.0 119.4
H16 C04 C05 N07 47.5 41.9
C05 C04 H16 H17 241.0 240.6
C03 C04 H17 C05 122.1 121.2
H17 C04 C03 H14 165.3 171.0
H17 C04 C03 H15 45.7 50.4
C03 C04 H17 H16 241.0 240.6
H17 C04 C05 N07 288.2 282.5
C05 C04 H17 H16 119.0 119.3
H19 C14 C15 C16 15.0 359.9
C13 C14 H19 C15 180.0 179.9
H19 C14 C15 H5 194.9 180.0
H19 C14 C13 H3 12.6 185.0
H19 C14 C13 H4 253.4 65.0
O17 C18 H21 H22 119.8 240.1
H21 C18 C19 N20 86.3 300.0
C19 C18 H21 H22 240.2 120.0
O17 C18 H22 H21 240.2 120.0
H22 C18 C19 N20 326.4 60.1
C19 C18 H22 H21 119.8 240.0
C21 N20 H23 C19 180.0 180.0
H23 N20 C21 H7 360.0 120.0
H23 N20 C21 H8 120.0 240.0
H23 N20 C21 H9 240.0 0.0
C05 N07 H6 C08 180.0 180.2
H6 N07 C08 O22 359.6 0.3