PDB Chemical Component L66
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for L66
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C35 |
C36 |
1.383 |
1.382 |
| C35 |
C34 |
1.392 |
1.383 |
| C36 |
C37 |
1.390 |
1.386 |
| C34 |
C33 |
1.394 |
1.382 |
| C37 |
O38 |
1.375 |
1.360 |
| C37 |
C32 |
1.491 |
1.393 |
| C33 |
C32 |
1.392 |
1.387 |
| C39 |
O38 |
1.427 |
1.429 |
| C32 |
N3 |
1.332 |
1.402 |
| O41 |
C14 |
1.361 |
1.359 |
| C14 |
C15 |
1.389 |
1.385 |
| C14 |
C13 |
1.386 |
1.389 |
| N3 |
C1 |
1.373 |
1.372 |
| N3 |
C5 |
1.329 |
1.389 |
| C15 |
C10 |
1.395 |
1.395 |
| N1 |
C1 |
1.390 |
1.325 |
| N1 |
C2 |
1.370 |
1.331 |
| C18 |
N5 |
1.468 |
1.465 |
| C13 |
C12 |
1.392 |
1.383 |
| C1 |
N2 |
1.353 |
1.360 |
| C10 |
C5 |
1.489 |
1.480 |
| C10 |
C11 |
1.404 |
1.395 |
| C5 |
C4 |
1.535 |
1.344 |
| C12 |
C11 |
1.392 |
1.380 |
| C2 |
N5 |
1.328 |
1.387 |
| C2 |
C3 |
1.397 |
1.395 |
| C11 |
C40 |
1.514 |
1.507 |
| N5 |
C17 |
1.341 |
1.346 |
| N2 |
C4 |
1.461 |
1.380 |
| N2 |
C3 |
1.380 |
1.387 |
| C3 |
C16 |
1.392 |
1.405 |
| C17 |
O2 |
1.363 |
1.216 |
| C17 |
N4 |
1.359 |
1.343 |
| C16 |
N4 |
1.354 |
1.348 |
| C16 |
O3 |
1.360 |
1.219 |
| N4 |
H1 |
1.001 |
0.971 |
| C18 |
H2 |
1.100 |
1.090 |
| C18 |
H3 |
1.099 |
1.089 |
| C18 |
H4 |
1.100 |
1.091 |
| C4 |
H5 |
1.080 |
1.080 |
| C40 |
H6 |
1.100 |
1.090 |
| C40 |
H7 |
1.100 |
1.090 |
| C40 |
H8 |
1.100 |
1.090 |
| C12 |
H9 |
1.080 |
1.079 |
| C13 |
H10 |
1.080 |
1.080 |
| C15 |
H11 |
1.080 |
1.080 |
| O41 |
H12 |
0.950 |
0.967 |
| C33 |
H13 |
1.080 |
1.079 |
| C34 |
H14 |
1.080 |
1.080 |
| C35 |
H15 |
1.080 |
1.079 |
| C36 |
H16 |
1.080 |
1.080 |
| C39 |
H17 |
1.100 |
1.089 |
| C39 |
H18 |
1.100 |
1.090 |
| C39 |
H19 |
1.100 |
1.090 |
Bond Angles for L66
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C35 |
C36 |
C37 |
119.7 |
120.0 |
| C36 |
C35 |
H15 |
120.2 |
119.9 |
| C35 |
C36 |
H16 |
120.2 |
120.0 |
| C35 |
C34 |
H14 |
119.1 |
119.9 |
| C36 |
C37 |
O38 |
119.2 |
120.1 |
| C37 |
C36 |
H16 |
120.2 |
119.9 |
| C34 |
C33 |
H13 |
119.0 |
120.0 |
| C14 |
C15 |
H11 |
120.2 |
120.1 |
| C14 |
C13 |
H10 |
119.5 |
119.9 |
| N1 |
C1 |
N2 |
114.9 |
109.2 |
| C13 |
C12 |
H9 |
120.1 |
119.9 |
| C1 |
N2 |
C4 |
113.4 |
108.4 |
| C10 |
C11 |
C40 |
122.3 |
120.0 |
| C5 |
C4 |
H5 |
132.6 |
125.9 |
| C11 |
C40 |
H6 |
109.5 |
109.4 |
| C11 |
C40 |
H7 |
109.5 |
109.4 |
| C11 |
C40 |
H8 |
109.4 |
109.4 |
| N2 |
C4 |
H5 |
132.6 |
125.8 |
| C17 |
N4 |
H1 |
119.1 |
119.5 |
| C16 |
N4 |
H1 |
119.1 |
119.4 |
| H2 |
C18 |
H3 |
109.4 |
109.5 |
| H2 |
C18 |
H4 |
109.5 |
109.5 |
| H3 |
C18 |
H4 |
109.5 |
109.5 |
| H6 |
C40 |
H7 |
109.5 |
109.5 |
| H6 |
C40 |
H8 |
109.5 |
109.5 |
| H7 |
C40 |
H8 |
109.5 |
109.5 |
| H17 |
C39 |
H18 |
109.4 |
109.5 |
| H17 |
C39 |
H19 |
109.4 |
109.5 |
| H18 |
C39 |
H19 |
109.5 |
109.5 |
Torsion Angles for L66
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C36 |
C35 |
C34 |
H14 |
179.5 |
180.0 |
| C35 |
C36 |
C37 |
O38 |
180.5 |
180.0 |
| C37 |
C36 |
C35 |
H16 |
180.0 |
179.8 |
| C35 |
C34 |
C33 |
H13 |
180.5 |
180.0 |
| C37 |
C36 |
C35 |
H15 |
180.6 |
180.1 |
| C35 |
C36 |
C37 |
H16 |
180.0 |
180.2 |
| O38 |
C37 |
C36 |
H16 |
0.5 |
359.8 |
| O41 |
C14 |
C15 |
H11 |
0.9 |
359.7 |
| O41 |
C14 |
C13 |
H10 |
359.9 |
0.3 |
| C15 |
C14 |
C13 |
H10 |
181.0 |
179.7 |
| C14 |
C13 |
C12 |
H9 |
179.1 |
180.0 |
| N3 |
C5 |
C4 |
H5 |
178.9 |
180.0 |
| N1 |
C1 |
N2 |
C4 |
179.9 |
180.1 |
| C1 |
N2 |
C4 |
H5 |
178.6 |
180.0 |
| C10 |
C5 |
C4 |
H5 |
1.6 |
359.9 |
| C10 |
C11 |
C40 |
H6 |
90.1 |
84.7 |
| C10 |
C11 |
C40 |
H7 |
210.1 |
204.7 |
| C10 |
C11 |
C40 |
H8 |
330.1 |
324.6 |
| N2 |
C4 |
C5 |
H5 |
180.0 |
180.1 |
| C12 |
C11 |
C40 |
H6 |
270.0 |
264.7 |
| C12 |
C11 |
C40 |
H7 |
30.0 |
24.7 |
| C12 |
C11 |
C40 |
H8 |
149.9 |
144.7 |
| H6 |
C40 |
C11 |
H7 |
240.0 |
240.0 |
| H6 |
C40 |
C11 |
H8 |
120.0 |
120.0 |
| H7 |
C40 |
C11 |
H8 |
240.0 |
240.0 |
| N5 |
C17 |
N4 |
H1 |
180.4 |
180.4 |
| C5 |
C4 |
N2 |
H5 |
180.0 |
179.9 |
| C3 |
C16 |
N4 |
H1 |
179.5 |
180.0 |
| C16 |
N4 |
C17 |
H1 |
180.0 |
180.0 |
| C17 |
N4 |
C16 |
H1 |
180.0 |
180.0 |
| O3 |
C16 |
N4 |
H1 |
360.0 |
360.0 |
| H3 |
C18 |
H2 |
H4 |
120.0 |
120.0 |
| H2 |
C18 |
H3 |
H4 |
240.0 |
240.0 |
| H2 |
C18 |
H4 |
H3 |
120.0 |
120.0 |
| C11 |
C40 |
H6 |
H7 |
120.0 |
120.0 |
| C11 |
C40 |
H6 |
H8 |
240.0 |
240.0 |
| H7 |
C40 |
H6 |
H8 |
120.0 |
120.1 |
| C11 |
C40 |
H7 |
H6 |
240.0 |
240.0 |
| C11 |
C40 |
H7 |
H8 |
120.0 |
119.9 |
| H6 |
C40 |
H7 |
H8 |
240.0 |
239.9 |
| C11 |
C40 |
H8 |
H6 |
120.0 |
120.0 |
| C11 |
C40 |
H8 |
H7 |
240.0 |
240.1 |
| H6 |
C40 |
H8 |
H7 |
120.0 |
120.1 |
| H10 |
C13 |
C12 |
H9 |
359.1 |
0.0 |
| H14 |
C34 |
C33 |
H13 |
0.5 |
0.1 |
| H15 |
C35 |
C36 |
C37 |
180.6 |
180.1 |
| H15 |
C35 |
C36 |
H16 |
0.6 |
0.3 |
| H15 |
C35 |
C34 |
H14 |
359.5 |
359.6 |
| C35 |
C36 |
H16 |
C37 |
180.0 |
179.8 |
| H16 |
C36 |
C35 |
H15 |
0.6 |
0.3 |
| H16 |
C36 |
C37 |
O38 |
0.5 |
359.8 |
| H18 |
C39 |
H17 |
H19 |
120.0 |
120.0 |
| H17 |
C39 |
H18 |
H19 |
240.0 |
240.0 |
| H17 |
C39 |
H19 |
H18 |
120.0 |
120.1 |