PDB Chemical Component L5G

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for L5G

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C7	1.347	1.315
N1	N2	1.235	1.397
N3	C10	1.336	1.324
N3	N4	1.241	1.287
C4	C5	1.398	1.393
C4	C7	1.394	1.484
C4	C3	1.399	1.393
C5	C6	1.394	1.380
C6	C1	1.397	1.384
C7	C8	1.396	1.411
C8	C9	1.386	1.359
C10	N2	1.395	1.374
C10	C9	1.392	1.408
C13	C16	1.395	1.412
C13	C14	1.396	1.385
C13	O1	1.372	1.356
C15	N5	1.327	1.313
C15	C14	1.397	1.389
C17	C18	1.400	1.404
C17	C16	1.404	1.416
C17	N5	1.344	1.338
C20	C21	1.393	1.360
C20	C19	1.397	1.398
C21	C16	1.391	1.403
C22	O2	1.435	1.428
O2	C19	1.371	1.359
C19	C18	1.400	1.376
O1	C12	1.472	1.429
C12	C11	1.397	1.507
C11	N2	1.387	1.351
C11	N4	1.336	1.309
C3	C2	1.393	1.380
C2	C1	1.395	1.384
C5	H5	1.080	1.080
C6	H6	1.081	1.080
C8	H8	1.079	1.080
C15	H15	1.080	1.080
C20	H20	1.080	1.080
C21	H21	1.080	1.079
C22	H22	1.100	1.090
C22	H22A	1.100	1.090
C22	H22B	1.100	1.090
C18	H18	1.080	1.081
C14	H14	1.080	1.080
C12	H12	1.100	1.090
C12	H12A	1.101	1.090
C9	H9	1.080	1.080
C3	H3	1.080	1.080
C2	H2	1.080	1.080
C1	H1	1.080	1.080

Bond Angles for L5G

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C7	N1	N2	121.9	120.4
N1	C7	C4	118.8	119.6
N1	C7	C8	120.0	120.8
N1	N2	C10	122.6	120.1
N1	N2	C11	134.3	133.9
C10	N3	N4	111.4	109.2
N3	C10	N2	107.3	106.9
N3	C10	C9	133.5	133.7
N3	N4	C11	109.7	110.3
C5	C4	C7	121.1	120.1
C5	C4	C3	119.7	119.8
C4	C5	C6	119.9	119.9
C4	C5	H5	120.1	120.0
C7	C4	C3	119.1	120.1
C4	C7	C8	121.2	119.6
C4	C3	C2	120.4	119.9
C4	C3	H3	119.8	120.1
C5	C6	C1	120.2	120.2
C6	C5	H5	120.1	120.1
C5	C6	H6	119.9	119.9
C6	C1	C2	120.2	120.2
C1	C6	H6	119.9	119.9
C6	C1	H1	119.9	119.9
C7	C8	C9	119.1	120.1
C7	C8	H8	120.4	120.0
C8	C9	C10	117.1	119.2
C9	C8	H8	120.5	120.0
C8	C9	H9	121.5	120.4
N2	C10	C9	119.2	119.4
C10	N2	C11	103.1	106.0
C10	C9	H9	121.5	120.4
C16	C13	C14	118.2	118.0
C16	C13	O1	119.7	121.0
C13	C16	C17	119.7	118.9
C13	C16	C21	120.4	121.2
C14	C13	O1	122.1	121.0
C13	C14	C15	119.7	119.7
C13	C14	H14	120.1	120.1
C13	O1	C12	116.8	117.0
N5	C15	C14	120.7	121.8
C15	N5	C17	121.8	121.6
N5	C15	H15	119.7	119.1
C14	C15	H15	119.7	119.1
C15	C14	H14	120.2	120.1
C18	C17	C16	120.2	119.1
C18	C17	N5	119.8	120.9
C17	C18	C19	119.8	119.7
C17	C18	H18	120.1	120.2
C16	C17	N5	120.0	120.0
C17	C16	C21	119.9	119.9
C21	C20	C19	120.9	120.8
C20	C21	C16	119.8	119.8
C21	C20	H20	119.6	119.6
C20	C21	H21	120.1	120.1
C20	C19	O2	117.2	119.6
C20	C19	C18	119.5	120.8
C19	C20	H20	119.6	119.6
C16	C21	H21	120.1	120.1
C22	O2	C19	118.0	117.0
O2	C22	H22	109.5	109.5
O2	C22	H22A	109.5	109.5
O2	C22	H22B	109.4	109.5
O2	C19	C18	123.3	119.6
C19	C18	H18	120.1	120.2
O1	C12	C11	121.0	109.5
O1	C12	H12	105.8	109.4
O1	C12	H12A	103.1	109.5
C12	C11	N2	125.8	126.1
C12	C11	N4	125.7	126.2
C11	C12	H12	105.8	109.5
C11	C12	H12A	103.1	109.5
N2	C11	N4	108.5	107.7
C3	C2	C1	119.6	120.1
C2	C3	H3	119.8	120.0
C3	C2	H2	120.2	120.0
C1	C2	H2	120.2	119.9
C2	C1	H1	120.0	119.9
H22	C22	H22A	109.5	109.5
H22	C22	H22B	109.5	109.4
H22A	C22	H22B	109.5	109.5
H12	C12	H12A	119.0	109.4

Torsion Angles for L5G

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C7	N1	N2	C10	359.5	360.0
C7	N1	N2	C11	180.0	180.0
C5	C4	C7	N1	184.2	0.1
N1	C7	C4	C3	2.9	180.3
C4	C7	N1	C8	179.2	179.9
N1	C7	C8	C9	359.8	360.0
N1	C7	C8	H8	179.8	179.9
N2	N1	C7	C4	179.7	180.0
N2	N1	C7	C8	0.5	0.1
N3	C10	N2	N1	180.1	180.0
N1	N2	C10	C9	0.2	360.0
C10	N2	N1	C11	179.5	180.0
C12	C11	N2	N1	359.6	360.0
N1	N2	C11	N4	179.7	180.0
N1	N2	C10	N3	180.1	180.0
C10	N3	N4	C11	359.8	0.1
C8	C9	C10	N3	180.3	180.0
N2	C10	N3	C9	180.1	180.0
N3	C10	N2	C11	359.7	0.0
N3	C10	C9	H9	0.3	0.0
N4	N3	C10	N2	0.3	360.0
N4	N3	C10	C9	180.2	180.0
C12	C11	N4	N3	180.2	180.0
N2	C11	N4	N3	0.0	359.9
N1	C7	C4	C5	184.2	0.1
C7	C4	C5	C3	178.7	180.2
C5	C4	C7	C8	3.4	180.0
C5	C4	C3	C2	359.3	0.0
C5	C4	C3	H3	179.3	180.0
C4	C5	C6	C1	0.0	0.1
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	180.0	180.0
C4	C7	N1	N2	179.7	180.0
N1	C7	C4	C8	180.8	180.1
C5	C4	C7	C3	181.3	179.8
C7	C4	C5	C6	179.1	180.0
C7	C4	C5	H5	359.1	360.0
C7	C4	C3	C2	180.5	179.8
C7	C4	C3	H3	0.5	359.8
C4	C7	C8	C9	180.6	180.0
C4	C7	C8	H8	0.6	0.0
C5	C4	C3	C7	178.8	180.2
C3	C4	C5	C6	0.4	359.7
C3	C4	C5	H5	180.4	179.7
C3	C4	C7	C8	182.1	0.2
C4	C3	C2	C1	0.6	0.4
C2	C3	C4	H3	180.0	180.0
C4	C3	C2	H2	180.6	180.1
C6	C5	C4	C7	179.1	180.0
C6	C5	C4	C3	0.4	359.7
C4	C5	C6	H5	180.0	180.0
C5	C6	C1	C2	359.8	0.3
C1	C6	C5	H6	180.0	180.1
C5	C6	C1	H1	179.8	179.9
C1	C6	C5	H5	180.1	180.1
C5	C6	C1	H6	180.0	179.9
C3	C2	C1	C6	359.9	359.4
C6	C1	C2	H2	179.9	179.8
C2	C1	C6	H1	180.0	180.4
C8	C7	N1	N2	0.5	0.1
N1	C7	C8	C4	179.2	179.9
C8	C7	C4	C3	182.1	0.2
C7	C8	C9	C10	359.9	0.0
C9	C8	C7	H8	180.0	180.0
C7	C8	C9	H9	179.9	180.0
N3	C10	C9	C8	180.3	180.0
C7	C8	C9	H8	180.0	180.0
N2	C10	C9	C8	0.1	0.0
C10	C9	C8	H9	180.0	180.0
N1	N2	C10	C11	180.4	180.0
N2	C10	N3	N4	0.3	360.0
N3	C10	N2	C9	179.9	180.0
C8	C9	C10	N2	0.1	0.0
N2	C10	C9	H9	180.1	180.1
C12	C11	N2	C10	180.0	180.0
C10	N2	C11	N4	0.2	0.0
C9	C10	N3	N4	180.2	180.0
N3	C10	C9	N2	180.2	180.0
C10	C9	C8	H8	179.9	180.0
C8	C9	C10	H9	180.0	180.0
C9	C10	N2	C11	179.8	180.0
C14	C13	C16	O1	180.6	180.2
C16	C13	C14	C15	359.7	0.1
C16	C13	C14	H14	179.7	180.0
C16	C13	O1	C12	164.8	180.0
C18	C17	C16	C13	179.8	180.1
C13	C16	C17	N5	359.9	0.1
C17	C16	C13	C21	180.1	179.9
C20	C21	C16	C13	180.5	180.0
C13	C16	C21	H21	0.5	359.9
C16	C13	C14	O1	179.4	179.8
C14	C13	C16	C17	0.2	359.9
C14	C13	C16	C21	180.1	180.0
C14	C13	O1	C12	344.2	359.8
N5	C15	C14	C13	0.3	0.0
C13	C14	C15	H15	180.4	180.0
C15	C14	C13	H14	180.0	180.0
C16	C13	O1	C14	180.6	180.2
O1	C13	C16	C17	179.6	179.7
O1	C13	C16	C21	359.5	359.9
O1	C13	C14	C15	180.3	180.2
O1	C13	C14	H14	0.3	0.2
C13	O1	C12	C11	282.5	179.9
C13	O1	C12	H12	42.5	300.0
C13	O1	C12	H12A	168.2	59.9
C13	C14	C15	N5	0.3	0.0
C14	C15	N5	H15	180.0	180.0
N5	C15	C14	H14	180.4	180.0
C18	C17	N5	C15	180.2	180.0
C16	C17	N5	C15	0.1	360.0
C15	C14	C13	O1	180.3	180.2
C13	C14	C15	H14	180.0	180.0
C14	C15	N5	C17	359.8	360.0
N5	C15	C14	H15	180.0	180.0
C13	C16	C17	C18	179.8	180.1
C15	N5	C17	C18	180.2	180.0
C16	C17	C18	N5	180.1	180.0
C18	C17	C16	C21	359.9	359.9
C20	C19	C18	C17	359.7	360.0
O2	C19	C18	C17	180.1	180.0
C19	C18	C17	H18	180.0	180.0
C17	C16	C13	C14	0.2	359.9
C17	C16	C13	O1	179.6	179.7
C13	C16	C17	C21	179.9	180.1
C15	N5	C17	C16	0.1	360.0
C18	C17	C16	N5	179.9	180.0
C16	C17	C18	C19	360.0	0.0
C16	C17	C18	H18	180.0	180.0
C20	C21	C16	C17	0.5	0.1
C17	C16	C21	H21	180.4	180.0
C17	N5	C15	C14	359.8	360.0
C17	N5	C15	H15	179.7	180.0
C18	C17	N5	C16	180.1	180.0
N5	C17	C18	C19	179.9	180.0
N5	C17	C18	H18	359.9	0.0
N5	C17	C16	C21	180.0	180.0
C13	C16	C21	C20	180.5	180.0
C17	C16	C21	C20	0.5	0.1
C21	C20	C19	O2	180.3	180.0
C21	C20	C19	C18	0.6	0.1
C19	C20	C21	H20	180.0	179.9
C16	C21	C20	H21	180.0	179.9
C17	C18	C19	C20	359.7	360.0
C19	C20	C21	C16	359.3	359.9
C21	C20	C19	H20	180.0	180.1
C19	C20	C21	H21	179.3	180.0
C22	O2	C19	C20	178.8	0.0
O2	C19	C20	C18	179.7	180.0
C20	C19	C18	H18	179.7	180.0
C21	C16	C13	C14	180.1	180.0
C21	C16	C13	O1	359.5	359.9
C13	C16	C21	C17	180.1	179.9
C21	C16	C17	N5	180.0	180.0
C16	C21	C20	C19	359.3	359.9
C16	C21	C20	H20	179.2	179.9
C20	C21	C16	H21	180.0	180.1
C20	C19	O2	C22	178.8	0.0
C22	O2	C19	C18	358.5	180.0
H22	C22	O2	H22A	240.0	240.0
H22	C22	O2	H22B	120.0	119.9
H22A	C22	O2	H22B	240.0	240.0
C17	C18	C19	O2	180.1	180.0
C20	C19	O2	C18	180.3	180.0
O2	C19	C20	H20	0.4	360.0
C19	O2	C22	H22	309.3	299.9
C19	O2	C22	H22A	69.3	60.0
C19	O2	C22	H22B	189.3	180.0
O2	C19	C18	H18	0.0	360.0
C19	C18	C17	C16	360.0	0.0
C19	C18	C17	N5	179.9	180.0
C17	C18	C19	H18	180.0	180.0
C20	C19	C18	O2	179.7	180.0
C18	C19	C20	H20	180.7	180.0
O1	C12	C11	N2	323.3	90.0
O1	C12	C11	N4	143.1	269.9
C11	C12	O1	H12	240.0	239.9
C11	C12	O1	H12A	114.3	120.0
H12	C12	O1	H12A	234.3	240.1
N1	N2	C11	C12	359.6	360.0
N3	N4	C11	C12	180.2	180.0
C10	N2	C11	C12	180.0	180.0
O1	C12	C11	H12	120.0	120.0
O1	C12	C11	H12A	245.7	240.0
N2	C11	C12	N4	180.2	180.1
H12	C12	C11	H12A	125.7	120.0
N1	N2	C11	C10	179.5	180.0
N3	N4	C11	N2	0.0	359.9
C11	N2	C10	C9	179.8	180.0
C12	C11	N2	N4	179.8	179.9
N2	C11	C12	H12	203.3	330.0
N2	C11	C12	H12A	77.6	210.0
C12	C11	N4	N2	180.2	180.1
N4	C11	C12	H12	23.1	150.0
N4	C11	C12	H12A	257.4	30.0
C4	C3	C2	H3	180.0	180.0
C6	C1	C2	C3	359.9	359.4
C1	C2	C3	H2	180.0	180.4
C3	C2	C1	H1	179.9	179.8
C2	C1	C6	H6	179.8	180.4
C6	C1	C2	H1	180.0	179.6
C1	C2	C3	H3	180.6	180.4
C3	C2	C1	H2	180.0	179.6
H5	C5	C4	C7	359.1	360.0
H5	C5	C4	C3	180.4	179.7
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	C1	180.1	180.1
H5	C5	C6	H6	0.1	360.0
C5	C6	H6	C1	180.0	180.1
H6	C6	C5	H5	0.1	360.0
H6	C6	C1	C2	179.8	180.4
H6	C6	C1	H1	359.8	0.1
C7	C8	H8	C9	180.0	180.0
H8	C8	C9	C10	179.9	180.0
H8	C8	C9	H9	359.9	360.0
N5	C15	H15	C14	180.0	180.0
H15	C15	N5	C17	179.7	180.0
H15	C15	C14	H14	0.4	0.0
C21	C20	H20	C19	180.0	179.9
H20	C20	C21	C16	179.2	179.9
H20	C20	C21	H21	359.2	0.0
H20	C20	C19	O2	0.4	360.0
H20	C20	C19	C18	180.7	180.0
H21	C21	C20	C19	179.3	180.0
C20	C21	H21	C16	180.0	179.9
H21	C21	C20	H20	359.2	0.0
H22	C22	O2	C19	309.3	299.9
O2	C22	H22	H22A	120.0	120.1
O2	C22	H22	H22B	240.0	240.0
H22A	C22	H22	H22B	120.0	119.9
H22A	C22	O2	C19	69.3	60.0
O2	C22	H22A	H22	240.0	239.9
O2	C22	H22A	H22B	120.0	120.0
H22	C22	H22A	H22B	240.0	240.1
H22B	C22	O2	C19	189.3	180.0
O2	C22	H22B	H22	120.0	120.0
O2	C22	H22B	H22A	240.0	239.9
H22	C22	H22B	H22A	120.0	120.0
H18	C18	C17	C16	180.0	180.0
H18	C18	C17	N5	359.9	0.0
C17	C18	H18	C19	180.0	180.0
H14	C14	C13	O1	0.3	0.2
C13	C14	H14	C15	180.0	180.0
H14	C14	C15	H15	0.4	0.0
O1	C12	H12	C11	230.5	240.0
O1	C12	H12	H12A	115.3	119.9
H12	C12	C11	N2	203.3	330.0
H12	C12	C11	N4	23.1	150.0
C11	C12	H12	H12A	244.8	240.0
O1	C12	H12A	C11	126.7	120.0
O1	C12	H12A	H12	243.3	240.1
H12A	C12	C11	N2	77.6	210.0
H12A	C12	C11	N4	257.4	30.0
C11	C12	H12A	H12	116.7	120.1
C8	C9	H9	C10	180.0	180.0
H9	C9	C8	H8	359.9	360.0
C4	C3	H3	C2	180.0	180.0
H3	C3	C2	C1	180.6	180.4
H3	C3	C2	H2	0.6	0.0
C3	C2	H2	C1	180.0	180.4
H2	C2	C3	H3	0.6	0.0
H2	C2	C1	H1	359.9	0.2
C6	C1	H1	C2	180.0	180.4
H1	C1	C6	H6	359.8	0.1
H1	C1	C2	H2	359.9	0.2