PDB Chemical Component L4C
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for L4C
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O17 |
C9 |
1.290 |
1.360 |
O17 |
H17 |
0.950 |
0.982 |
C9 |
O16 |
1.211 |
1.223 |
C9 |
C10 |
1.530 |
1.513 |
C10 |
C11 |
1.518 |
1.528 |
C10 |
H101 |
1.115 |
1.095 |
C10 |
H102 |
1.115 |
1.097 |
C11 |
C8 |
1.495 |
1.513 |
C11 |
H111 |
1.115 |
1.095 |
C11 |
H112 |
1.115 |
1.095 |
C8 |
C12 |
1.474 |
1.499 |
C8 |
N1 |
1.295 |
1.294 |
C12 |
O19 |
1.215 |
1.214 |
C12 |
O18 |
1.259 |
1.340 |
O18 |
H18 |
0.950 |
0.981 |
N1 |
O13 |
1.384 |
1.400 |
O13 |
C5 |
1.451 |
1.419 |
C5 |
C3 |
1.527 |
1.521 |
C5 |
H5C1 |
1.115 |
1.096 |
C5 |
H5C2 |
1.115 |
1.095 |
C3 |
N2 |
1.475 |
1.442 |
C3 |
C4 |
1.541 |
1.515 |
C3 |
H3 |
1.115 |
1.096 |
N2 |
C6 |
1.346 |
1.384 |
N2 |
H2 |
1.020 |
1.016 |
C6 |
C7 |
1.533 |
1.493 |
C6 |
O15 |
1.235 |
1.225 |
C7 |
H7C2 |
1.115 |
1.101 |
C7 |
H7C3 |
1.114 |
1.102 |
C7 |
H7C1 |
1.115 |
1.103 |
C4 |
O14 |
1.226 |
1.224 |
C4 |
OXT |
1.420 |
1.359 |
OXT |
HOT |
0.950 |
0.982 |
Bond Angles for L4C
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C9 |
O17 |
H17 |
120.7 |
114.9 |
O17 |
C9 |
O16 |
120.7 |
122.9 |
O17 |
C9 |
C10 |
130.5 |
111.3 |
O16 |
C9 |
C10 |
108.8 |
125.8 |
C9 |
C10 |
C11 |
107.0 |
113.0 |
C9 |
C10 |
H101 |
113.2 |
108.5 |
C9 |
C10 |
H102 |
113.2 |
106.8 |
C11 |
C10 |
H101 |
113.1 |
111.2 |
C11 |
C10 |
H102 |
113.1 |
108.4 |
C10 |
C11 |
C8 |
117.5 |
111.0 |
C10 |
C11 |
H111 |
109.3 |
111.8 |
C10 |
C11 |
H112 |
109.3 |
109.5 |
H101 |
C10 |
H102 |
97.3 |
108.9 |
C8 |
C11 |
H111 |
109.3 |
109.8 |
C8 |
C11 |
H112 |
109.3 |
108.1 |
C11 |
C8 |
C12 |
125.8 |
116.8 |
C11 |
C8 |
N1 |
120.1 |
127.3 |
H111 |
C11 |
H112 |
100.8 |
106.4 |
C12 |
C8 |
N1 |
113.9 |
115.9 |
C8 |
C12 |
O19 |
115.8 |
122.4 |
C8 |
C12 |
O18 |
124.9 |
109.3 |
C8 |
N1 |
O13 |
131.0 |
111.0 |
O19 |
C12 |
O18 |
119.0 |
128.3 |
C12 |
O18 |
H18 |
124.8 |
112.3 |
N1 |
O13 |
C5 |
123.2 |
108.2 |
O13 |
C5 |
C3 |
114.6 |
109.2 |
O13 |
C5 |
H5C1 |
110.3 |
107.8 |
O13 |
C5 |
H5C2 |
110.3 |
108.7 |
C3 |
C5 |
H5C1 |
110.3 |
111.0 |
C3 |
C5 |
H5C2 |
110.3 |
111.6 |
C5 |
C3 |
N2 |
110.4 |
111.7 |
C5 |
C3 |
C4 |
103.4 |
110.5 |
C5 |
C3 |
H3 |
115.9 |
111.8 |
H5C1 |
C5 |
H5C2 |
99.9 |
108.4 |
N2 |
C3 |
C4 |
117.2 |
107.3 |
N2 |
C3 |
H3 |
101.7 |
105.4 |
C3 |
N2 |
C6 |
126.0 |
123.2 |
C3 |
N2 |
H2 |
122.1 |
118.4 |
C4 |
C3 |
H3 |
108.9 |
110.0 |
C3 |
C4 |
O14 |
125.5 |
125.1 |
C3 |
C4 |
OXT |
117.9 |
111.9 |
C6 |
N2 |
H2 |
111.9 |
118.4 |
N2 |
C6 |
C7 |
120.1 |
114.1 |
N2 |
C6 |
O15 |
120.4 |
126.4 |
C7 |
C6 |
O15 |
119.5 |
119.5 |
C6 |
C7 |
H7C2 |
108.4 |
112.4 |
C6 |
C7 |
H7C3 |
120.1 |
115.3 |
C6 |
C7 |
H7C1 |
108.4 |
112.4 |
H7C2 |
C7 |
H7C3 |
108.4 |
105.3 |
H7C1 |
C7 |
H7C2 |
101.6 |
105.3 |
H7C1 |
C7 |
H7C3 |
108.4 |
105.2 |
O14 |
C4 |
OXT |
116.5 |
122.9 |
C4 |
OXT |
HOT |
117.9 |
115.2 |
Torsion Angles for L4C
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O16 |
C9 |
O17 |
C10 |
177.0 |
180.0 |
O17 |
C9 |
C10 |
C11 |
16.1 |
176.2 |
O17 |
C9 |
C10 |
H101 |
250.9 |
299.9 |
O17 |
C9 |
C10 |
H102 |
141.4 |
57.2 |
H17 |
O17 |
C9 |
O16 |
180.0 |
0.0 |
H17 |
O17 |
C9 |
C10 |
3.0 |
180.0 |
O16 |
C9 |
O17 |
H17 |
180.0 |
0.0 |
O17 |
C9 |
O16 |
C10 |
182.4 |
180.0 |
O16 |
C9 |
C10 |
C11 |
198.9 |
356.2 |
O16 |
C9 |
C10 |
H101 |
73.6 |
120.0 |
O16 |
C9 |
C10 |
H102 |
324.1 |
237.2 |
C10 |
C9 |
O17 |
H17 |
3.0 |
180.0 |
O17 |
C9 |
C10 |
O16 |
177.3 |
180.0 |
C11 |
C10 |
C9 |
H101 |
125.2 |
236.3 |
C11 |
C10 |
C9 |
H102 |
234.7 |
119.0 |
C9 |
C10 |
C11 |
C8 |
151.6 |
182.2 |
C9 |
C10 |
C11 |
H111 |
26.4 |
59.2 |
C9 |
C10 |
C11 |
H112 |
276.9 |
301.5 |
H101 |
C10 |
C9 |
H102 |
109.5 |
242.8 |
C9 |
C10 |
C11 |
H101 |
234.7 |
122.2 |
C9 |
C10 |
C11 |
H102 |
125.3 |
241.9 |
H101 |
C10 |
C11 |
H102 |
250.6 |
119.7 |
C8 |
C11 |
C10 |
H111 |
125.2 |
123.0 |
C8 |
C11 |
C10 |
H112 |
234.7 |
240.7 |
C10 |
C11 |
C8 |
C12 |
41.6 |
265.8 |
C10 |
C11 |
C8 |
N1 |
215.6 |
84.0 |
H111 |
C11 |
C10 |
H112 |
109.5 |
117.7 |
C9 |
C10 |
H101 |
C11 |
121.8 |
235.2 |
C9 |
C10 |
H101 |
H102 |
240.9 |
115.8 |
C11 |
C10 |
H101 |
H102 |
119.0 |
240.7 |
H101 |
C10 |
C11 |
C8 |
276.9 |
60.0 |
H101 |
C10 |
C11 |
H111 |
151.6 |
297.0 |
H101 |
C10 |
C11 |
H112 |
42.2 |
179.3 |
C9 |
C10 |
H102 |
C11 |
238.1 |
122.0 |
C9 |
C10 |
H102 |
H101 |
119.1 |
243.1 |
C11 |
C10 |
H102 |
H101 |
241.0 |
121.1 |
H102 |
C10 |
C11 |
C8 |
26.3 |
300.3 |
H102 |
C10 |
C11 |
H111 |
261.1 |
177.3 |
H102 |
C10 |
C11 |
H112 |
151.6 |
59.6 |
C8 |
C11 |
C10 |
H101 |
276.9 |
60.0 |
C8 |
C11 |
C10 |
H102 |
26.3 |
300.3 |
C10 |
C11 |
C8 |
H111 |
234.7 |
235.8 |
C10 |
C11 |
C8 |
H112 |
125.3 |
120.1 |
H111 |
C11 |
C8 |
H112 |
250.5 |
244.3 |
C12 |
C8 |
C11 |
N1 |
186.1 |
181.8 |
C11 |
C8 |
C12 |
O19 |
29.2 |
90.1 |
C11 |
C8 |
C12 |
O18 |
202.7 |
268.6 |
C11 |
C8 |
N1 |
O13 |
3.2 |
0.7 |
H111 |
C11 |
C10 |
H101 |
151.6 |
297.0 |
H111 |
C11 |
C10 |
H102 |
261.1 |
177.3 |
C10 |
C11 |
H111 |
C8 |
129.9 |
123.7 |
C10 |
C11 |
H111 |
H112 |
244.9 |
240.5 |
C8 |
C11 |
H111 |
H112 |
115.1 |
116.8 |
H111 |
C11 |
C8 |
C12 |
166.9 |
29.9 |
H111 |
C11 |
C8 |
N1 |
340.8 |
208.1 |
H112 |
C11 |
C10 |
H101 |
42.2 |
179.3 |
H112 |
C11 |
C10 |
H102 |
151.6 |
59.6 |
C10 |
C11 |
H112 |
C8 |
230.1 |
239.0 |
C10 |
C11 |
H112 |
H111 |
115.1 |
121.1 |
C8 |
C11 |
H112 |
H111 |
245.0 |
242.1 |
H112 |
C11 |
C8 |
C12 |
276.4 |
145.7 |
H112 |
C11 |
C8 |
N1 |
90.3 |
323.9 |
C12 |
C8 |
C11 |
H111 |
166.9 |
29.9 |
C12 |
C8 |
C11 |
H112 |
276.4 |
145.7 |
C11 |
C8 |
C12 |
N1 |
174.3 |
178.4 |
C12 |
C8 |
N1 |
O13 |
177.9 |
178.9 |
O19 |
C12 |
C8 |
O18 |
186.4 |
181.5 |
C8 |
C12 |
O18 |
H18 |
180.0 |
181.6 |
N1 |
C8 |
C11 |
H111 |
340.8 |
208.1 |
N1 |
C8 |
C11 |
H112 |
90.3 |
323.9 |
C11 |
C8 |
N1 |
C12 |
185.4 |
181.8 |
N1 |
C8 |
C12 |
O19 |
214.9 |
271.7 |
N1 |
C8 |
C12 |
O18 |
28.5 |
90.2 |
C8 |
N1 |
O13 |
C5 |
211.5 |
180.0 |
O19 |
C12 |
C8 |
N1 |
214.9 |
271.7 |
C8 |
C12 |
O19 |
O18 |
174.0 |
178.2 |
O19 |
C12 |
O18 |
H18 |
353.4 |
0.0 |
O18 |
C12 |
C8 |
N1 |
28.5 |
90.2 |
C8 |
C12 |
O18 |
O19 |
186.6 |
181.6 |
N1 |
O13 |
C5 |
C3 |
51.6 |
180.1 |
N1 |
O13 |
C5 |
H5C1 |
286.3 |
300.8 |
N1 |
O13 |
C5 |
H5C2 |
176.8 |
58.1 |
C3 |
C5 |
O13 |
H5C1 |
125.3 |
239.3 |
C3 |
C5 |
O13 |
H5C2 |
234.7 |
122.0 |
O13 |
C5 |
C3 |
N2 |
55.1 |
58.1 |
O13 |
C5 |
C3 |
C4 |
289.0 |
298.8 |
O13 |
C5 |
C3 |
H3 |
170.0 |
175.9 |
H5C1 |
C5 |
O13 |
H5C2 |
109.5 |
242.7 |
O13 |
C5 |
C3 |
H5C1 |
234.7 |
118.7 |
O13 |
C5 |
C3 |
H5C2 |
125.3 |
239.8 |
H5C1 |
C5 |
C3 |
H5C2 |
250.5 |
121.0 |
N2 |
C3 |
C5 |
C4 |
126.1 |
119.4 |
N2 |
C3 |
C5 |
H3 |
245.1 |
242.2 |
C5 |
C3 |
N2 |
C6 |
57.3 |
91.6 |
C5 |
C3 |
N2 |
H2 |
237.3 |
271.5 |
C4 |
C3 |
C5 |
H3 |
119.0 |
122.8 |
C5 |
C3 |
C4 |
O14 |
124.2 |
86.1 |
C5 |
C3 |
C4 |
OXT |
307.1 |
268.4 |
O13 |
C5 |
H5C1 |
C3 |
127.7 |
240.4 |
O13 |
C5 |
H5C1 |
H5C2 |
243.8 |
117.5 |
C3 |
C5 |
H5C1 |
H5C2 |
116.2 |
237.1 |
H5C1 |
C5 |
C3 |
N2 |
180.4 |
299.4 |
H5C1 |
C5 |
C3 |
C4 |
54.3 |
180.0 |
H5C1 |
C5 |
C3 |
H3 |
295.2 |
57.2 |
O13 |
C5 |
H5C2 |
C3 |
232.3 |
120.5 |
O13 |
C5 |
H5C2 |
H5C1 |
116.2 |
243.1 |
C3 |
C5 |
H5C2 |
H5C1 |
243.8 |
122.6 |
H5C2 |
C5 |
C3 |
N2 |
289.8 |
178.3 |
H5C2 |
C5 |
C3 |
C4 |
163.7 |
59.0 |
H5C2 |
C5 |
C3 |
H3 |
44.7 |
296.2 |
N2 |
C3 |
C5 |
H5C1 |
180.4 |
299.4 |
N2 |
C3 |
C5 |
H5C2 |
289.8 |
178.3 |
C5 |
C3 |
N2 |
C4 |
242.1 |
238.7 |
C5 |
C3 |
N2 |
H3 |
123.6 |
121.6 |
C4 |
C3 |
N2 |
H3 |
241.4 |
242.8 |
N2 |
C3 |
C4 |
O14 |
2.6 |
324.1 |
N2 |
C3 |
C4 |
OXT |
185.5 |
146.4 |
C6 |
N2 |
C3 |
H2 |
180.0 |
180.0 |
C3 |
N2 |
C6 |
C7 |
164.5 |
179.9 |
C3 |
N2 |
C6 |
O15 |
347.4 |
360.0 |
C4 |
C3 |
C5 |
H5C1 |
54.3 |
180.0 |
C4 |
C3 |
C5 |
H5C2 |
163.7 |
59.0 |
C5 |
C3 |
C4 |
N2 |
121.6 |
122.0 |
C5 |
C3 |
C4 |
H3 |
236.2 |
236.1 |
N2 |
C3 |
C4 |
H3 |
114.6 |
114.1 |
C4 |
C3 |
N2 |
C6 |
175.2 |
212.8 |
C4 |
C3 |
N2 |
H2 |
355.2 |
32.8 |
O14 |
C4 |
C3 |
OXT |
177.1 |
177.7 |
C3 |
C4 |
OXT |
HOT |
180.0 |
177.8 |
H3 |
C3 |
C5 |
H5C1 |
295.2 |
57.2 |
H3 |
C3 |
C5 |
H5C2 |
44.7 |
296.2 |
C5 |
C3 |
H3 |
N2 |
240.3 |
238.5 |
C5 |
C3 |
H3 |
C4 |
116.0 |
123.1 |
N2 |
C3 |
H3 |
C4 |
235.7 |
244.6 |
H3 |
C3 |
N2 |
C6 |
293.7 |
330.0 |
H3 |
C3 |
N2 |
H2 |
113.7 |
150.0 |
H3 |
C3 |
C4 |
O14 |
248.0 |
210.0 |
H3 |
C3 |
C4 |
OXT |
70.9 |
32.3 |
C6 |
N2 |
C3 |
C4 |
175.2 |
212.8 |
C6 |
N2 |
C3 |
H3 |
293.7 |
330.0 |
C3 |
N2 |
C6 |
H2 |
180.0 |
180.0 |
C7 |
C6 |
N2 |
O15 |
177.2 |
179.9 |
N2 |
C6 |
C7 |
H7C2 |
305.3 |
239.4 |
N2 |
C6 |
C7 |
H7C3 |
180.0 |
0.1 |
N2 |
C6 |
C7 |
H7C1 |
54.7 |
120.8 |
H2 |
N2 |
C3 |
C4 |
355.2 |
32.8 |
H2 |
N2 |
C3 |
H3 |
113.7 |
150.0 |
C3 |
N2 |
H2 |
C6 |
180.0 |
180.0 |
H2 |
N2 |
C6 |
C7 |
344.6 |
359.9 |
H2 |
N2 |
C6 |
O15 |
167.4 |
180.0 |
C7 |
C6 |
N2 |
H2 |
344.6 |
359.9 |
N2 |
C6 |
C7 |
O15 |
182.8 |
180.1 |
H7C2 |
C7 |
C6 |
H7C3 |
125.3 |
239.3 |
H7C1 |
C7 |
C6 |
H7C2 |
109.5 |
241.3 |
H7C1 |
C7 |
C6 |
H7C3 |
234.7 |
120.6 |
O15 |
C6 |
N2 |
H2 |
167.4 |
180.0 |
N2 |
C6 |
O15 |
C7 |
177.2 |
179.9 |
O15 |
C6 |
C7 |
H7C2 |
122.5 |
59.4 |
O15 |
C6 |
C7 |
H7C3 |
357.2 |
180.1 |
O15 |
C6 |
C7 |
H7C1 |
231.9 |
300.7 |
H7C2 |
C7 |
C6 |
O15 |
122.5 |
59.4 |
C6 |
C7 |
H7C2 |
H7C3 |
228.1 |
126.3 |
C6 |
C7 |
H7C2 |
H7C1 |
114.0 |
237.2 |
H7C1 |
C7 |
H7C2 |
H7C3 |
114.1 |
249.1 |
H7C3 |
C7 |
C6 |
O15 |
357.2 |
180.1 |
C6 |
C7 |
H7C3 |
H7C2 |
125.3 |
235.5 |
C6 |
C7 |
H7C3 |
H7C1 |
234.8 |
124.5 |
H7C1 |
C7 |
H7C3 |
H7C2 |
250.5 |
111.0 |
H7C1 |
C7 |
C6 |
O15 |
231.9 |
300.7 |
C6 |
C7 |
H7C1 |
H7C2 |
245.9 |
122.8 |
C6 |
C7 |
H7C1 |
H7C3 |
131.8 |
233.7 |
H7C2 |
C7 |
H7C1 |
H7C3 |
245.9 |
110.9 |
O14 |
C4 |
C3 |
H3 |
248.0 |
210.0 |
C3 |
C4 |
O14 |
OXT |
182.9 |
182.5 |
O14 |
C4 |
OXT |
HOT |
2.7 |
0.0 |
OXT |
C4 |
C3 |
H3 |
70.9 |
32.3 |
C3 |
C4 |
OXT |
O14 |
177.4 |
177.8 |