PDB Chemical Component L4C

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for L4C

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O17 C9 1.290 1.360
O17 H17 0.950 0.982
C9 O16 1.211 1.223
C9 C10 1.530 1.513
C10 C11 1.518 1.528
C10 H101 1.115 1.095
C10 H102 1.115 1.097
C11 C8 1.495 1.513
C11 H111 1.115 1.095
C11 H112 1.115 1.095
C8 C12 1.474 1.499
C8 N1 1.295 1.294
C12 O19 1.215 1.214
C12 O18 1.259 1.340
O18 H18 0.950 0.981
N1 O13 1.384 1.400
O13 C5 1.451 1.419
C5 C3 1.527 1.521
C5 H5C1 1.115 1.096
C5 H5C2 1.115 1.095
C3 N2 1.475 1.442
C3 C4 1.541 1.515
C3 H3 1.115 1.096
N2 C6 1.346 1.384
N2 H2 1.020 1.016
C6 C7 1.533 1.493
C6 O15 1.235 1.225
C7 H7C2 1.115 1.101
C7 H7C3 1.114 1.102
C7 H7C1 1.115 1.103
C4 O14 1.226 1.224
C4 OXT 1.420 1.359
OXT HOT 0.950 0.982

Bond Angles for L4C

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C9 O17 H17 120.7 114.9
O17 C9 O16 120.7 122.9
O17 C9 C10 130.5 111.3
O16 C9 C10 108.8 125.8
C9 C10 C11 107.0 113.0
C9 C10 H101 113.2 108.5
C9 C10 H102 113.2 106.8
C11 C10 H101 113.1 111.2
C11 C10 H102 113.1 108.4
C10 C11 C8 117.5 111.0
C10 C11 H111 109.3 111.8
C10 C11 H112 109.3 109.5
H101 C10 H102 97.3 108.9
C8 C11 H111 109.3 109.8
C8 C11 H112 109.3 108.1
C11 C8 C12 125.8 116.8
C11 C8 N1 120.1 127.3
H111 C11 H112 100.8 106.4
C12 C8 N1 113.9 115.9
C8 C12 O19 115.8 122.4
C8 C12 O18 124.9 109.3
C8 N1 O13 131.0 111.0
O19 C12 O18 119.0 128.3
C12 O18 H18 124.8 112.3
N1 O13 C5 123.2 108.2
O13 C5 C3 114.6 109.2
O13 C5 H5C1 110.3 107.8
O13 C5 H5C2 110.3 108.7
C3 C5 H5C1 110.3 111.0
C3 C5 H5C2 110.3 111.6
C5 C3 N2 110.4 111.7
C5 C3 C4 103.4 110.5
C5 C3 H3 115.9 111.8
H5C1 C5 H5C2 99.9 108.4
N2 C3 C4 117.2 107.3
N2 C3 H3 101.7 105.4
C3 N2 C6 126.0 123.2
C3 N2 H2 122.1 118.4
C4 C3 H3 108.9 110.0
C3 C4 O14 125.5 125.1
C3 C4 OXT 117.9 111.9
C6 N2 H2 111.9 118.4
N2 C6 C7 120.1 114.1
N2 C6 O15 120.4 126.4
C7 C6 O15 119.5 119.5
C6 C7 H7C2 108.4 112.4
C6 C7 H7C3 120.1 115.3
C6 C7 H7C1 108.4 112.4
H7C2 C7 H7C3 108.4 105.3
H7C1 C7 H7C2 101.6 105.3
H7C1 C7 H7C3 108.4 105.2
O14 C4 OXT 116.5 122.9
C4 OXT HOT 117.9 115.2

Torsion Angles for L4C

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O16 C9 O17 C10 177.0 180.0
O17 C9 C10 C11 16.1 176.2
O17 C9 C10 H101 250.9 299.9
O17 C9 C10 H102 141.4 57.2
H17 O17 C9 O16 180.0 0.0
H17 O17 C9 C10 3.0 180.0
O16 C9 O17 H17 180.0 0.0
O17 C9 O16 C10 182.4 180.0
O16 C9 C10 C11 198.9 356.2
O16 C9 C10 H101 73.6 120.0
O16 C9 C10 H102 324.1 237.2
C10 C9 O17 H17 3.0 180.0
O17 C9 C10 O16 177.3 180.0
C11 C10 C9 H101 125.2 236.3
C11 C10 C9 H102 234.7 119.0
C9 C10 C11 C8 151.6 182.2
C9 C10 C11 H111 26.4 59.2
C9 C10 C11 H112 276.9 301.5
H101 C10 C9 H102 109.5 242.8
C9 C10 C11 H101 234.7 122.2
C9 C10 C11 H102 125.3 241.9
H101 C10 C11 H102 250.6 119.7
C8 C11 C10 H111 125.2 123.0
C8 C11 C10 H112 234.7 240.7
C10 C11 C8 C12 41.6 265.8
C10 C11 C8 N1 215.6 84.0
H111 C11 C10 H112 109.5 117.7
C9 C10 H101 C11 121.8 235.2
C9 C10 H101 H102 240.9 115.8
C11 C10 H101 H102 119.0 240.7
H101 C10 C11 C8 276.9 60.0
H101 C10 C11 H111 151.6 297.0
H101 C10 C11 H112 42.2 179.3
C9 C10 H102 C11 238.1 122.0
C9 C10 H102 H101 119.1 243.1
C11 C10 H102 H101 241.0 121.1
H102 C10 C11 C8 26.3 300.3
H102 C10 C11 H111 261.1 177.3
H102 C10 C11 H112 151.6 59.6
C8 C11 C10 H101 276.9 60.0
C8 C11 C10 H102 26.3 300.3
C10 C11 C8 H111 234.7 235.8
C10 C11 C8 H112 125.3 120.1
H111 C11 C8 H112 250.5 244.3
C12 C8 C11 N1 186.1 181.8
C11 C8 C12 O19 29.2 90.1
C11 C8 C12 O18 202.7 268.6
C11 C8 N1 O13 3.2 0.7
H111 C11 C10 H101 151.6 297.0
H111 C11 C10 H102 261.1 177.3
C10 C11 H111 C8 129.9 123.7
C10 C11 H111 H112 244.9 240.5
C8 C11 H111 H112 115.1 116.8
H111 C11 C8 C12 166.9 29.9
H111 C11 C8 N1 340.8 208.1
H112 C11 C10 H101 42.2 179.3
H112 C11 C10 H102 151.6 59.6
C10 C11 H112 C8 230.1 239.0
C10 C11 H112 H111 115.1 121.1
C8 C11 H112 H111 245.0 242.1
H112 C11 C8 C12 276.4 145.7
H112 C11 C8 N1 90.3 323.9
C12 C8 C11 H111 166.9 29.9
C12 C8 C11 H112 276.4 145.7
C11 C8 C12 N1 174.3 178.4
C12 C8 N1 O13 177.9 178.9
O19 C12 C8 O18 186.4 181.5
C8 C12 O18 H18 180.0 181.6
N1 C8 C11 H111 340.8 208.1
N1 C8 C11 H112 90.3 323.9
C11 C8 N1 C12 185.4 181.8
N1 C8 C12 O19 214.9 271.7
N1 C8 C12 O18 28.5 90.2
C8 N1 O13 C5 211.5 180.0
O19 C12 C8 N1 214.9 271.7
C8 C12 O19 O18 174.0 178.2
O19 C12 O18 H18 353.4 0.0
O18 C12 C8 N1 28.5 90.2
C8 C12 O18 O19 186.6 181.6
N1 O13 C5 C3 51.6 180.1
N1 O13 C5 H5C1 286.3 300.8
N1 O13 C5 H5C2 176.8 58.1
C3 C5 O13 H5C1 125.3 239.3
C3 C5 O13 H5C2 234.7 122.0
O13 C5 C3 N2 55.1 58.1
O13 C5 C3 C4 289.0 298.8
O13 C5 C3 H3 170.0 175.9
H5C1 C5 O13 H5C2 109.5 242.7
O13 C5 C3 H5C1 234.7 118.7
O13 C5 C3 H5C2 125.3 239.8
H5C1 C5 C3 H5C2 250.5 121.0
N2 C3 C5 C4 126.1 119.4
N2 C3 C5 H3 245.1 242.2
C5 C3 N2 C6 57.3 91.6
C5 C3 N2 H2 237.3 271.5
C4 C3 C5 H3 119.0 122.8
C5 C3 C4 O14 124.2 86.1
C5 C3 C4 OXT 307.1 268.4
O13 C5 H5C1 C3 127.7 240.4
O13 C5 H5C1 H5C2 243.8 117.5
C3 C5 H5C1 H5C2 116.2 237.1
H5C1 C5 C3 N2 180.4 299.4
H5C1 C5 C3 C4 54.3 180.0
H5C1 C5 C3 H3 295.2 57.2
O13 C5 H5C2 C3 232.3 120.5
O13 C5 H5C2 H5C1 116.2 243.1
C3 C5 H5C2 H5C1 243.8 122.6
H5C2 C5 C3 N2 289.8 178.3
H5C2 C5 C3 C4 163.7 59.0
H5C2 C5 C3 H3 44.7 296.2
N2 C3 C5 H5C1 180.4 299.4
N2 C3 C5 H5C2 289.8 178.3
C5 C3 N2 C4 242.1 238.7
C5 C3 N2 H3 123.6 121.6
C4 C3 N2 H3 241.4 242.8
N2 C3 C4 O14 2.6 324.1
N2 C3 C4 OXT 185.5 146.4
C6 N2 C3 H2 180.0 180.0
C3 N2 C6 C7 164.5 179.9
C3 N2 C6 O15 347.4 360.0
C4 C3 C5 H5C1 54.3 180.0
C4 C3 C5 H5C2 163.7 59.0
C5 C3 C4 N2 121.6 122.0
C5 C3 C4 H3 236.2 236.1
N2 C3 C4 H3 114.6 114.1
C4 C3 N2 C6 175.2 212.8
C4 C3 N2 H2 355.2 32.8
O14 C4 C3 OXT 177.1 177.7
C3 C4 OXT HOT 180.0 177.8
H3 C3 C5 H5C1 295.2 57.2
H3 C3 C5 H5C2 44.7 296.2
C5 C3 H3 N2 240.3 238.5
C5 C3 H3 C4 116.0 123.1
N2 C3 H3 C4 235.7 244.6
H3 C3 N2 C6 293.7 330.0
H3 C3 N2 H2 113.7 150.0
H3 C3 C4 O14 248.0 210.0
H3 C3 C4 OXT 70.9 32.3
C6 N2 C3 C4 175.2 212.8
C6 N2 C3 H3 293.7 330.0
C3 N2 C6 H2 180.0 180.0
C7 C6 N2 O15 177.2 179.9
N2 C6 C7 H7C2 305.3 239.4
N2 C6 C7 H7C3 180.0 0.1
N2 C6 C7 H7C1 54.7 120.8
H2 N2 C3 C4 355.2 32.8
H2 N2 C3 H3 113.7 150.0
C3 N2 H2 C6 180.0 180.0
H2 N2 C6 C7 344.6 359.9
H2 N2 C6 O15 167.4 180.0
C7 C6 N2 H2 344.6 359.9
N2 C6 C7 O15 182.8 180.1
H7C2 C7 C6 H7C3 125.3 239.3
H7C1 C7 C6 H7C2 109.5 241.3
H7C1 C7 C6 H7C3 234.7 120.6
O15 C6 N2 H2 167.4 180.0
N2 C6 O15 C7 177.2 179.9
O15 C6 C7 H7C2 122.5 59.4
O15 C6 C7 H7C3 357.2 180.1
O15 C6 C7 H7C1 231.9 300.7
H7C2 C7 C6 O15 122.5 59.4
C6 C7 H7C2 H7C3 228.1 126.3
C6 C7 H7C2 H7C1 114.0 237.2
H7C1 C7 H7C2 H7C3 114.1 249.1
H7C3 C7 C6 O15 357.2 180.1
C6 C7 H7C3 H7C2 125.3 235.5
C6 C7 H7C3 H7C1 234.8 124.5
H7C1 C7 H7C3 H7C2 250.5 111.0
H7C1 C7 C6 O15 231.9 300.7
C6 C7 H7C1 H7C2 245.9 122.8
C6 C7 H7C1 H7C3 131.8 233.7
H7C2 C7 H7C1 H7C3 245.9 110.9
O14 C4 C3 H3 248.0 210.0
C3 C4 O14 OXT 182.9 182.5
O14 C4 OXT HOT 2.7 0.0
OXT C4 C3 H3 70.9 32.3
C3 C4 OXT O14 177.4 177.8