PDB Chemical Component L33
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for L33
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C26 |
C5 |
1.509 |
1.507 |
C23 |
C22 |
1.515 |
1.530 |
O19 |
S18 |
1.425 |
1.420 |
C5 |
N6 |
1.347 |
1.340 |
C5 |
C4 |
1.475 |
1.386 |
C22 |
N21 |
1.458 |
1.465 |
N6 |
C7 |
1.346 |
1.378 |
O28 |
C27 |
1.230 |
1.213 |
O9 |
C8 |
1.223 |
1.216 |
C4 |
C27 |
1.491 |
1.466 |
C4 |
C3 |
1.392 |
1.416 |
C27 |
C29 |
1.507 |
1.507 |
N21 |
S18 |
1.540 |
1.657 |
N21 |
C24 |
1.464 |
1.465 |
C7 |
C8 |
1.501 |
1.469 |
C7 |
C3 |
1.489 |
1.362 |
S18 |
O20 |
1.448 |
1.421 |
S18 |
C13 |
1.617 |
1.762 |
C8 |
N10 |
1.336 |
1.347 |
C3 |
C2 |
1.509 |
1.507 |
C24 |
C25 |
1.510 |
1.530 |
C12 |
C13 |
1.406 |
1.381 |
C12 |
C11 |
1.418 |
1.389 |
C13 |
C14 |
1.392 |
1.384 |
N10 |
C11 |
1.373 |
1.398 |
C2 |
C1 |
1.511 |
1.530 |
C11 |
C16 |
1.398 |
1.389 |
C14 |
C15 |
1.396 |
1.382 |
C16 |
C15 |
1.393 |
1.382 |
C15 |
H1 |
1.080 |
1.080 |
C14 |
H2 |
1.080 |
1.080 |
C12 |
H3 |
1.080 |
1.079 |
C16 |
H4 |
1.080 |
1.080 |
C26 |
H5 |
1.100 |
1.090 |
C26 |
H6 |
1.100 |
1.090 |
C26 |
H7 |
1.101 |
1.091 |
C29 |
H8 |
1.100 |
1.090 |
C29 |
H9 |
1.100 |
1.090 |
C29 |
H10 |
1.100 |
1.090 |
C1 |
H11 |
1.100 |
1.089 |
C1 |
H12 |
1.100 |
1.090 |
C1 |
H13 |
1.100 |
1.090 |
C23 |
H14 |
1.099 |
1.090 |
C23 |
H15 |
1.100 |
1.091 |
C23 |
H16 |
1.100 |
1.091 |
C25 |
H17 |
1.100 |
1.090 |
C25 |
H18 |
1.100 |
1.091 |
C25 |
H19 |
1.100 |
1.089 |
C2 |
H20 |
1.100 |
1.091 |
C2 |
H21 |
1.100 |
1.090 |
C22 |
H22 |
1.100 |
1.091 |
C22 |
H23 |
1.100 |
1.090 |
C24 |
H24 |
1.100 |
1.089 |
C24 |
H25 |
1.100 |
1.090 |
N6 |
H26 |
1.000 |
0.970 |
N10 |
H27 |
1.000 |
0.970 |
Bond Angles for L33
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C26 |
C5 |
N6 |
125.9 |
125.9 |
C23 |
C22 |
N21 |
109.5 |
109.5 |
C22 |
C23 |
H14 |
109.5 |
109.5 |
C22 |
C23 |
H15 |
109.5 |
109.4 |
C22 |
C23 |
H16 |
109.5 |
109.5 |
C23 |
C22 |
H22 |
109.5 |
109.4 |
C23 |
C22 |
H23 |
109.5 |
109.5 |
N21 |
S18 |
O19 |
113.6 |
106.4 |
O19 |
S18 |
O20 |
108.9 |
123.2 |
C5 |
N6 |
H26 |
124.6 |
125.3 |
C5 |
C4 |
C27 |
122.2 |
126.6 |
C22 |
N21 |
S18 |
120.4 |
120.0 |
C22 |
N21 |
C24 |
120.0 |
120.0 |
N21 |
C22 |
H22 |
109.5 |
109.5 |
N21 |
C22 |
H23 |
109.5 |
109.5 |
C3 |
C4 |
C27 |
129.3 |
126.5 |
C4 |
C27 |
C29 |
116.2 |
120.0 |
C4 |
C3 |
C2 |
127.6 |
126.5 |
C27 |
C29 |
H8 |
109.5 |
109.4 |
C27 |
C29 |
H9 |
109.5 |
109.5 |
C27 |
C29 |
H10 |
109.4 |
109.5 |
N21 |
S18 |
O20 |
106.7 |
106.4 |
N21 |
C24 |
H24 |
109.4 |
109.5 |
N21 |
C24 |
H25 |
109.4 |
109.4 |
C7 |
C8 |
N10 |
123.7 |
120.0 |
C7 |
C3 |
C2 |
128.4 |
126.5 |
C8 |
N10 |
H27 |
118.3 |
120.0 |
C3 |
C2 |
C1 |
108.5 |
109.5 |
C3 |
C2 |
H20 |
109.7 |
109.4 |
C3 |
C2 |
H21 |
109.7 |
109.5 |
C24 |
C25 |
H17 |
109.5 |
109.5 |
C24 |
C25 |
H18 |
109.5 |
109.4 |
C24 |
C25 |
H19 |
109.5 |
109.5 |
C11 |
C12 |
C13 |
120.6 |
119.9 |
C13 |
C12 |
H3 |
119.7 |
120.0 |
C12 |
C11 |
C16 |
118.7 |
119.9 |
C11 |
C12 |
H3 |
119.7 |
120.0 |
C13 |
C14 |
H2 |
120.1 |
119.9 |
C2 |
C1 |
H11 |
109.5 |
109.5 |
C2 |
C1 |
H12 |
109.4 |
109.4 |
C2 |
C1 |
H13 |
109.5 |
109.5 |
C11 |
C16 |
H4 |
119.9 |
120.0 |
C14 |
C15 |
H1 |
119.5 |
120.0 |
C16 |
C15 |
H1 |
119.5 |
119.9 |
H5 |
C26 |
H6 |
109.5 |
109.5 |
H5 |
C26 |
H7 |
109.5 |
109.5 |
H6 |
C26 |
H7 |
109.4 |
109.4 |
H8 |
C29 |
H9 |
109.4 |
109.5 |
H8 |
C29 |
H10 |
109.5 |
109.5 |
H9 |
C29 |
H10 |
109.5 |
109.5 |
H11 |
C1 |
H12 |
109.5 |
109.5 |
H11 |
C1 |
H13 |
109.4 |
109.5 |
H12 |
C1 |
H13 |
109.5 |
109.5 |
H14 |
C23 |
H15 |
109.5 |
109.4 |
H14 |
C23 |
H16 |
109.5 |
109.5 |
H15 |
C23 |
H16 |
109.4 |
109.5 |
H17 |
C25 |
H18 |
109.5 |
109.4 |
H17 |
C25 |
H19 |
109.5 |
109.5 |
H18 |
C25 |
H19 |
109.4 |
109.5 |
H20 |
C2 |
H21 |
109.4 |
109.5 |
H22 |
C22 |
H23 |
109.4 |
109.4 |
H24 |
C24 |
H25 |
109.5 |
109.5 |
Torsion Angles for L33
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C26 |
C5 |
N6 |
H26 |
1.1 |
359.6 |
C23 |
C22 |
N21 |
S18 |
227.6 |
94.9 |
C23 |
C22 |
N21 |
C24 |
47.6 |
275.0 |
N21 |
C22 |
C23 |
H22 |
240.0 |
240.0 |
N21 |
C22 |
C23 |
H23 |
120.0 |
120.0 |
H14 |
C23 |
C22 |
H15 |
240.0 |
240.0 |
H14 |
C23 |
C22 |
H16 |
120.0 |
120.1 |
H15 |
C23 |
C22 |
H16 |
240.0 |
240.0 |
H22 |
C22 |
C23 |
H23 |
240.0 |
240.0 |
C22 |
N21 |
S18 |
O19 |
31.6 |
336.5 |
N21 |
S18 |
O19 |
O20 |
118.7 |
237.0 |
N6 |
C5 |
C4 |
C27 |
182.2 |
179.8 |
C3 |
C4 |
C5 |
C27 |
178.3 |
179.7 |
C5 |
C4 |
C27 |
C29 |
153.8 |
265.3 |
C5 |
C4 |
C3 |
C2 |
179.0 |
180.2 |
N21 |
C22 |
C23 |
H14 |
180.0 |
300.0 |
N21 |
C22 |
C23 |
H15 |
300.0 |
60.0 |
N21 |
C22 |
C23 |
H16 |
60.0 |
180.0 |
C23 |
C22 |
N21 |
H22 |
120.0 |
120.0 |
C23 |
C22 |
N21 |
H23 |
240.0 |
239.9 |
C22 |
N21 |
S18 |
O20 |
151.5 |
203.5 |
C22 |
N21 |
C24 |
H24 |
190.4 |
325.0 |
C22 |
N21 |
C24 |
H25 |
310.4 |
205.0 |
H22 |
C22 |
N21 |
H23 |
119.9 |
120.0 |
N6 |
C7 |
C8 |
N10 |
155.1 |
360.0 |
O28 |
C27 |
C29 |
H8 |
0.0 |
235.0 |
O28 |
C27 |
C29 |
H9 |
120.0 |
354.9 |
O28 |
C27 |
C29 |
H10 |
240.0 |
115.0 |
O9 |
C8 |
N10 |
H27 |
162.7 |
184.6 |
C27 |
C4 |
C3 |
C2 |
357.2 |
360.0 |
C4 |
C27 |
C29 |
H8 |
184.7 |
55.0 |
C4 |
C27 |
C29 |
H9 |
304.6 |
175.0 |
C4 |
C27 |
C29 |
H10 |
64.6 |
295.0 |
C5 |
C4 |
C3 |
C27 |
181.8 |
180.3 |
C3 |
C4 |
C27 |
C29 |
335.9 |
85.6 |
C7 |
C3 |
C4 |
C2 |
180.6 |
180.0 |
C4 |
C3 |
C2 |
C1 |
296.0 |
90.0 |
C4 |
C3 |
C2 |
H20 |
55.8 |
210.0 |
C4 |
C3 |
C2 |
H21 |
176.1 |
330.0 |
H8 |
C29 |
C27 |
H9 |
240.0 |
240.0 |
H8 |
C29 |
C27 |
H10 |
120.0 |
120.0 |
H9 |
C29 |
C27 |
H10 |
240.0 |
240.0 |
O19 |
S18 |
N21 |
O20 |
240.0 |
133.0 |
C22 |
N21 |
S18 |
C24 |
180.0 |
180.0 |
S18 |
N21 |
C22 |
H22 |
107.5 |
335.0 |
S18 |
N21 |
C22 |
H23 |
347.6 |
215.0 |
S18 |
N21 |
C24 |
H24 |
10.5 |
145.0 |
S18 |
N21 |
C24 |
H25 |
130.4 |
25.0 |
C22 |
N21 |
C24 |
S18 |
180.0 |
180.0 |
C24 |
N21 |
C22 |
H22 |
287.6 |
155.0 |
C24 |
N21 |
C22 |
H23 |
167.6 |
35.0 |
N21 |
C24 |
C25 |
H17 |
180.0 |
180.0 |
N21 |
C24 |
C25 |
H18 |
300.0 |
300.0 |
N21 |
C24 |
C25 |
H19 |
60.0 |
59.9 |
H24 |
C24 |
N21 |
H25 |
240.1 |
120.0 |
C8 |
C7 |
C3 |
C2 |
1.4 |
0.0 |
C7 |
C8 |
N10 |
H27 |
342.1 |
4.6 |
C7 |
C3 |
C4 |
C27 |
177.8 |
180.0 |
C4 |
C3 |
C7 |
C2 |
179.4 |
180.0 |
C7 |
C3 |
C2 |
C1 |
115.2 |
270.0 |
C7 |
C3 |
C2 |
H20 |
235.1 |
30.0 |
C7 |
C3 |
C2 |
H21 |
355.4 |
150.0 |
N21 |
S18 |
O20 |
O19 |
237.1 |
123.0 |
S18 |
C13 |
C12 |
H3 |
0.4 |
0.3 |
S18 |
C13 |
C14 |
H2 |
0.1 |
359.8 |
C2 |
C3 |
C4 |
C27 |
357.2 |
360.0 |
C3 |
C2 |
C1 |
H11 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
H12 |
300.0 |
300.0 |
C3 |
C2 |
C1 |
H13 |
60.0 |
60.0 |
H20 |
C2 |
C3 |
H21 |
239.7 |
240.0 |
H17 |
C25 |
C24 |
H18 |
240.0 |
240.1 |
H17 |
C25 |
C24 |
H19 |
120.0 |
120.1 |
H18 |
C25 |
C24 |
H19 |
240.0 |
240.0 |
C13 |
C12 |
C11 |
C16 |
359.8 |
0.2 |
C11 |
C12 |
C13 |
H3 |
180.0 |
179.7 |
C12 |
C13 |
C14 |
H2 |
181.3 |
180.0 |
C13 |
C12 |
C11 |
H3 |
180.0 |
180.3 |
C12 |
C11 |
C16 |
H4 |
180.7 |
180.0 |
C13 |
C14 |
C15 |
H1 |
179.3 |
180.1 |
N10 |
C11 |
C12 |
H3 |
1.7 |
359.7 |
N10 |
C11 |
C16 |
H4 |
359.0 |
0.2 |
C3 |
C2 |
C1 |
H20 |
119.9 |
120.0 |
C3 |
C2 |
C1 |
H21 |
240.1 |
240.0 |
H11 |
C1 |
C2 |
H12 |
240.0 |
240.0 |
H11 |
C1 |
C2 |
H13 |
120.0 |
120.0 |
H12 |
C1 |
C2 |
H13 |
240.0 |
240.0 |
C16 |
C11 |
C12 |
C13 |
359.8 |
0.2 |
C16 |
C11 |
C12 |
H3 |
179.8 |
179.9 |
C11 |
C16 |
C15 |
H1 |
179.8 |
179.9 |
C16 |
C15 |
C14 |
H1 |
180.0 |
180.3 |
C14 |
C15 |
C16 |
H1 |
180.0 |
179.7 |
H2 |
C14 |
C15 |
H1 |
359.3 |
360.0 |
C11 |
C12 |
H3 |
C13 |
180.0 |
180.3 |
H3 |
C12 |
C11 |
C16 |
179.8 |
179.9 |
H4 |
C16 |
C15 |
H1 |
359.7 |
0.0 |
H5 |
C26 |
C5 |
N6 |
89.1 |
95.3 |
H6 |
C26 |
H5 |
H7 |
120.0 |
119.9 |
H6 |
C26 |
C5 |
N6 |
209.2 |
215.3 |
H5 |
C26 |
H6 |
H7 |
240.0 |
240.0 |
H7 |
C26 |
C5 |
N6 |
329.1 |
335.3 |
H5 |
C26 |
H7 |
H6 |
120.0 |
120.0 |
C27 |
C29 |
H8 |
H9 |
120.0 |
120.0 |
C27 |
C29 |
H8 |
H10 |
240.0 |
240.0 |
H9 |
C29 |
H8 |
H10 |
120.0 |
120.0 |
C27 |
C29 |
H9 |
H8 |
240.0 |
240.1 |
C27 |
C29 |
H9 |
H10 |
120.0 |
120.0 |
H8 |
C29 |
H9 |
H10 |
240.0 |
240.0 |
C27 |
C29 |
H10 |
H8 |
120.0 |
120.0 |
C27 |
C29 |
H10 |
H9 |
240.0 |
240.0 |
H8 |
C29 |
H10 |
H9 |
120.0 |
120.0 |
C2 |
C1 |
H11 |
H12 |
120.0 |
120.0 |
C2 |
C1 |
H11 |
H13 |
240.0 |
240.0 |
H12 |
C1 |
H11 |
H13 |
120.0 |
120.0 |
C2 |
C1 |
H12 |
H11 |
240.0 |
240.0 |
C2 |
C1 |
H12 |
H13 |
120.0 |
120.0 |
H11 |
C1 |
H12 |
H13 |
240.0 |
240.0 |
C2 |
C1 |
H13 |
H11 |
120.0 |
120.0 |
C2 |
C1 |
H13 |
H12 |
240.0 |
240.0 |
H11 |
C1 |
H13 |
H12 |
120.0 |
120.0 |
H14 |
C23 |
C22 |
N21 |
180.0 |
300.0 |
C22 |
C23 |
H14 |
H15 |
120.0 |
120.0 |
C22 |
C23 |
H14 |
H16 |
240.0 |
239.9 |
H14 |
C23 |
C22 |
H22 |
300.0 |
60.0 |
H14 |
C23 |
C22 |
H23 |
60.0 |
180.0 |
H15 |
C23 |
H14 |
H16 |
119.9 |
120.0 |
H15 |
C23 |
C22 |
N21 |
300.0 |
60.0 |
C22 |
C23 |
H15 |
H14 |
240.0 |
240.0 |
C22 |
C23 |
H15 |
H16 |
120.0 |
120.0 |
H15 |
C23 |
C22 |
H22 |
60.0 |
180.0 |
H15 |
C23 |
C22 |
H23 |
180.0 |
300.0 |
H14 |
C23 |
H15 |
H16 |
240.0 |
240.0 |
H16 |
C23 |
C22 |
N21 |
60.0 |
180.0 |
C22 |
C23 |
H16 |
H14 |
120.0 |
120.1 |
C22 |
C23 |
H16 |
H15 |
240.0 |
240.0 |
H16 |
C23 |
C22 |
H22 |
180.0 |
300.0 |
H16 |
C23 |
C22 |
H23 |
300.0 |
59.9 |
H14 |
C23 |
H16 |
H15 |
120.0 |
120.0 |
C24 |
C25 |
H17 |
H18 |
120.0 |
119.9 |
C24 |
C25 |
H17 |
H19 |
240.0 |
239.9 |
H18 |
C25 |
H17 |
H19 |
120.0 |
120.0 |
C24 |
C25 |
H18 |
H17 |
240.0 |
240.0 |
C24 |
C25 |
H18 |
H19 |
120.0 |
120.0 |
H17 |
C25 |
H18 |
H19 |
240.0 |
240.0 |
C24 |
C25 |
H19 |
H17 |
120.0 |
120.1 |
C24 |
C25 |
H19 |
H18 |
240.0 |
240.1 |
H17 |
C25 |
H19 |
H18 |
120.0 |
120.0 |
C3 |
C2 |
H20 |
C1 |
240.9 |
240.0 |
C3 |
C2 |
H20 |
H21 |
120.5 |
120.0 |
H20 |
C2 |
C1 |
H11 |
60.1 |
60.0 |
H20 |
C2 |
C1 |
H12 |
180.1 |
180.0 |
H20 |
C2 |
C1 |
H13 |
300.1 |
300.0 |
C3 |
C2 |
H21 |
C1 |
119.1 |
120.0 |
C3 |
C2 |
H21 |
H20 |
239.5 |
240.1 |
H21 |
C2 |
C1 |
H11 |
299.8 |
300.0 |
H21 |
C2 |
C1 |
H12 |
59.8 |
60.0 |
H21 |
C2 |
C1 |
H13 |
179.9 |
180.0 |
C23 |
C22 |
H22 |
N21 |
240.0 |
240.0 |
H22 |
C22 |
C23 |
H14 |
300.0 |
60.0 |
H22 |
C22 |
C23 |
H15 |
60.0 |
180.0 |
H22 |
C22 |
C23 |
H16 |
180.0 |
300.0 |
C23 |
C22 |
H22 |
H23 |
120.0 |
120.0 |
H22 |
C22 |
N21 |
S18 |
107.5 |
335.0 |
H22 |
C22 |
N21 |
C24 |
287.6 |
155.0 |
N21 |
C22 |
H22 |
H23 |
240.0 |
240.0 |
C23 |
C22 |
H23 |
N21 |
120.0 |
120.0 |
H23 |
C22 |
C23 |
H14 |
60.0 |
180.0 |
H23 |
C22 |
C23 |
H15 |
180.0 |
300.0 |
H23 |
C22 |
C23 |
H16 |
300.0 |
59.9 |
C23 |
C22 |
H23 |
H22 |
240.0 |
240.0 |
H23 |
C22 |
N21 |
S18 |
347.6 |
215.0 |
H23 |
C22 |
N21 |
C24 |
167.6 |
35.0 |
N21 |
C22 |
H23 |
H22 |
120.0 |
120.0 |
N21 |
C24 |
H24 |
H25 |
119.8 |
240.0 |
H24 |
C24 |
C25 |
H17 |
60.0 |
300.1 |
H24 |
C24 |
C25 |
H18 |
180.0 |
60.0 |
H24 |
C24 |
C25 |
H19 |
300.0 |
180.0 |
N21 |
C24 |
H25 |
H24 |
240.2 |
120.0 |
H25 |
C24 |
C25 |
H17 |
300.0 |
60.1 |
H25 |
C24 |
C25 |
H18 |
60.0 |
180.0 |
H25 |
C24 |
C25 |
H19 |
180.0 |
300.0 |