PDB Chemical Component L24

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for L24

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N2A C2 1.342 1.385
N2A HN21 1.019 0.970
N2A HN22 1.021 0.969
N1 C2 1.396 1.324
N1 C6 1.381 1.331
C2 N3 1.389 1.323
N3 C4 1.342 1.330
C4 O4A 1.233 1.355
C4 C5 1.526 1.391
O4A HO4 0.950 0.967
C5 C6 1.367 1.387
C5 C10 1.538 1.504
C6 N7 1.375 1.386
N7 C8 1.386 1.469
N7 HN7 1.020 0.971
C8 C9 1.522 1.533
C8 H81 1.115 1.090
C8 H82 1.115 1.090
C9 C10 1.530 1.529
C9 C11 1.540 1.530
C9 H9 1.115 1.090
C10 H101 1.115 1.090
C10 H102 1.115 1.090
C11 C12 1.520 1.529
C11 H111 1.115 1.089
C11 H112 1.115 1.090
C12 C1B 1.470 1.506
C12 H121 1.114 1.090
C12 H122 1.115 1.090
C1B C2B 1.377 1.383
C1B C6B 1.387 1.384
C2B C3B 1.389 1.380
C2B H2B 1.103 1.078
C3B C4B 1.386 1.397
C3B H3B 1.103 1.080
C4B C5B 1.385 1.394
C4B C7B 1.528 1.478
C5B C6B 1.394 1.379
C5B H5B 1.102 1.079
C6B H6B 1.103 1.079
C7B O7B 1.233 1.216
C7B N 1.333 1.347
N CA 1.469 1.466
N HN 1.020 0.969
CA CB 1.539 1.529
CA C 1.531 1.506
CA HA 1.114 1.090
CB CG 1.532 1.530
CB HB1 1.115 1.090
CB HB2 1.114 1.090
CG CD 1.520 1.506
CG HG1 1.115 1.090
CG HG2 1.116 1.090
CD OE1 1.250 1.208
CD OE2 1.253 1.342
OE2 HE2 0.949 0.967
C O 1.252 1.209
C OXT 1.253 1.342
OXT HXT 0.949 0.967

Bond Angles for L24

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N2A HN21 119.0 120.0
C2 N2A HN22 108.8 120.0
N2A C2 N1 119.0 119.1
N2A C2 N3 119.4 119.1
HN21 N2A HN22 108.8 120.0
C2 N1 C6 120.0 120.6
N1 C2 N3 121.6 121.7
N1 C6 C5 120.2 119.3
N1 C6 N7 119.5 119.9
C2 N3 C4 121.3 120.9
N3 C4 O4A 121.8 120.5
N3 C4 C5 117.2 119.0
O4A C4 C5 120.9 120.5
C4 O4A HO4 121.8 106.8
C4 C5 C6 119.6 118.5
C4 C5 C10 120.8 119.7
C6 C5 C10 119.6 121.8
C5 C6 N7 120.3 120.9
C5 C10 C9 112.8 110.3
C5 C10 H101 111.0 109.3
C5 C10 H102 111.0 109.3
C6 N7 C8 125.6 119.0
C6 N7 HN7 106.5 120.5
C8 N7 HN7 106.6 120.5
N7 C8 C9 112.1 108.0
N7 C8 H81 111.2 109.7
N7 C8 H82 111.3 109.8
C9 C8 H81 111.3 109.7
C9 C8 H82 111.3 109.8
C8 C9 C10 111.2 108.9
C8 C9 C11 113.5 109.7
C8 C9 H9 105.7 109.5
H81 C8 H82 99.0 109.7
C10 C9 C11 110.4 109.6
C10 C9 H9 109.2 109.6
C9 C10 H101 111.0 109.3
C9 C10 H102 110.9 109.3
C11 C9 H9 106.6 109.6
C9 C11 C12 110.5 109.5
C9 C11 H111 111.8 109.5
C9 C11 H112 111.8 109.4
H101 C10 H102 99.4 109.2
C12 C11 H111 111.9 109.5
C12 C11 H112 111.9 109.4
C11 C12 C1B 114.4 109.5
C11 C12 H121 110.4 109.5
C11 C12 H122 110.4 109.4
H111 C11 H112 98.5 109.5
C1B C12 H121 110.4 109.5
C1B C12 H122 110.5 109.5
C12 C1B C2B 119.8 119.8
C12 C1B C6B 120.2 119.8
H121 C12 H122 99.9 109.5
C2B C1B C6B 120.0 120.4
C1B C2B C3B 120.3 120.1
C1B C2B H2B 119.4 120.0
C1B C6B C5B 119.9 120.1
C1B C6B H6B 119.8 119.9
C3B C2B H2B 120.3 119.9
C2B C3B C4B 120.1 119.9
C2B C3B H3B 120.0 120.1
C4B C3B H3B 119.9 120.0
C3B C4B C5B 119.7 119.7
C3B C4B C7B 119.2 120.1
C5B C4B C7B 120.9 120.2
C4B C5B C6B 120.0 119.9
C4B C5B H5B 119.7 120.0
C4B C7B O7B 119.7 120.0
C4B C7B N 116.6 120.0
C6B C5B H5B 120.3 120.1
C5B C6B H6B 120.3 120.0
O7B C7B N 122.4 120.0
C7B N CA 122.5 120.0
C7B N HN 113.6 120.0
CA N HN 123.8 120.0
N CA CB 110.2 109.5
N CA C 111.7 109.5
N CA HA 107.4 109.5
CB CA C 109.4 109.5
CB CA HA 109.8 109.5
CA CB CG 114.5 109.5
CA CB HB1 110.4 109.5
CA CB HB2 110.4 109.5
C CA HA 108.3 109.5
CA C O 117.8 120.0
CA C OXT 118.5 120.0
CG CB HB1 110.4 109.4
CG CB HB2 110.4 109.4
CB CG CD 112.5 109.6
CB CG HG1 111.1 109.5
CB CG HG2 111.1 109.4
HB1 CB HB2 99.9 109.5
CD CG HG1 111.1 109.4
CD CG HG2 111.1 109.5
CG CD OE1 118.3 120.0
CG CD OE2 118.9 120.1
HG1 CG HG2 99.2 109.4
OE1 CD OE2 122.8 120.0
CD OE2 HE2 118.9 120.0
O C OXT 123.7 120.0
C OXT HXT 118.4 120.0

Torsion Angles for L24

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HN21 N2A C2 HN22 125.3 179.8
N2A C2 N1 C6 179.8 179.7
N1 C2 N2A N3 180.1 179.7
N2A C2 N3 C4 180.0 180.1
C2 N2A HN21 HN22 234.7 180.2
HN21 N2A C2 N1 180.0 359.5
HN21 N2A C2 N3 359.9 179.8
C2 N2A HN22 HN21 131.1 179.8
HN22 N2A C2 N1 54.7 179.7
HN22 N2A C2 N3 234.6 360.0
N1 C2 N2A HN21 180.0 359.5
N1 C2 N2A HN22 54.7 179.7
N2A C2 N1 N3 179.9 180.3
C2 N1 C6 C5 0.5 0.4
C2 N1 C6 N7 180.7 180.1
N1 C2 N3 C4 359.9 0.4
C6 N1 C2 N3 359.9 359.5
C4 C5 C6 N1 359.4 359.9
N1 C6 C5 C10 177.0 180.1
C5 C6 N1 N7 179.7 180.3
N1 C6 N7 C8 177.4 166.6
N1 C6 N7 HN7 52.1 346.5
N3 C2 N2A HN21 359.9 179.8
N3 C2 N2A HN22 234.6 360.0
N2A C2 N3 N1 180.1 179.7
N3 C2 N1 C6 359.9 359.5
C2 N3 C4 O4A 180.1 179.9
C2 N3 C4 C5 359.9 359.9
O4A C4 N3 C5 180.2 180.0
N3 C4 O4A HO4 180.0 90.0
N3 C4 C5 C6 0.4 360.0
N3 C4 C5 C10 182.9 179.8
N3 C4 O4A C5 179.8 180.0
O4A C4 C5 C6 180.3 179.9
O4A C4 C5 C10 2.7 359.7
N1 C6 C5 C4 359.4 359.9
N3 C4 C5 O4A 180.2 180.0
C5 C4 O4A HO4 0.2 270.0
C6 C5 C4 C10 177.6 180.2
C4 C5 C6 N7 179.1 180.2
C4 C5 C10 C9 159.2 160.0
C4 C5 C10 H101 284.4 280.2
C4 C5 C10 H102 34.0 39.8
HO4 O4A C4 C5 0.2 270.0
N1 C6 C5 N7 180.3 179.7
C4 C5 C6 C10 182.4 179.8
C6 C5 C10 C9 341.6 339.8
C6 C5 C10 H101 106.8 100.0
C6 C5 C10 H102 216.4 219.6
C5 C6 N7 C8 357.7 346.3
C5 C6 N7 HN7 232.4 166.2
C4 C5 C10 C6 177.6 180.2
C10 C5 C6 N7 356.7 0.4
C8 C9 C10 C5 43.1 50.6
C5 C10 C9 C11 170.0 170.6
C5 C10 C9 H9 286.9 290.9
C9 C10 C5 H101 234.8 239.8
C9 C10 C5 H102 125.2 120.3
H101 C10 C5 H102 250.4 240.5
N1 C6 N7 C5 179.7 180.3
N7 C6 C5 C10 356.7 0.4
C8 N7 C6 HN7 125.3 180.1
C6 N7 C8 C9 29.1 44.8
C6 N7 C8 H81 154.4 285.2
C6 N7 C8 H82 263.7 164.6
C6 N7 C8 HN7 234.7 179.9
C9 C8 N7 H81 234.7 119.6
C9 C8 N7 H82 125.3 240.3
N7 C8 C9 C10 311.9 297.1
N7 C8 C9 C11 186.7 177.2
N7 C8 C9 H9 70.3 56.9
H81 C8 N7 H82 250.6 120.7
C6 N7 HN7 C8 136.2 180.1
HN7 N7 C8 C9 154.4 224.9
HN7 N7 C8 H81 279.7 105.3
HN7 N7 C8 H82 29.0 344.6
C5 C10 C9 C8 43.1 50.6
C9 C8 N7 HN7 154.4 224.9
N7 C8 C9 H81 125.3 240.4
N7 C8 C9 H82 234.7 119.7
H81 C8 C9 H82 109.4 239.3
C10 C9 C8 C11 125.2 119.9
C10 C9 C8 H9 241.7 240.2
C8 C9 C10 H101 277.8 290.4
C8 C9 C10 H102 168.3 170.9
C11 C9 C8 H9 116.5 120.3
C8 C9 C11 C12 212.2 299.4
C8 C9 C11 H111 337.5 59.5
C8 C9 C11 H112 86.9 179.5
H81 C8 N7 HN7 279.7 105.3
N7 C8 H81 C9 234.2 118.5
N7 C8 H81 H82 117.1 239.3
C9 C8 H81 H82 242.9 120.8
H81 C8 C9 C10 186.6 56.7
H81 C8 C9 C11 61.4 296.7
H81 C8 C9 H9 305.0 176.5
H82 C8 N7 HN7 29.0 344.6
N7 C8 H82 C9 125.8 241.4
N7 C8 H82 H81 242.9 120.7
C9 C8 H82 H81 117.1 239.3
H82 C8 C9 C10 77.2 177.4
H82 C8 C9 C11 312.0 57.4
H82 C8 C9 H9 195.6 297.2
C5 C10 C9 H101 125.2 120.2
C5 C10 C9 H102 234.8 239.7
C10 C9 C8 H81 186.6 56.7
C10 C9 C8 H82 77.2 177.4
C8 C9 C10 C11 233.1 240.0
C8 C9 C10 H9 116.2 119.7
C11 C9 C10 H9 243.1 239.7
C10 C9 C11 C12 86.6 179.9
C10 C9 C11 H111 211.9 300.0
C10 C9 C11 H112 321.3 60.0
H101 C10 C9 H102 109.5 119.5
C11 C9 C8 H81 61.4 296.7
C11 C9 C8 H82 312.0 57.4
C8 C9 C11 C10 125.6 119.5
C8 C9 C11 H9 244.1 239.8
C10 C9 C11 H9 118.5 120.3
C11 C9 C10 H101 44.8 50.3
C11 C9 C10 H102 295.2 290.9
C12 C11 C9 H111 234.7 239.9
C12 C11 C9 H112 125.3 120.0
C9 C11 C12 C1B 208.7 180.0
C9 C11 C12 H121 334.0 300.1
C9 C11 C12 H122 83.4 60.0
H111 C11 C9 H112 250.6 240.0
H9 C9 C8 H81 305.0 176.5
H9 C9 C8 H82 195.6 297.2
C8 C9 H9 C10 240.3 240.7
C8 C9 H9 C11 121.1 120.3
C10 C9 H9 C11 240.7 239.7
H9 C9 C10 H101 161.6 170.6
H9 C9 C10 H102 52.1 51.2
H9 C9 C11 C12 328.2 59.7
H9 C9 C11 H111 93.4 179.7
H9 C9 C11 H112 202.8 299.7
C5 C10 H101 C9 233.7 239.1
C5 C10 H101 H102 116.9 119.6
H101 C10 C9 C11 44.8 50.3
H101 C10 C9 H9 161.6 170.6
C9 C10 H101 H102 243.2 240.4
C5 C10 H102 C9 126.2 120.9
C5 C10 H102 H101 243.1 240.4
H102 C10 C9 C11 295.2 290.9
H102 C10 C9 H9 52.1 51.2
C9 C10 H102 H101 116.9 119.5
C12 C11 C9 H9 328.2 59.7
C9 C11 C12 H111 125.3 120.1
C9 C11 C12 H112 234.7 240.0
H111 C11 C12 H112 109.5 120.0
C1B C12 C11 H121 234.7 240.0
C1B C12 C11 H122 125.3 120.0
C11 C12 C1B C2B 286.4 90.1
C11 C12 C1B C6B 108.5 269.7
H121 C12 C11 H122 250.6 240.0
H111 C11 C9 H9 93.4 179.7
C9 C11 H111 C12 235.5 239.9
C9 C11 H111 H112 117.7 119.9
C12 C11 H111 H112 242.2 240.0
H111 C11 C12 C1B 83.4 60.0
H111 C11 C12 H121 208.7 180.0
H111 C11 C12 H122 318.2 300.0
H112 C11 C9 H9 202.8 299.7
C9 C11 H112 C12 124.5 120.0
C9 C11 H112 H111 242.3 240.0
C12 C11 H112 H111 117.8 120.0
H112 C11 C12 C1B 334.0 300.0
H112 C11 C12 H121 99.3 60.0
H112 C11 C12 H122 208.7 180.0
C1B C12 C11 H111 83.4 60.0
C1B C12 C11 H112 334.0 300.0
C11 C12 C1B H121 125.3 120.1
C11 C12 C1B H122 234.8 240.0
H121 C12 C1B H122 109.5 120.0
C2B C1B C12 C6B 177.9 180.4
C12 C1B C2B C3B 182.9 180.0
C12 C1B C2B H2B 2.9 359.9
C12 C1B C6B C5B 177.2 179.8
C12 C1B C6B H6B 357.1 0.3
H121 C12 C11 H111 208.7 180.0
H121 C12 C11 H112 99.3 60.0
C11 C12 H121 C1B 232.5 240.0
C11 C12 H121 H122 116.2 120.0
C1B C12 H121 H122 243.7 240.0
H121 C12 C1B C2B 161.2 330.0
H121 C12 C1B C6B 343.3 149.7
H122 C12 C11 H111 318.2 300.0
H122 C12 C11 H112 208.7 180.0
C11 C12 H122 C1B 127.5 120.0
C11 C12 H122 H121 243.8 240.0
C1B C12 H122 H121 116.3 120.0
H122 C12 C1B C2B 51.7 210.1
H122 C12 C1B C6B 233.8 29.7
C2B C1B C12 H121 161.2 330.0
C2B C1B C12 H122 51.7 210.1
C12 C1B C2B C6B 182.1 179.6
C2B C1B C6B C5B 359.2 359.4
C2B C1B C6B H6B 179.2 180.0
C3B C2B C1B H2B 180.0 180.1
C1B C2B C3B C4B 359.9 359.9
C1B C2B C3B H3B 179.9 179.9
C6B C1B C12 H121 343.3 149.7
C6B C1B C12 H122 233.8 29.7
C12 C1B C6B C2B 177.9 180.4
C6B C1B C2B C3B 0.8 0.3
C6B C1B C2B H2B 180.8 180.3
C4B C5B C6B C1B 0.1 0.6
C1B C6B C5B H5B 180.0 180.2
C5B C6B C1B H6B 180.1 179.4
C3B C2B C1B C6B 0.8 0.3
C1B C2B C3B H2B 180.0 179.9
C4B C3B C2B H3B 180.0 180.0
C2B C3B C4B C5B 359.4 0.1
C2B C3B C4B C7B 176.5 180.0
H2B C2B C1B C6B 180.8 180.3
C1B C2B H2B C3B 180.0 180.1
H2B C2B C3B C4B 179.9 180.0
H2B C2B C3B H3B 359.9 0.0
C4B C3B C2B H2B 179.9 180.0
C2B C3B C4B H3B 180.0 180.0
C5B C4B C3B C7B 182.9 180.1
C3B C4B C5B C6B 0.6 359.7
C3B C4B C5B H5B 180.7 180.0
C3B C4B C7B O7B 341.3 0.0
C3B C4B C7B N 174.4 180.0
H3B C3B C2B H2B 359.9 0.0
C2B C3B H3B C4B 180.0 180.0
H3B C3B C4B C5B 179.4 180.1
H3B C3B C4B C7B 356.4 360.0
C1B C6B C5B C4B 0.1 0.6
C5B C4B C3B H3B 179.4 180.1
C3B C4B C5B C7B 177.0 179.9
C5B C4B C7B O7B 158.3 179.9
C5B C4B C7B N 351.4 359.9
C6B C5B C4B H5B 179.9 179.6
C4B C5B C6B H6B 180.1 180.0
C7B C4B C3B H3B 356.4 360.0
C3B C4B C7B C5B 183.0 180.1
C7B C4B C5B C6B 183.6 179.8
C7B C4B C5B H5B 3.7 0.1
O7B C7B C4B N 166.9 180.1
C4B C7B N CA 174.7 180.0
C4B C7B N HN 354.7 0.1
C1B C6B C5B H6B 179.9 180.6
C6B C5B C4B C7B 183.6 179.8
C4B C5B C6B H5B 180.1 180.4
H5B C5B C4B C7B 3.7 0.1
C4B C5B H5B C6B 179.9 179.6
H5B C5B C6B H6B 0.1 359.7
C1B C6B H6B C5B 180.1 179.4
H6B C6B C5B H5B 0.1 359.7
C4B C7B O7B N 193.9 179.9
O7B C7B N CA 8.2 359.9
O7B C7B N HN 188.2 180.0
C4B C7B N O7B 166.5 180.1
CA N C7B HN 180.0 179.9
C7B N CA CB 123.5 150.1
C7B N CA C 245.4 270.1
C7B N CA HA 3.9 30.1
C7B N CA HN 180.0 180.1
CB CA N C 238.1 240.0
CB CA N HA 119.5 120.0
N CA CB CG 299.4 300.0
N CA CB HB1 64.6 60.0
N CA CB HB2 174.1 180.1
C CA N HA 241.4 240.0
N CA C O 329.1 150.0
N CA C OXT 149.1 330.0
C7B N HN CA 180.0 179.9
HN N CA CB 303.5 330.0
HN N CA C 65.4 90.0
HN N CA HA 183.9 210.0
CB CA N HN 303.5 330.0
N CA CB C 123.2 120.0
N CA CB HA 241.9 240.0
C CA CB HA 118.7 120.0
CB CA C O 91.4 270.0
CB CA C OXT 271.5 90.0
CG CB CA HB1 234.8 240.0
CG CB CA HB2 125.3 119.9
CA CB CG CD 178.7 180.0
CA CB CG HG1 304.0 300.1
CA CB CG HG2 53.5 60.0
HB1 CB CA HB2 250.5 239.9
C CA N HN 65.4 90.0
N CA C CB 237.6 240.0
N CA C HA 118.0 120.0
CB CA C HA 240.4 240.0
C CA CB CG 176.1 180.0
C CA CB HB1 301.4 300.0
C CA CB HB2 50.9 60.1
O C CA OXT 180.0 179.9
CA C OXT HXT 180.0 180.0
HA CA N HN 183.9 210.0
N CA HA CB 119.8 120.0
N CA HA C 239.2 240.0
CB CA HA C 119.4 120.0
HA CA CB CG 57.5 60.0
HA CA CB HB1 182.7 180.0
HA CA CB HB2 292.2 300.1
HA CA C O 211.0 30.0
HA CA C OXT 31.1 210.0
CG CB CA C 176.1 180.0
CG CB CA HA 57.5 60.0
CA CB CG HB1 125.2 120.0
CA CB CG HB2 234.7 240.0
HB1 CB CG HB2 109.5 120.0
CD CG CB HG1 234.7 240.0
CD CG CB HG2 125.3 120.1
CB CG CD OE1 275.3 360.0
CB CG CD OE2 95.3 180.0
HG1 CG CB HG2 250.6 240.1
HB1 CB CA C 301.4 300.0
HB1 CB CA HA 182.7 180.0
CA CB HB1 CG 232.5 240.0
CA CB HB1 HB2 116.3 120.1
CG CB HB1 HB2 243.8 240.1
HB1 CB CG CD 53.5 60.0
HB1 CB CG HG1 178.8 180.1
HB1 CB CG HG2 288.2 299.9
HB2 CB CA C 50.9 60.1
HB2 CB CA HA 292.2 300.1
CA CB HB2 CG 127.6 120.0
CA CB HB2 HB1 243.8 239.9
CG CB HB2 HB1 116.2 119.9
HB2 CB CG CD 304.0 300.1
HB2 CB CG HG1 69.3 60.1
HB2 CB CG HG2 178.8 180.0
CD CG CB HB1 53.5 60.0
CD CG CB HB2 304.0 300.1
CB CG CD HG1 125.3 120.1
CB CG CD HG2 234.7 240.0
HG1 CG CD HG2 109.4 119.9
OE1 CD CG OE2 180.0 179.9
CG CD OE2 HE2 179.9 180.0
HG1 CG CB HB1 178.8 180.1
HG1 CG CB HB2 69.3 60.1
CB CG HG1 CD 233.9 239.9
CB CG HG1 HG2 117.0 119.9
CD CG HG1 HG2 243.1 240.0
HG1 CG CD OE1 150.0 239.9
HG1 CG CD OE2 330.0 60.0
HG2 CG CB HB1 288.2 299.9
HG2 CG CB HB2 178.8 180.0
CB CG HG2 CD 126.1 120.1
CB CG HG2 HG1 243.0 240.1
CD CG HG2 HG1 116.9 119.9
HG2 CG CD OE1 40.6 120.0
HG2 CG CD OE2 220.6 300.1
OE1 CD CG HG1 150.0 239.9
OE1 CD CG HG2 40.6 120.0
CG CD OE1 OE2 180.0 180.1
OE1 CD OE2 HE2 359.9 0.1
OE2 CD CG HG1 330.0 60.0
OE2 CD CG HG2 220.6 300.1
CG CD OE2 OE1 180.0 179.9
O C CA HA 211.0 30.0
CA C O OXT 180.0 180.1
O C OXT HXT 0.0 0.1
OXT C CA HA 31.1 210.0
CA C OXT O 180.0 179.9