PDB Chemical Component KRV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KRV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N8 |
C1 |
1.531 |
1.465 |
| C2 |
C1 |
1.554 |
1.530 |
| C1 |
H1 |
1.100 |
1.090 |
| C1 |
H1A |
1.101 |
1.090 |
| C2 |
H2 |
1.100 |
1.090 |
| C2 |
H2A |
1.100 |
1.090 |
| C2 |
H2B |
1.100 |
1.091 |
| C9 |
N8 |
1.353 |
1.343 |
| N8 |
C13 |
1.422 |
1.378 |
| N10 |
C9 |
1.365 |
1.345 |
| O29 |
C9 |
1.236 |
1.216 |
| N10 |
C11 |
1.363 |
1.350 |
| N10 |
HN10 |
1.000 |
0.970 |
| O28 |
C11 |
1.238 |
1.216 |
| C11 |
C12 |
1.527 |
1.468 |
| C12 |
C25 |
1.538 |
1.507 |
| C12 |
C13 |
1.417 |
1.359 |
| C13 |
C14 |
1.516 |
1.482 |
| C14 |
O15 |
1.239 |
1.215 |
| C14 |
C16 |
1.522 |
1.476 |
| C16 |
C23 |
1.437 |
1.398 |
| C16 |
C17 |
1.430 |
1.396 |
| C17 |
C18 |
1.410 |
1.393 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
C21 |
1.457 |
1.397 |
| C18 |
C19 |
1.447 |
1.433 |
| C19 |
N20 |
1.163 |
1.136 |
| C22 |
C21 |
1.453 |
1.381 |
| C21 |
H21 |
1.080 |
1.080 |
| C23 |
C22 |
1.437 |
1.380 |
| C22 |
C24 |
1.534 |
1.507 |
| C23 |
H23 |
1.080 |
1.080 |
| C24 |
H24 |
1.100 |
1.090 |
| C24 |
H24A |
1.100 |
1.090 |
| C24 |
H24B |
1.100 |
1.090 |
| C27 |
C25 |
1.562 |
1.530 |
| C25 |
C26 |
1.556 |
1.531 |
| C25 |
H25 |
1.100 |
1.089 |
| C26 |
H26 |
1.100 |
1.090 |
| C26 |
H26A |
1.100 |
1.090 |
| C26 |
H26B |
1.100 |
1.089 |
| C27 |
H27 |
1.100 |
1.090 |
| C27 |
H27A |
1.100 |
1.090 |
| C27 |
H27B |
1.100 |
1.090 |
Bond Angles for KRV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N8 |
C1 |
H1 |
108.6 |
109.5 |
| N8 |
C1 |
H1A |
108.6 |
109.5 |
| C2 |
C1 |
H1 |
108.6 |
109.5 |
| C2 |
C1 |
H1A |
108.6 |
109.5 |
| H1 |
C1 |
H1A |
110.3 |
109.4 |
| H2 |
C2 |
H2A |
109.5 |
109.5 |
| H2 |
C2 |
H2B |
109.5 |
109.5 |
| H2A |
C2 |
H2B |
109.5 |
109.5 |
| C9 |
N8 |
C13 |
120.6 |
121.2 |
| N8 |
C13 |
C12 |
122.3 |
119.4 |
| N8 |
C13 |
C14 |
115.5 |
120.3 |
| C11 |
N10 |
HN10 |
117.9 |
119.8 |
| N10 |
C11 |
C12 |
118.4 |
118.8 |
| C11 |
C12 |
C25 |
120.4 |
120.8 |
| C11 |
C12 |
C13 |
114.3 |
118.4 |
| C13 |
C12 |
C25 |
125.3 |
120.8 |
| C12 |
C25 |
C26 |
109.6 |
109.4 |
| C12 |
C25 |
H25 |
107.7 |
109.4 |
| C12 |
C13 |
C14 |
122.3 |
120.3 |
| C13 |
C14 |
O15 |
113.9 |
120.0 |
| C13 |
C14 |
C16 |
127.4 |
120.0 |
| O15 |
C14 |
C16 |
118.7 |
120.0 |
| C14 |
C16 |
C23 |
123.8 |
120.1 |
| C14 |
C16 |
C17 |
116.6 |
120.1 |
| C17 |
C16 |
C23 |
119.5 |
119.8 |
| C16 |
C23 |
C22 |
120.5 |
120.1 |
| C16 |
C23 |
H23 |
119.7 |
119.9 |
| C16 |
C17 |
C18 |
121.4 |
119.6 |
| C16 |
C17 |
H17 |
119.3 |
120.2 |
| C18 |
C17 |
H17 |
119.3 |
120.2 |
| C17 |
C18 |
C21 |
119.7 |
119.9 |
| C17 |
C18 |
C19 |
117.5 |
120.1 |
| C19 |
C18 |
C21 |
122.8 |
120.0 |
| C18 |
C21 |
H21 |
120.2 |
119.9 |
| C18 |
C19 |
N20 |
178.3 |
180.0 |
| C22 |
C21 |
H21 |
120.2 |
119.9 |
| C23 |
C22 |
C24 |
118.8 |
119.8 |
| C22 |
C24 |
H24 |
109.5 |
109.5 |
| C22 |
C24 |
H24A |
109.5 |
109.5 |
| C22 |
C24 |
H24B |
109.5 |
109.5 |
| H24 |
C24 |
H24A |
109.4 |
109.5 |
| H24 |
C24 |
H24B |
109.4 |
109.5 |
| H24A |
C24 |
H24B |
109.5 |
109.4 |
| C27 |
C25 |
H25 |
106.6 |
109.5 |
| C26 |
C25 |
H25 |
109.7 |
109.5 |
| C25 |
C26 |
H26 |
109.5 |
109.4 |
| C25 |
C26 |
H26A |
109.5 |
109.4 |
| C25 |
C26 |
H26B |
109.5 |
109.5 |
| H26 |
C26 |
H26A |
109.4 |
109.5 |
| H26 |
C26 |
H26B |
109.5 |
109.5 |
| H26A |
C26 |
H26B |
109.5 |
109.5 |
| H27 |
C27 |
H27A |
109.5 |
109.5 |
| H27 |
C27 |
H27B |
109.5 |
109.4 |
| H27A |
C27 |
H27B |
109.5 |
109.5 |
Torsion Angles for KRV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
N8 |
H1 |
240.0 |
120.0 |
| C2 |
C1 |
N8 |
H1A |
120.0 |
240.0 |
| H1 |
C1 |
N8 |
H1A |
240.0 |
120.0 |
| N8 |
C1 |
C2 |
H1 |
120.0 |
240.0 |
| N8 |
C1 |
C2 |
H1A |
240.0 |
120.0 |
| H1 |
C1 |
C2 |
H1A |
120.0 |
240.0 |
| N8 |
C1 |
H1 |
H1A |
118.9 |
240.0 |
| C2 |
C1 |
H1 |
H1A |
241.1 |
120.0 |
| N8 |
C1 |
H1A |
H1 |
241.1 |
120.0 |
| C2 |
C1 |
H1A |
H1 |
118.9 |
240.0 |
| H2 |
C2 |
C1 |
H1 |
60.0 |
300.0 |
| H2 |
C2 |
C1 |
H1A |
300.0 |
60.0 |
| H2A |
C2 |
H2 |
H2B |
120.0 |
120.0 |
| H2A |
C2 |
C1 |
H1 |
180.0 |
60.1 |
| H2A |
C2 |
C1 |
H1A |
60.0 |
180.0 |
| H2 |
C2 |
H2A |
H2B |
240.0 |
240.0 |
| H2B |
C2 |
C1 |
H1 |
300.0 |
180.0 |
| H2B |
C2 |
C1 |
H1A |
180.0 |
300.0 |
| H2 |
C2 |
H2B |
H2A |
120.0 |
120.0 |
| C9 |
N8 |
C1 |
H1 |
202.8 |
158.8 |
| C9 |
N8 |
C1 |
H1A |
322.7 |
38.8 |
| C9 |
N8 |
C13 |
C12 |
1.1 |
359.4 |
| C9 |
N8 |
C13 |
C14 |
180.5 |
179.7 |
| C13 |
N8 |
C1 |
H1 |
23.5 |
338.5 |
| C13 |
N8 |
C1 |
H1A |
143.5 |
218.6 |
| C11 |
C12 |
C13 |
N8 |
359.4 |
0.6 |
| N8 |
C13 |
C12 |
C25 |
180.0 |
180.2 |
| C12 |
C13 |
N8 |
C14 |
180.6 |
179.7 |
| N8 |
C13 |
C14 |
O15 |
71.3 |
291.8 |
| N8 |
C13 |
C14 |
C16 |
252.6 |
111.8 |
| N10 |
C9 |
N8 |
C13 |
358.8 |
0.3 |
| N10 |
C11 |
C12 |
C25 |
179.6 |
180.0 |
| N10 |
C11 |
C12 |
C13 |
0.2 |
359.7 |
| HN10 |
N10 |
C11 |
C12 |
179.6 |
180.0 |
| O28 |
C11 |
N10 |
HN10 |
359.9 |
360.0 |
| N8 |
C13 |
C12 |
C11 |
359.4 |
0.6 |
| C12 |
C11 |
N10 |
HN10 |
179.6 |
180.0 |
| C13 |
C12 |
C11 |
C25 |
180.6 |
179.6 |
| C11 |
C12 |
C25 |
C26 |
67.4 |
302.4 |
| C11 |
C12 |
C25 |
H25 |
186.8 |
182.5 |
| C11 |
C12 |
C13 |
C14 |
180.1 |
180.3 |
| C11 |
C12 |
C25 |
C13 |
180.7 |
179.6 |
| C25 |
C12 |
C13 |
C14 |
0.7 |
359.9 |
| C27 |
C25 |
C12 |
H25 |
117.2 |
239.9 |
| C26 |
C25 |
C12 |
H25 |
240.7 |
120.0 |
| C12 |
C25 |
C26 |
H26 |
180.0 |
66.6 |
| C12 |
C25 |
C26 |
H26A |
300.0 |
186.5 |
| C12 |
C25 |
C26 |
H26B |
60.0 |
306.6 |
| N8 |
C13 |
C12 |
C14 |
179.3 |
180.3 |
| C11 |
C12 |
C13 |
C25 |
179.3 |
180.4 |
| C13 |
C12 |
C25 |
C26 |
246.8 |
122.8 |
| C13 |
C12 |
C25 |
H25 |
6.1 |
2.9 |
| C12 |
C13 |
C14 |
O15 |
250.6 |
112.1 |
| C12 |
C13 |
C14 |
C16 |
72.0 |
292.2 |
| N8 |
C13 |
C14 |
C12 |
180.6 |
179.7 |
| C14 |
C13 |
C12 |
C25 |
0.7 |
359.9 |
| O15 |
C14 |
C13 |
C16 |
178.7 |
180.0 |
| C13 |
C14 |
C16 |
C23 |
357.9 |
172.7 |
| C13 |
C14 |
C16 |
C17 |
178.3 |
353.0 |
| C13 |
C14 |
O15 |
C16 |
181.2 |
180.0 |
| O15 |
C14 |
C16 |
C23 |
179.3 |
352.7 |
| O15 |
C14 |
C16 |
C17 |
359.7 |
173.0 |
| C13 |
C14 |
C16 |
O15 |
178.6 |
180.0 |
| C17 |
C16 |
C14 |
C23 |
180.4 |
180.2 |
| C14 |
C16 |
C23 |
C22 |
179.6 |
179.7 |
| C14 |
C16 |
C23 |
H23 |
359.6 |
360.0 |
| C14 |
C16 |
C17 |
C18 |
180.9 |
180.0 |
| C14 |
C16 |
C17 |
H17 |
0.9 |
359.9 |
| C14 |
C16 |
C23 |
C17 |
180.4 |
180.2 |
| C23 |
C16 |
C17 |
C18 |
1.3 |
0.3 |
| C23 |
C16 |
C17 |
H17 |
181.3 |
180.2 |
| C16 |
C23 |
C22 |
C24 |
179.9 |
180.2 |
| C14 |
C16 |
C17 |
C23 |
179.6 |
179.8 |
| C17 |
C16 |
C23 |
C22 |
359.2 |
359.5 |
| C17 |
C16 |
C23 |
H23 |
179.2 |
179.7 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
180.1 |
| C16 |
C17 |
C18 |
C21 |
358.9 |
360.0 |
| C16 |
C17 |
C18 |
C19 |
179.0 |
180.0 |
| C18 |
C17 |
C16 |
C23 |
1.3 |
0.3 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
179.9 |
| C19 |
C18 |
C17 |
C21 |
180.1 |
180.0 |
| C17 |
C18 |
C21 |
H21 |
180.5 |
180.1 |
| C17 |
C18 |
C19 |
N20 |
1.5 |
66.2 |
| H17 |
C17 |
C16 |
C23 |
181.3 |
180.2 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
180.1 |
| H17 |
C17 |
C18 |
C21 |
178.8 |
180.1 |
| H17 |
C17 |
C18 |
C19 |
358.9 |
0.1 |
| C21 |
C18 |
C17 |
H17 |
178.8 |
180.1 |
| C17 |
C18 |
C21 |
C19 |
180.1 |
180.0 |
| C21 |
C18 |
C19 |
N20 |
181.6 |
246.3 |
| C22 |
C21 |
C18 |
H21 |
180.0 |
180.0 |
| C19 |
C18 |
C17 |
H17 |
358.9 |
0.1 |
| C17 |
C18 |
C19 |
C21 |
179.9 |
180.0 |
| C19 |
C18 |
C21 |
H21 |
0.4 |
0.0 |
| N20 |
C19 |
C18 |
C21 |
181.6 |
246.3 |
| C16 |
C23 |
C22 |
C21 |
0.3 |
0.5 |
| C18 |
C21 |
C22 |
H21 |
180.0 |
180.0 |
| C16 |
C23 |
C22 |
H23 |
180.0 |
180.3 |
| C23 |
C22 |
C21 |
H21 |
179.9 |
179.7 |
| C23 |
C22 |
C24 |
H24 |
270.2 |
270.3 |
| C23 |
C22 |
C24 |
H24A |
30.1 |
30.3 |
| C23 |
C22 |
C24 |
H24B |
150.2 |
150.3 |
| C24 |
C22 |
C21 |
H21 |
0.2 |
360.0 |
| H24 |
C24 |
C22 |
H24A |
240.0 |
240.0 |
| H24 |
C24 |
C22 |
H24B |
120.0 |
120.0 |
| H24A |
C24 |
C22 |
H24B |
240.0 |
240.0 |
| C16 |
C23 |
H23 |
C22 |
180.0 |
179.7 |
| H23 |
C23 |
C22 |
C24 |
359.9 |
360.0 |
| C22 |
C24 |
H24 |
H24A |
120.0 |
120.0 |
| C22 |
C24 |
H24 |
H24B |
240.0 |
239.9 |
| H24A |
C24 |
H24 |
H24B |
120.0 |
119.9 |
| C22 |
C24 |
H24A |
H24 |
240.0 |
240.0 |
| C22 |
C24 |
H24A |
H24B |
120.0 |
120.0 |
| H24 |
C24 |
H24A |
H24B |
240.1 |
240.0 |
| C22 |
C24 |
H24B |
H24 |
120.0 |
120.1 |
| C22 |
C24 |
H24B |
H24A |
240.0 |
240.0 |
| H24 |
C24 |
H24B |
H24A |
119.9 |
120.0 |
| C12 |
C25 |
C27 |
H25 |
242.1 |
120.0 |
| C26 |
C25 |
C27 |
H25 |
119.3 |
240.0 |
| C27 |
C25 |
C26 |
H26 |
304.6 |
306.5 |
| C27 |
C25 |
C26 |
H26A |
64.6 |
66.5 |
| C27 |
C25 |
C26 |
H26B |
184.6 |
186.5 |
| C12 |
C25 |
C26 |
H25 |
118.1 |
240.1 |
| C27 |
C25 |
C26 |
H25 |
242.7 |
120.1 |
| H26 |
C26 |
C25 |
H26A |
240.0 |
240.1 |
| H26 |
C26 |
C25 |
H26B |
120.0 |
120.0 |
| H26A |
C26 |
C25 |
H26B |
240.0 |
239.9 |
| C12 |
C25 |
H25 |
C26 |
240.8 |
119.9 |
| H25 |
C25 |
C26 |
H26 |
62.0 |
186.5 |
| H25 |
C25 |
C26 |
H26A |
181.9 |
306.4 |
| H25 |
C25 |
C26 |
H26B |
301.9 |
66.5 |
| H26 |
C26 |
C25 |
H25 |
62.0 |
186.5 |
| C25 |
C26 |
H26 |
H26A |
120.0 |
119.9 |
| C25 |
C26 |
H26 |
H26B |
240.0 |
240.0 |
| H26A |
C26 |
H26 |
H26B |
120.0 |
120.1 |
| H26A |
C26 |
C25 |
H25 |
181.9 |
306.4 |
| C25 |
C26 |
H26A |
H26 |
240.0 |
240.1 |
| C25 |
C26 |
H26A |
H26B |
120.0 |
120.0 |
| H26 |
C26 |
H26A |
H26B |
240.0 |
240.0 |
| H26B |
C26 |
C25 |
H25 |
301.9 |
66.5 |
| C25 |
C26 |
H26B |
H26 |
120.1 |
120.0 |
| C25 |
C26 |
H26B |
H26A |
240.0 |
240.0 |
| H26 |
C26 |
H26B |
H26A |
119.9 |
120.0 |
| H27 |
C27 |
C25 |
H25 |
297.8 |
303.3 |
| H27A |
C27 |
H27 |
H27B |
120.0 |
120.0 |
| H27A |
C27 |
C25 |
H25 |
57.8 |
63.3 |
| H27 |
C27 |
H27A |
H27B |
240.0 |
240.0 |
| H27B |
C27 |
C25 |
H25 |
177.9 |
183.4 |
| H27 |
C27 |
H27B |
H27A |
120.0 |
120.0 |