PDB Chemical Component KR1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KR1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C3 |
C1 |
1.460 |
1.432 |
| C1 |
N1 |
1.208 |
1.136 |
| C21 |
F1 |
1.397 |
1.351 |
| O1 |
C8 |
1.289 |
1.214 |
| C7 |
C2 |
1.425 |
1.381 |
| C3 |
C2 |
1.464 |
1.398 |
| C2 |
H2 |
1.080 |
1.080 |
| N2 |
C12 |
1.424 |
1.349 |
| N2 |
C13 |
1.397 |
1.345 |
| N2 |
HN2 |
1.000 |
0.971 |
| O2 |
C12 |
1.291 |
1.217 |
| C4 |
C3 |
1.420 |
1.394 |
| C13 |
N3 |
1.408 |
1.343 |
| N3 |
C9 |
1.466 |
1.379 |
| N3 |
C17 |
1.498 |
1.466 |
| O3 |
C13 |
1.267 |
1.215 |
| C5 |
C4 |
1.453 |
1.396 |
| C4 |
H4 |
1.080 |
1.080 |
| N4 |
C20 |
1.388 |
1.390 |
| N4 |
HN4 |
1.000 |
0.970 |
| N4 |
HN4A |
1.000 |
0.969 |
| C8 |
C5 |
1.484 |
1.477 |
| C5 |
C6 |
1.476 |
1.398 |
| C20 |
N5 |
1.356 |
1.324 |
| N5 |
C21 |
1.385 |
1.322 |
| C6 |
C7 |
1.401 |
1.381 |
| C6 |
H6 |
1.080 |
1.080 |
| C7 |
C10 |
1.566 |
1.507 |
| C9 |
C8 |
1.459 |
1.481 |
| C11 |
C9 |
1.416 |
1.360 |
| C10 |
H10 |
1.100 |
1.090 |
| C10 |
H10A |
1.099 |
1.090 |
| C10 |
H10B |
1.100 |
1.090 |
| C12 |
C11 |
1.509 |
1.467 |
| C11 |
C14 |
1.546 |
1.507 |
| C15 |
C14 |
1.592 |
1.531 |
| C14 |
C16 |
1.523 |
1.530 |
| C14 |
H14 |
1.100 |
1.090 |
| C15 |
H15 |
1.100 |
1.091 |
| C15 |
H15A |
1.100 |
1.089 |
| C15 |
H15B |
1.100 |
1.090 |
| C16 |
H16 |
1.100 |
1.091 |
| C16 |
H16A |
1.100 |
1.090 |
| C16 |
H16B |
1.101 |
1.090 |
| C18 |
C17 |
1.536 |
1.508 |
| C17 |
H17 |
1.100 |
1.089 |
| C17 |
H17A |
1.100 |
1.089 |
| C19 |
C18 |
1.496 |
1.384 |
| C18 |
C22 |
1.461 |
1.387 |
| C20 |
C19 |
1.404 |
1.390 |
| C19 |
H19 |
1.080 |
1.079 |
| C21 |
C22 |
1.389 |
1.384 |
| C22 |
H22 |
1.080 |
1.080 |
Bond Angles for KR1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C8 |
C5 |
121.3 |
120.0 |
| C7 |
C2 |
H2 |
119.4 |
119.9 |
| C3 |
C2 |
H2 |
119.4 |
119.9 |
| C12 |
N2 |
C13 |
125.9 |
120.5 |
| C12 |
N2 |
HN2 |
117.0 |
119.8 |
| N2 |
C12 |
O2 |
117.8 |
120.5 |
| N2 |
C12 |
C11 |
117.1 |
118.9 |
| C13 |
N2 |
HN2 |
117.1 |
119.7 |
| N2 |
C13 |
N3 |
118.0 |
121.7 |
| N2 |
C13 |
O3 |
122.7 |
119.1 |
| O2 |
C12 |
C11 |
125.1 |
120.6 |
| C13 |
N3 |
C17 |
113.1 |
119.4 |
| C9 |
N3 |
C17 |
127.5 |
119.4 |
| N3 |
C9 |
C8 |
111.4 |
120.3 |
| N3 |
C17 |
H17 |
108.0 |
109.4 |
| N3 |
C17 |
H17A |
108.1 |
109.5 |
| C5 |
C4 |
H4 |
121.1 |
120.2 |
| C20 |
N4 |
HN4 |
109.5 |
120.0 |
| C20 |
N4 |
HN4A |
109.5 |
120.0 |
| N4 |
C20 |
N5 |
118.9 |
119.7 |
| N4 |
C20 |
C19 |
122.4 |
119.7 |
| HN4 |
N4 |
HN4A |
109.5 |
120.0 |
| C5 |
C6 |
C7 |
120.5 |
120.1 |
| C5 |
C6 |
H6 |
119.7 |
119.9 |
| C20 |
N5 |
C21 |
125.6 |
121.6 |
| N5 |
C21 |
C22 |
120.6 |
120.8 |
| C7 |
C6 |
H6 |
119.7 |
119.9 |
| C6 |
C7 |
C10 |
119.3 |
119.8 |
| C7 |
C10 |
H10 |
109.5 |
109.5 |
| C7 |
C10 |
H10A |
109.5 |
109.5 |
| C7 |
C10 |
H10B |
109.4 |
109.5 |
| H10 |
C10 |
H10A |
109.5 |
109.4 |
| H10 |
C10 |
H10B |
109.5 |
109.5 |
| H10A |
C10 |
H10B |
109.5 |
109.5 |
| C12 |
C11 |
C14 |
118.0 |
120.8 |
| C11 |
C14 |
C16 |
110.9 |
109.5 |
| C11 |
C14 |
H14 |
107.1 |
109.5 |
| C15 |
C14 |
C16 |
110.0 |
109.5 |
| C15 |
C14 |
H14 |
108.1 |
109.4 |
| C16 |
C14 |
H14 |
108.9 |
109.5 |
| C14 |
C16 |
H16 |
109.5 |
109.5 |
| C14 |
C16 |
H16A |
109.5 |
109.5 |
| C14 |
C16 |
H16B |
109.5 |
109.5 |
| H15 |
C15 |
H15A |
109.5 |
109.5 |
| H15 |
C15 |
H15B |
109.4 |
109.4 |
| H15A |
C15 |
H15B |
109.5 |
109.5 |
| H16 |
C16 |
H16A |
109.5 |
109.5 |
| H16 |
C16 |
H16B |
109.4 |
109.4 |
| H16A |
C16 |
H16B |
109.5 |
109.5 |
| C18 |
C17 |
H17 |
108.1 |
109.5 |
| C18 |
C17 |
H17A |
108.1 |
109.5 |
| H17 |
C17 |
H17A |
110.8 |
109.5 |
| C19 |
C18 |
C22 |
120.0 |
118.6 |
| C18 |
C22 |
C21 |
117.0 |
119.3 |
| C18 |
C22 |
H22 |
121.5 |
120.4 |
| C20 |
C19 |
H19 |
121.0 |
120.5 |
| C21 |
C22 |
H22 |
121.5 |
120.3 |
Torsion Angles for KR1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N3 |
C9 |
C8 |
O1 |
72.4 |
62.3 |
| C3 |
C2 |
C7 |
H2 |
180.0 |
179.7 |
| C7 |
C2 |
C3 |
H2 |
180.0 |
180.3 |
| C13 |
N2 |
C12 |
HN2 |
180.0 |
180.2 |
| C12 |
N2 |
C13 |
N3 |
359.6 |
0.0 |
| C12 |
N2 |
C13 |
O3 |
180.2 |
179.9 |
| O2 |
C12 |
N2 |
C11 |
179.8 |
180.0 |
| N2 |
C12 |
C11 |
C14 |
180.1 |
180.1 |
| C12 |
N2 |
C13 |
HN2 |
180.0 |
179.8 |
| C13 |
N2 |
C12 |
O2 |
180.0 |
180.0 |
| C13 |
N2 |
C12 |
C11 |
0.2 |
360.0 |
| N2 |
C13 |
N3 |
C17 |
180.5 |
180.0 |
| C12 |
N2 |
HN2 |
C13 |
180.0 |
180.2 |
| HN2 |
N2 |
C12 |
O2 |
0.0 |
359.8 |
| HN2 |
N2 |
C12 |
C11 |
180.2 |
179.8 |
| HN2 |
N2 |
C13 |
N3 |
179.6 |
180.3 |
| HN2 |
N2 |
C13 |
O3 |
0.2 |
0.2 |
| O2 |
C12 |
N2 |
C13 |
180.0 |
180.0 |
| O2 |
C12 |
N2 |
HN2 |
0.0 |
359.8 |
| N2 |
C12 |
O2 |
C11 |
180.2 |
180.0 |
| O2 |
C12 |
C11 |
C14 |
0.3 |
0.1 |
| C4 |
C3 |
C2 |
H2 |
179.7 |
180.0 |
| N3 |
C13 |
N2 |
HN2 |
179.6 |
180.3 |
| N2 |
C13 |
N3 |
O3 |
180.6 |
179.9 |
| C9 |
N3 |
C13 |
C17 |
180.1 |
179.9 |
| C13 |
N3 |
C17 |
H17 |
213.5 |
35.2 |
| C13 |
N3 |
C17 |
H17A |
333.4 |
155.1 |
| N2 |
C13 |
N3 |
C9 |
0.6 |
359.9 |
| C13 |
N3 |
C9 |
C17 |
179.9 |
180.1 |
| C9 |
N3 |
C17 |
H17 |
33.4 |
215.2 |
| C9 |
N3 |
C17 |
H17A |
153.3 |
335.2 |
| C17 |
N3 |
C9 |
C8 |
359.8 |
360.0 |
| C18 |
C17 |
N3 |
H17 |
240.0 |
240.0 |
| C18 |
C17 |
N3 |
H17A |
120.0 |
120.0 |
| H17 |
C17 |
N3 |
H17A |
240.0 |
240.0 |
| O3 |
C13 |
N2 |
HN2 |
0.2 |
0.2 |
| N2 |
C13 |
O3 |
N3 |
179.4 |
180.1 |
| O3 |
C13 |
N3 |
C17 |
359.9 |
0.1 |
| O1 |
C8 |
C5 |
C4 |
359.0 |
185.4 |
| HN4 |
N4 |
C20 |
HN4A |
240.0 |
180.0 |
| N4 |
C20 |
N5 |
C21 |
180.3 |
180.0 |
| N4 |
C20 |
C19 |
H19 |
359.6 |
360.0 |
| C20 |
N4 |
HN4 |
HN4A |
120.0 |
180.0 |
| HN4 |
N4 |
C20 |
N5 |
0.0 |
0.0 |
| HN4 |
N4 |
C20 |
C19 |
180.5 |
180.0 |
| C20 |
N4 |
HN4A |
HN4 |
240.0 |
180.0 |
| HN4A |
N4 |
C20 |
N5 |
120.0 |
180.0 |
| HN4A |
N4 |
C20 |
C19 |
300.5 |
360.0 |
| N3 |
C9 |
C8 |
C5 |
251.8 |
242.3 |
| C8 |
C5 |
C4 |
H4 |
359.9 |
360.0 |
| C8 |
C5 |
C6 |
H6 |
0.5 |
360.0 |
| O1 |
C8 |
C5 |
C6 |
179.3 |
5.3 |
| C6 |
C5 |
C4 |
H4 |
179.6 |
180.0 |
| C7 |
C6 |
C5 |
H6 |
180.0 |
179.8 |
| C5 |
C6 |
C7 |
C10 |
179.4 |
180.0 |
| N5 |
C20 |
N4 |
HN4 |
0.0 |
0.0 |
| N5 |
C20 |
N4 |
HN4A |
120.0 |
180.0 |
| N4 |
C20 |
N5 |
C19 |
180.5 |
179.9 |
| C20 |
N5 |
C21 |
C22 |
0.2 |
359.9 |
| C18 |
C22 |
C21 |
N5 |
359.8 |
360.0 |
| N5 |
C21 |
C22 |
H22 |
179.8 |
180.0 |
| C6 |
C7 |
C2 |
H2 |
180.6 |
179.8 |
| C5 |
C6 |
C7 |
H6 |
180.0 |
180.2 |
| C6 |
C7 |
C10 |
H10 |
269.9 |
90.0 |
| C6 |
C7 |
C10 |
H10A |
29.9 |
209.9 |
| C6 |
C7 |
C10 |
H10B |
149.9 |
330.0 |
| C5 |
C6 |
H6 |
C7 |
180.0 |
179.8 |
| H6 |
C6 |
C7 |
C10 |
359.4 |
359.8 |
| C10 |
C7 |
C2 |
H2 |
0.4 |
0.3 |
| C10 |
C7 |
C6 |
H6 |
359.4 |
359.8 |
| H10 |
C10 |
C7 |
H10A |
240.0 |
240.1 |
| H10 |
C10 |
C7 |
H10B |
120.0 |
120.0 |
| H10A |
C10 |
C7 |
H10B |
240.0 |
240.0 |
| C8 |
C9 |
N3 |
C17 |
359.8 |
360.0 |
| N2 |
C12 |
C11 |
C9 |
359.8 |
360.0 |
| O2 |
C12 |
C11 |
C9 |
180.0 |
180.0 |
| C11 |
C9 |
N3 |
C17 |
179.5 |
180.0 |
| C7 |
C10 |
H10 |
H10A |
120.0 |
120.0 |
| C7 |
C10 |
H10 |
H10B |
240.0 |
240.0 |
| H10A |
C10 |
H10 |
H10B |
120.0 |
120.0 |
| C7 |
C10 |
H10A |
H10 |
240.0 |
240.0 |
| C7 |
C10 |
H10A |
H10B |
120.0 |
120.1 |
| H10 |
C10 |
H10A |
H10B |
240.0 |
240.0 |
| C7 |
C10 |
H10B |
H10 |
120.0 |
120.0 |
| C7 |
C10 |
H10B |
H10A |
240.0 |
239.9 |
| H10 |
C10 |
H10B |
H10A |
120.0 |
119.9 |
| C11 |
C12 |
N2 |
C13 |
0.2 |
360.0 |
| C11 |
C12 |
N2 |
HN2 |
180.2 |
179.8 |
| N2 |
C12 |
C11 |
O2 |
179.8 |
180.0 |
| C12 |
C11 |
C14 |
C16 |
64.6 |
58.4 |
| C12 |
C11 |
C14 |
H14 |
183.4 |
178.4 |
| C15 |
C14 |
C11 |
C16 |
236.9 |
240.0 |
| C15 |
C14 |
C11 |
H14 |
118.2 |
120.0 |
| C16 |
C14 |
C11 |
H14 |
241.3 |
240.0 |
| C11 |
C14 |
C16 |
H16 |
180.0 |
302.7 |
| C11 |
C14 |
C16 |
H16A |
300.0 |
62.7 |
| C11 |
C14 |
C16 |
H16B |
60.0 |
182.7 |
| C11 |
C14 |
C15 |
C16 |
123.6 |
120.0 |
| C11 |
C14 |
C15 |
H14 |
242.4 |
240.0 |
| C16 |
C14 |
C15 |
H14 |
118.8 |
120.0 |
| C15 |
C14 |
C16 |
H16 |
304.1 |
62.7 |
| C15 |
C14 |
C16 |
H16A |
64.2 |
182.7 |
| C15 |
C14 |
C16 |
H16B |
184.1 |
302.7 |
| C11 |
C14 |
C16 |
H14 |
117.6 |
120.0 |
| C15 |
C14 |
C16 |
H14 |
241.7 |
240.0 |
| H16 |
C16 |
C14 |
H16A |
240.0 |
240.0 |
| H16 |
C16 |
C14 |
H16B |
120.0 |
119.9 |
| H16A |
C16 |
C14 |
H16B |
240.0 |
240.0 |
| C11 |
C14 |
H14 |
C16 |
240.0 |
240.0 |
| C15 |
C14 |
H14 |
C16 |
119.5 |
120.0 |
| H14 |
C14 |
C16 |
H16 |
62.4 |
182.7 |
| H14 |
C14 |
C16 |
H16A |
182.4 |
302.7 |
| H14 |
C14 |
C16 |
H16B |
302.4 |
62.7 |
| H15 |
C15 |
C14 |
C16 |
56.4 |
305.2 |
| H15 |
C15 |
C14 |
H14 |
297.5 |
185.2 |
| H15A |
C15 |
H15 |
H15B |
120.0 |
120.0 |
| H15A |
C15 |
C14 |
C16 |
176.4 |
65.2 |
| H15A |
C15 |
C14 |
H14 |
57.6 |
305.2 |
| H15 |
C15 |
H15A |
H15B |
240.0 |
240.1 |
| H15B |
C15 |
C14 |
C16 |
296.4 |
185.3 |
| H15B |
C15 |
C14 |
H14 |
177.6 |
65.3 |
| H15 |
C15 |
H15B |
H15A |
120.0 |
120.0 |
| H16 |
C16 |
C14 |
H14 |
62.4 |
182.7 |
| C14 |
C16 |
H16 |
H16A |
120.0 |
120.0 |
| C14 |
C16 |
H16 |
H16B |
240.0 |
240.0 |
| H16A |
C16 |
H16 |
H16B |
120.0 |
120.0 |
| H16A |
C16 |
C14 |
H14 |
182.4 |
302.7 |
| C14 |
C16 |
H16A |
H16 |
239.9 |
240.0 |
| C14 |
C16 |
H16A |
H16B |
120.0 |
120.0 |
| H16 |
C16 |
H16A |
H16B |
240.0 |
240.0 |
| H16B |
C16 |
C14 |
H14 |
302.4 |
62.7 |
| C14 |
C16 |
H16B |
H16 |
120.0 |
120.0 |
| C14 |
C16 |
H16B |
H16A |
240.0 |
240.0 |
| H16 |
C16 |
H16B |
H16A |
120.0 |
120.0 |
| N3 |
C17 |
C18 |
H17 |
120.0 |
119.9 |
| N3 |
C17 |
C18 |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
C18 |
H17A |
120.0 |
120.1 |
| N3 |
C17 |
H17 |
H17A |
118.2 |
120.0 |
| C18 |
C17 |
H17 |
H17A |
241.7 |
239.9 |
| N3 |
C17 |
H17A |
H17 |
241.8 |
240.0 |
| C18 |
C17 |
H17A |
H17 |
118.3 |
120.1 |
| N4 |
C20 |
C19 |
C18 |
179.6 |
180.0 |
| C19 |
C18 |
C17 |
H17 |
205.8 |
147.5 |
| C19 |
C18 |
C17 |
H17A |
85.9 |
27.4 |
| C19 |
C18 |
C22 |
C21 |
0.1 |
0.1 |
| C19 |
C18 |
C22 |
H22 |
180.1 |
180.0 |
| N5 |
C21 |
C22 |
C18 |
359.8 |
360.0 |
| C22 |
C18 |
C17 |
H17 |
26.2 |
327.5 |
| C22 |
C18 |
C17 |
H17A |
266.2 |
207.5 |
| C21 |
C22 |
C18 |
H22 |
180.0 |
180.0 |
| C19 |
C20 |
N4 |
HN4 |
180.5 |
180.0 |
| C19 |
C20 |
N4 |
HN4A |
300.5 |
360.0 |
| N4 |
C20 |
C19 |
N5 |
179.5 |
180.1 |
| C19 |
C20 |
N5 |
C21 |
359.8 |
0.1 |
| C20 |
C19 |
C18 |
C22 |
360.0 |
360.0 |
| H19 |
C19 |
C18 |
C22 |
180.0 |
180.0 |
| C18 |
C22 |
C21 |
H22 |
180.0 |
180.0 |
| C18 |
C22 |
H22 |
C21 |
180.0 |
180.0 |