PDB Chemical Component KOT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KOT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C14 |
C9 |
1.391 |
1.394 |
C14 |
C13 |
1.396 |
1.381 |
C14 |
H14 |
1.080 |
1.079 |
C13 |
C12 |
1.393 |
1.382 |
C13 |
H13 |
1.080 |
1.080 |
C12 |
C11 |
1.390 |
1.383 |
C12 |
H12 |
1.080 |
1.080 |
C10 |
C11 |
1.397 |
1.380 |
C11 |
H11 |
1.080 |
1.081 |
C9 |
C10 |
1.399 |
1.393 |
C10 |
H10 |
1.080 |
1.080 |
C8 |
C9 |
1.391 |
1.484 |
C7 |
C8 |
1.328 |
1.365 |
C8 |
N3 |
1.327 |
1.345 |
N1 |
C7 |
1.329 |
1.353 |
C7 |
H7 |
1.080 |
1.080 |
N2 |
N3 |
1.238 |
1.286 |
N1 |
N2 |
1.233 |
1.287 |
C1 |
N1 |
1.465 |
1.465 |
C2 |
C1 |
1.535 |
1.531 |
C1 |
O5 |
1.439 |
1.429 |
C1 |
H1 |
1.100 |
1.089 |
C5 |
O5 |
1.442 |
1.429 |
C4 |
C5 |
1.543 |
1.531 |
C5 |
C6 |
1.526 |
1.530 |
C5 |
H5 |
1.100 |
1.090 |
O6 |
C6 |
1.425 |
1.429 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.099 |
1.090 |
O6 |
HO6 |
0.950 |
0.967 |
O4 |
C4 |
1.425 |
1.428 |
C3 |
C4 |
1.538 |
1.531 |
C4 |
H4 |
1.100 |
1.090 |
O4 |
HO4 |
0.950 |
0.967 |
O3 |
C3 |
1.424 |
1.429 |
C3 |
C2 |
1.535 |
1.531 |
C3 |
H3 |
1.099 |
1.091 |
O3 |
HO3 |
0.950 |
0.967 |
O2 |
C2 |
1.422 |
1.429 |
C2 |
H2 |
1.100 |
1.090 |
O2 |
HO2 |
0.950 |
0.967 |
Bond Angles for KOT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C14 |
C9 |
119.9 |
119.8 |
C9 |
C14 |
H14 |
120.0 |
120.1 |
C14 |
C9 |
C10 |
120.0 |
119.8 |
C13 |
C14 |
H14 |
120.1 |
120.1 |
C14 |
C13 |
C12 |
120.0 |
120.1 |
C14 |
C13 |
H13 |
120.0 |
119.9 |
C12 |
C13 |
H13 |
120.0 |
119.9 |
C13 |
C12 |
C11 |
120.4 |
120.3 |
C13 |
C12 |
H12 |
119.8 |
119.9 |
C11 |
C12 |
H12 |
119.8 |
119.9 |
C12 |
C11 |
H11 |
120.2 |
119.9 |
C10 |
C11 |
H11 |
120.2 |
119.9 |
C9 |
C10 |
H10 |
119.9 |
120.1 |
C7 |
C8 |
N3 |
106.0 |
106.2 |
N1 |
C7 |
H7 |
127.8 |
127.0 |
C2 |
C1 |
H1 |
105.4 |
109.5 |
O5 |
C1 |
H1 |
115.3 |
109.5 |
C4 |
C5 |
H5 |
105.4 |
109.5 |
C6 |
C5 |
H5 |
108.6 |
109.4 |
C5 |
C6 |
H61 |
109.8 |
109.5 |
C5 |
C6 |
H62 |
110.1 |
109.4 |
O6 |
C6 |
H61 |
109.9 |
109.5 |
O6 |
C6 |
H62 |
110.1 |
109.5 |
H61 |
C6 |
H62 |
108.6 |
109.4 |
O4 |
C4 |
H4 |
111.6 |
109.5 |
C3 |
C4 |
H4 |
109.3 |
109.5 |
O3 |
C3 |
C2 |
110.1 |
109.5 |
O3 |
C3 |
H3 |
109.2 |
109.6 |
C2 |
C3 |
H3 |
108.2 |
109.6 |
C3 |
C2 |
H2 |
109.8 |
109.5 |
O2 |
C2 |
H2 |
108.7 |
109.5 |
Torsion Angles for KOT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C13 |
C14 |
C9 |
H14 |
180.0 |
179.7 |
C9 |
C14 |
C13 |
C12 |
0.2 |
0.1 |
C9 |
C14 |
C13 |
H13 |
180.2 |
180.0 |
C14 |
C9 |
C10 |
H10 |
179.8 |
180.0 |
C9 |
C14 |
C13 |
H14 |
180.0 |
180.3 |
C13 |
C14 |
C9 |
C10 |
359.9 |
0.0 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.1 |
C14 |
C13 |
C12 |
C11 |
0.0 |
359.9 |
C14 |
C13 |
C12 |
H12 |
180.0 |
179.9 |
C13 |
C14 |
H14 |
C9 |
180.0 |
180.3 |
H14 |
C14 |
C9 |
C10 |
179.9 |
180.3 |
H14 |
C14 |
C13 |
C12 |
180.2 |
179.8 |
H14 |
C14 |
C13 |
H13 |
0.2 |
359.7 |
C12 |
C13 |
C14 |
C9 |
0.2 |
0.1 |
C12 |
C13 |
C14 |
H14 |
180.2 |
179.8 |
C14 |
C13 |
C12 |
H13 |
180.0 |
179.9 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
H11 |
179.7 |
180.0 |
H13 |
C13 |
C14 |
C9 |
180.2 |
180.0 |
H13 |
C13 |
C14 |
H14 |
0.2 |
359.7 |
C14 |
C13 |
H13 |
C12 |
180.0 |
180.1 |
H13 |
C13 |
C12 |
C11 |
180.1 |
180.0 |
H13 |
C13 |
C12 |
H12 |
0.0 |
0.0 |
C11 |
C12 |
C13 |
H13 |
180.1 |
180.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H11 |
180.0 |
180.1 |
H12 |
C12 |
C13 |
H13 |
0.0 |
0.0 |
C13 |
C12 |
H12 |
C11 |
180.0 |
180.0 |
H12 |
C12 |
C11 |
H11 |
359.7 |
360.0 |
C14 |
C9 |
C10 |
C11 |
359.8 |
360.0 |
C10 |
C11 |
C12 |
H12 |
179.7 |
180.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
179.9 |
H11 |
C11 |
C12 |
H12 |
359.7 |
360.0 |
C10 |
C9 |
C14 |
H14 |
179.9 |
180.3 |
C9 |
C10 |
C11 |
H11 |
180.4 |
180.1 |
H10 |
C10 |
C11 |
H11 |
0.4 |
360.0 |
C8 |
C9 |
C14 |
H14 |
359.9 |
0.3 |
C8 |
C9 |
C10 |
H10 |
359.8 |
0.0 |
H7 |
C7 |
C8 |
N3 |
181.3 |
180.2 |
N2 |
N1 |
C7 |
H7 |
178.5 |
179.9 |
C1 |
N1 |
C7 |
H7 |
1.1 |
360.0 |
O5 |
C1 |
C2 |
H1 |
123.3 |
120.0 |
C2 |
C1 |
O5 |
H1 |
243.0 |
240.0 |
C5 |
O5 |
C1 |
H1 |
47.0 |
58.9 |
C6 |
C5 |
C4 |
H5 |
118.5 |
120.0 |
C4 |
C5 |
C6 |
H61 |
167.7 |
305.0 |
C4 |
C5 |
C6 |
H62 |
287.3 |
64.9 |
C4 |
C5 |
C6 |
H5 |
243.4 |
240.0 |
O6 |
C6 |
C5 |
H61 |
240.0 |
240.0 |
O6 |
C6 |
C5 |
H62 |
120.5 |
120.0 |
H61 |
C6 |
C5 |
H62 |
240.4 |
240.1 |
H5 |
C5 |
C6 |
H61 |
284.4 |
65.0 |
H5 |
C5 |
C6 |
H62 |
43.9 |
185.0 |
O6 |
C6 |
C5 |
H5 |
164.4 |
305.0 |
C5 |
C6 |
O6 |
H61 |
120.0 |
120.0 |
C5 |
C6 |
O6 |
H62 |
239.5 |
240.0 |
H61 |
C6 |
O6 |
H62 |
119.6 |
120.0 |
H61 |
C6 |
C5 |
H5 |
284.4 |
65.0 |
C5 |
C6 |
H61 |
H62 |
120.5 |
119.9 |
O6 |
C6 |
H61 |
H62 |
239.5 |
240.0 |
H62 |
C6 |
C5 |
H5 |
43.9 |
185.0 |
C5 |
C6 |
H62 |
H61 |
239.7 |
240.0 |
O6 |
C6 |
H62 |
H61 |
120.3 |
120.0 |
HO6 |
O6 |
C6 |
H61 |
164.6 |
60.0 |
HO6 |
O6 |
C6 |
H62 |
45.0 |
300.0 |
O4 |
C4 |
C5 |
H5 |
310.0 |
302.4 |
C3 |
C4 |
O4 |
H4 |
120.1 |
120.2 |
C3 |
C4 |
C5 |
H5 |
68.3 |
62.4 |
O4 |
C4 |
C3 |
H4 |
238.5 |
239.8 |
H4 |
C4 |
C5 |
H5 |
188.5 |
182.3 |
HO4 |
O4 |
C4 |
H4 |
133.8 |
300.1 |
O3 |
C3 |
C4 |
H4 |
49.6 |
57.0 |
C2 |
C3 |
O3 |
H3 |
241.3 |
239.8 |
O3 |
C3 |
C2 |
H2 |
304.8 |
303.1 |
C3 |
C2 |
C1 |
H1 |
300.5 |
297.6 |
C2 |
C3 |
C4 |
H4 |
287.5 |
297.2 |
O3 |
C3 |
C2 |
H3 |
119.3 |
120.2 |
O2 |
C2 |
C3 |
H2 |
119.5 |
120.2 |
H3 |
C3 |
C4 |
H4 |
168.9 |
177.2 |
O3 |
C3 |
H3 |
C2 |
240.2 |
239.8 |
H3 |
C3 |
C2 |
H2 |
185.5 |
182.8 |
HO3 |
O3 |
C3 |
C2 |
209.6 |
299.5 |
HO3 |
O3 |
C3 |
H3 |
328.2 |
59.7 |
O2 |
C2 |
C1 |
H1 |
60.9 |
57.6 |
O2 |
C2 |
C3 |
H3 |
304.9 |
303.0 |
C3 |
C2 |
O2 |
H2 |
239.9 |
239.8 |
H2 |
C2 |
C1 |
H1 |
180.4 |
177.7 |
H2 |
C2 |
C3 |
H3 |
185.5 |
182.8 |
HO2 |
O2 |
C2 |
H2 |
256.5 |
60.2 |