PDB Chemical Component KNA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for KNA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O2 C1 1.366 1.208
C1 C2 1.518 1.507
C1 O1 1.235 1.342
O1 HO1 0.950 0.967
C3 C2 1.542 1.530
C2 H2 1.100 1.090
C2 H2A 1.100 1.090
C3 C4 1.540 1.530
C3 H3 1.100 1.090
C3 H3A 1.100 1.090
C5 C4 1.537 1.530
C4 H4 1.100 1.090
C4 H4A 1.100 1.090
C5 C6 1.538 1.530
C5 H5 1.100 1.090
C5 H5A 1.100 1.090
C6 C7 1.534 1.530
C6 H6 1.100 1.090
C6 H6A 1.100 1.090
C7 C8 1.549 1.530
C7 H7 1.100 1.090
C7 H7A 1.100 1.090
C8 C9 1.528 1.530
C8 H8 1.100 1.090
C8 H8A 1.100 1.090
C9 H9 1.100 1.090
C9 H9A 1.100 1.089
C9 H9B 1.100 1.090

Bond Angles for KNA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 119.4 120.0
C1 C2 H2 107.9 109.5
C1 C2 H2A 107.8 109.5
C1 O1 HO1 109.5 117.0
C3 C2 H2 107.8 109.5
C3 C2 H2A 107.9 109.5
H2 C2 H2A 111.0 109.4
C4 C3 H3 109.8 109.5
C4 C3 H3A 109.8 109.5
C3 C4 H4 108.6 109.5
C3 C4 H4A 108.6 109.5
H3 C3 H3A 109.1 109.5
C5 C4 H4 108.6 109.4
C5 C4 H4A 108.6 109.5
H4 C4 H4A 110.3 109.5
C6 C5 H5 109.1 109.5
C6 C5 H5A 109.2 109.5
C5 C6 C7 108.8 109.4
C5 C6 H6 109.7 109.5
C5 C6 H6A 109.7 109.5
H5 C5 H5A 109.8 109.5
C7 C6 H6 109.7 109.4
C7 C6 H6A 109.7 109.5
C6 C7 C8 113.2 109.5
C6 C7 H7 108.2 109.5
C6 C7 H7A 108.2 109.5
H6 C6 H6A 109.2 109.5
C8 C7 H7 108.2 109.4
C8 C7 H7A 108.2 109.5
C7 C8 C9 109.2 109.5
C7 C8 H8 109.5 109.5
C7 C8 H8A 109.6 109.5
H7 C7 H7A 110.7 109.4
C9 C8 H8 109.5 109.5
C9 C8 H8A 109.5 109.5
C8 C9 H9 109.5 109.4
C8 C9 H9A 109.5 109.5
C8 C9 H9B 109.5 109.4
H8 C8 H8A 109.4 109.4
H9 C9 H9A 109.5 109.5
H9 C9 H9B 109.4 109.4
H9A C9 H9B 109.5 109.5

Torsion Angles for KNA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C1 C2 H2 155.8 120.3
O2 C1 C2 H2A 275.8 240.3
O2 C1 O1 HO1 0.0 359.7
C2 C1 O1 HO1 180.5 179.9
C3 C2 C1 H2 240.0 239.9
C3 C2 C1 H2A 120.0 120.0
H2 C2 C1 H2A 240.0 240.1
O1 C1 C2 H2 335.2 300.1
O1 C1 C2 H2A 95.2 60.0
HO1 O1 C1 C2 180.5 179.9
C1 C2 C3 H2 120.0 120.1
C1 C2 C3 H2A 240.0 240.0
H2 C2 C3 H2A 120.0 119.9
C1 C2 H2 H2A 117.9 120.0
C3 C2 H2 H2A 242.0 240.1
C1 C2 H2A H2 242.1 240.0
C3 C2 H2A H2 118.0 120.0
C4 C3 C2 H2 55.6 60.0
C4 C3 C2 H2A 295.6 300.0
H3 C3 C4 H3A 120.0 120.1
C5 C4 C3 H4 240.0 240.1
C5 C4 C3 H4A 120.0 120.0
H4 C4 C3 H4A 240.0 239.9
H3 C3 C2 H2 175.6 179.9
H3 C3 C2 H2A 55.6 60.0
C4 C3 H3 H3A 239.5 239.9
H3 C3 C4 H4 204.8 180.0
H3 C3 C4 H4A 324.8 300.1
H3A C3 C2 H2 295.6 299.9
H3A C3 C2 H2A 175.6 180.0
C4 C3 H3A H3 120.5 120.0
H3A C3 C4 H4 84.8 59.9
H3A C3 C4 H4A 204.8 180.0
C5 C4 C3 H3 84.8 60.1
C5 C4 C3 H3A 324.8 300.0
C3 C4 C5 H4 120.0 120.0
C3 C4 C5 H4A 240.0 240.0
H4 C4 C5 H4A 120.0 120.0
H4 C4 C3 H3 204.8 180.0
H4 C4 C3 H3A 84.8 59.9
C3 C4 H4 H4A 118.9 120.1
C5 C4 H4 H4A 241.1 240.0
H4A C4 C3 H3 324.8 300.1
H4A C4 C3 H3A 204.8 180.0
C3 C4 H4A H4 241.1 240.0
C5 C4 H4A H4 118.9 120.0
C6 C5 C4 H4 9.1 60.0
C6 C5 C4 H4A 249.1 300.0
H5 C5 C6 H5A 120.0 120.1
C7 C6 C5 H6 240.0 240.1
C7 C6 C5 H6A 120.0 120.0
C5 C6 C7 C8 213.1 180.0
C5 C6 C7 H7 333.1 300.0
C5 C6 C7 H7A 93.1 60.0
H6 C6 C5 H6A 240.0 240.0
H5 C5 C4 H4 129.1 180.0
H5 C5 C4 H4A 9.1 60.0
C6 C5 H5 H5A 240.4 239.9
H5 C5 C6 C7 3.4 60.1
H5 C5 C6 H6 123.4 180.0
H5 C5 C6 H6A 243.4 300.0
H5A C5 C4 H4 249.1 300.0
H5A C5 C4 H4A 129.1 180.0
C6 C5 H5A H5 119.6 120.0
H5A C5 C6 C7 243.4 300.0
H5A C5 C6 H6 3.4 59.9
H5A C5 C6 H6A 123.4 180.0
C7 C6 C5 H5 3.4 60.1
C7 C6 C5 H5A 243.4 300.0
C5 C6 C7 H6 120.0 120.0
C5 C6 C7 H6A 240.0 240.0
H6 C6 C7 H6A 120.0 120.1
C8 C7 C6 H7 240.0 240.0
C8 C7 C6 H7A 120.0 120.0
C6 C7 C8 C9 155.2 180.0
C6 C7 C8 H8 275.1 300.0
C6 C7 C8 H8A 35.2 59.9
H7 C7 C6 H7A 240.0 240.0
H6 C6 C5 H5 123.4 180.0
H6 C6 C5 H5A 3.4 59.9
C5 C6 H6 C7 240.6 240.1
C5 C6 H6 H6A 120.2 120.0
C7 C6 H6 H6A 239.7 239.9
H6 C6 C7 C8 93.1 60.0
H6 C6 C7 H7 213.1 180.0
H6 C6 C7 H7A 333.1 300.0
H6A C6 C5 H5 243.4 300.0
H6A C6 C5 H5A 123.4 180.0
C5 C6 H6A C7 119.4 120.0
C5 C6 H6A H6 239.8 240.0
C7 C6 H6A H6 120.3 120.0
H6A C6 C7 C8 333.1 300.0
H6A C6 C7 H7 93.0 60.0
H6A C6 C7 H7A 213.1 180.0
C8 C7 C6 H6 93.1 60.0
C8 C7 C6 H6A 333.1 300.0
C6 C7 C8 H7 120.0 120.0
C6 C7 C8 H7A 240.0 239.9
H7 C7 C8 H7A 120.0 119.9
C9 C8 C7 H8 240.0 240.0
C9 C8 C7 H8A 120.0 120.1
C7 C8 C9 H9 180.0 300.0
C7 C8 C9 H9A 300.0 60.0
C7 C8 C9 H9B 60.0 180.0
H8 C8 C7 H8A 240.0 240.1
H7 C7 C6 H6 213.1 180.0
H7 C7 C6 H6A 93.0 60.0
C6 C7 H7 C8 237.0 240.0
C6 C7 H7 H7A 118.5 120.1
C8 C7 H7 H7A 241.5 240.1
H7 C7 C8 C9 35.2 60.0
H7 C7 C8 H8 155.2 180.0
H7 C7 C8 H8A 275.2 299.9
H7A C7 C6 H6 333.1 300.0
H7A C7 C6 H6A 213.1 180.0
C6 C7 H7A C8 123.0 120.1
C6 C7 H7A H7 241.5 239.9
C8 C7 H7A H7 118.5 119.9
H7A C7 C8 C9 275.2 300.1
H7A C7 C8 H8 35.1 60.1
H7A C7 C8 H8A 155.2 180.0
C9 C8 C7 H7 35.2 60.0
C9 C8 C7 H7A 275.2 300.1
C7 C8 C9 H8 120.0 120.0
C7 C8 C9 H8A 240.0 240.0
H8 C8 C9 H8A 120.0 120.0
H9 C9 C8 H9A 240.0 240.0
H9 C9 C8 H9B 120.0 119.9
H9A C9 C8 H9B 240.0 239.9
H8 C8 C7 H7 155.2 180.0
H8 C8 C7 H7A 35.1 60.1
C7 C8 H8 C9 240.2 240.0
C7 C8 H8 H8A 120.1 119.9
C9 C8 H8 H8A 239.9 239.9
H8 C8 C9 H9 60.0 180.0
H8 C8 C9 H9A 180.0 300.0
H8 C8 C9 H9B 300.1 60.0
H8A C8 C7 H7 275.2 299.9
H8A C8 C7 H7A 155.2 180.0
C7 C8 H8A C9 119.8 120.1
C7 C8 H8A H8 239.9 240.1
C9 C8 H8A H8 120.1 120.0
H8A C8 C9 H9 300.0 60.0
H8A C8 C9 H9A 60.0 180.0
H8A C8 C9 H9B 180.0 300.1
H9 C9 C8 H8 60.0 180.0
H9 C9 C8 H8A 300.0 60.0
C8 C9 H9 H9A 120.0 120.1
C8 C9 H9 H9B 240.0 240.1
H9A C9 H9 H9B 120.0 120.0
H9A C9 C8 H8 180.0 300.0
H9A C9 C8 H8A 60.0 180.0
C8 C9 H9A H9 239.9 240.0
C8 C9 H9A H9B 120.0 120.0
H9 C9 H9A H9B 240.1 240.0
H9B C9 C8 H8 300.1 60.0
H9B C9 C8 H8A 180.0 300.1
C8 C9 H9B H9 120.0 119.9
C8 C9 H9B H9A 240.0 239.9
H9 C9 H9B H9A 120.0 120.0