PDB Chemical Component KJR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KJR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C9 |
C10 |
1.391 |
1.382 |
| C9 |
C8 |
1.395 |
1.382 |
| C10 |
C11 |
1.394 |
1.382 |
| N3 |
C4 |
1.393 |
1.316 |
| N3 |
C2 |
1.345 |
1.331 |
| C4 |
N5 |
1.383 |
1.320 |
| C8 |
C7 |
1.406 |
1.382 |
| C31 |
C30 |
1.395 |
1.380 |
| C31 |
C26 |
1.402 |
1.397 |
| C2 |
O13 |
1.329 |
1.344 |
| C2 |
C1 |
1.346 |
1.404 |
| O13 |
C14 |
1.310 |
1.348 |
| C30 |
C29 |
1.391 |
1.384 |
| N5 |
C6 |
1.345 |
1.330 |
| C11 |
C12 |
1.395 |
1.383 |
| C1 |
C6 |
1.362 |
1.401 |
| C1 |
C15 |
1.361 |
1.468 |
| C14 |
C26 |
1.349 |
1.476 |
| C14 |
C15 |
1.346 |
1.369 |
| C6 |
N |
1.337 |
1.384 |
| C26 |
C27 |
1.403 |
1.397 |
| C7 |
C12 |
1.395 |
1.383 |
| C7 |
CA |
1.417 |
1.508 |
| C29 |
C28 |
1.391 |
1.384 |
| C15 |
C16 |
1.351 |
1.481 |
| N |
CA |
1.481 |
1.464 |
| C17 |
C16 |
1.396 |
1.396 |
| C17 |
C18 |
1.397 |
1.380 |
| C16 |
C21 |
1.403 |
1.394 |
| C27 |
C28 |
1.396 |
1.380 |
| CA |
C |
1.520 |
1.530 |
| C18 |
C19 |
1.396 |
1.381 |
| C |
O |
1.425 |
1.429 |
| C21 |
C20 |
1.399 |
1.385 |
| C19 |
C20 |
1.402 |
1.391 |
| C20 |
N22 |
1.352 |
1.400 |
| N22 |
C23 |
1.354 |
1.348 |
| C23 |
O25 |
1.231 |
1.212 |
| C23 |
C24 |
1.532 |
1.507 |
| C24 |
H1 |
1.100 |
1.091 |
| C24 |
H2 |
1.100 |
1.089 |
| C24 |
H3 |
1.100 |
1.090 |
| N22 |
H4 |
1.000 |
0.970 |
| C21 |
H5 |
1.080 |
1.080 |
| C19 |
H6 |
1.080 |
1.080 |
| C18 |
H7 |
1.080 |
1.081 |
| C17 |
H8 |
1.080 |
1.080 |
| C27 |
H9 |
1.080 |
1.080 |
| C28 |
H10 |
1.080 |
1.079 |
| C29 |
H11 |
1.080 |
1.080 |
| C30 |
H12 |
1.080 |
1.080 |
| C31 |
H13 |
1.080 |
1.080 |
| C4 |
H14 |
1.080 |
1.080 |
| N |
H15 |
1.000 |
0.970 |
| CA |
H16 |
1.100 |
1.089 |
| C |
H17 |
1.100 |
1.090 |
| C |
H18 |
1.100 |
1.090 |
| O |
H19 |
0.950 |
0.967 |
| C8 |
H20 |
1.080 |
1.080 |
| C9 |
H21 |
1.080 |
1.080 |
| C10 |
H22 |
1.080 |
1.080 |
| C11 |
H23 |
1.080 |
1.080 |
| C12 |
H24 |
1.080 |
1.080 |
Bond Angles for KJR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C9 |
C10 |
C11 |
119.7 |
120.0 |
| C10 |
C9 |
H21 |
120.1 |
120.0 |
| C9 |
C10 |
H22 |
120.2 |
120.0 |
| C9 |
C8 |
H20 |
119.6 |
120.0 |
| C10 |
C11 |
C12 |
120.5 |
120.0 |
| C11 |
C10 |
H22 |
120.2 |
120.0 |
| C10 |
C11 |
H23 |
119.7 |
120.1 |
| N3 |
C4 |
N5 |
117.8 |
122.8 |
| N3 |
C4 |
H14 |
121.1 |
118.6 |
| C4 |
N5 |
C6 |
119.7 |
120.9 |
| N5 |
C4 |
H14 |
121.1 |
118.6 |
| C8 |
C7 |
C12 |
118.6 |
120.0 |
| C31 |
C30 |
H12 |
119.9 |
119.9 |
| C2 |
C1 |
C6 |
118.1 |
118.9 |
| C30 |
C29 |
H11 |
120.2 |
119.8 |
| C1 |
C6 |
N5 |
122.3 |
118.3 |
| N5 |
C6 |
N |
118.5 |
120.8 |
| C7 |
C12 |
C11 |
120.5 |
119.9 |
| C12 |
C11 |
H23 |
119.8 |
119.9 |
| C11 |
C12 |
H24 |
119.8 |
120.1 |
| C1 |
C6 |
N |
119.1 |
120.9 |
| C14 |
C26 |
C27 |
124.0 |
120.1 |
| C6 |
N |
CA |
124.4 |
120.0 |
| C6 |
N |
H15 |
105.7 |
120.0 |
| C26 |
C27 |
C28 |
120.6 |
119.8 |
| C26 |
C27 |
H9 |
119.7 |
120.1 |
| C7 |
C12 |
H24 |
119.8 |
120.0 |
| C7 |
CA |
H16 |
110.0 |
109.5 |
| C29 |
C28 |
H10 |
119.7 |
119.9 |
| N |
CA |
C |
106.1 |
109.5 |
| CA |
N |
H15 |
105.6 |
120.1 |
| N |
CA |
H16 |
109.1 |
109.5 |
| C16 |
C17 |
H8 |
120.1 |
120.0 |
| C17 |
C18 |
H7 |
119.5 |
119.8 |
| C16 |
C21 |
H5 |
118.9 |
120.1 |
| C28 |
C27 |
H9 |
119.7 |
120.0 |
| C27 |
C28 |
H10 |
119.8 |
119.9 |
| CA |
C |
O |
104.8 |
109.5 |
| C |
CA |
H16 |
108.6 |
109.5 |
| CA |
C |
H17 |
110.6 |
109.5 |
| CA |
C |
H18 |
110.6 |
109.5 |
| C18 |
C19 |
H6 |
120.0 |
120.0 |
| O |
C |
H17 |
110.6 |
109.4 |
| O |
C |
H18 |
110.6 |
109.4 |
| C |
O |
H19 |
109.5 |
114.0 |
| C20 |
N22 |
H4 |
118.9 |
120.0 |
| C23 |
C24 |
H1 |
109.5 |
109.4 |
| C23 |
C24 |
H2 |
109.4 |
109.5 |
| C23 |
C24 |
H3 |
109.4 |
109.5 |
| H1 |
C24 |
H2 |
109.5 |
109.5 |
| H1 |
C24 |
H3 |
109.5 |
109.4 |
| H2 |
C24 |
H3 |
109.5 |
109.5 |
| H17 |
C |
H18 |
109.5 |
109.5 |
Torsion Angles for KJR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C10 |
C9 |
C8 |
H20 |
179.6 |
180.0 |
| C9 |
C10 |
C11 |
C12 |
0.0 |
0.1 |
| C11 |
C10 |
C9 |
H22 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
H23 |
180.0 |
180.0 |
| C9 |
C8 |
C7 |
C12 |
0.1 |
360.0 |
| C11 |
C10 |
C9 |
H21 |
180.4 |
180.0 |
| C9 |
C10 |
C11 |
H22 |
180.0 |
180.0 |
| C7 |
C12 |
C11 |
C10 |
359.6 |
359.9 |
| C12 |
C11 |
C10 |
H23 |
180.0 |
180.1 |
| C10 |
C11 |
C12 |
H24 |
179.7 |
180.3 |
| N3 |
C4 |
N5 |
C6 |
0.7 |
0.1 |
| N5 |
C4 |
N3 |
H14 |
180.0 |
180.1 |
| N3 |
C2 |
C1 |
C6 |
359.3 |
359.9 |
| N3 |
C4 |
N5 |
H14 |
180.0 |
179.9 |
| C1 |
C6 |
N5 |
C4 |
358.7 |
359.7 |
| C4 |
N5 |
C6 |
N |
181.7 |
180.0 |
| C8 |
C7 |
C12 |
C11 |
0.3 |
0.0 |
| C8 |
C7 |
C12 |
H24 |
180.3 |
179.7 |
| C8 |
C7 |
CA |
H16 |
137.1 |
160.3 |
| C31 |
C30 |
C29 |
H11 |
179.9 |
179.8 |
| C31 |
C26 |
C27 |
H9 |
179.2 |
180.3 |
| O13 |
C2 |
C1 |
C6 |
179.2 |
179.8 |
| C2 |
C1 |
C6 |
N5 |
1.3 |
0.3 |
| C2 |
C1 |
C6 |
N |
178.2 |
180.0 |
| C30 |
C29 |
C28 |
H10 |
179.9 |
180.1 |
| C6 |
N5 |
C4 |
H14 |
180.7 |
180.2 |
| C1 |
C6 |
N5 |
N |
176.9 |
179.7 |
| N5 |
C6 |
N |
CA |
337.4 |
359.8 |
| N5 |
C6 |
N |
H15 |
99.4 |
179.8 |
| C12 |
C11 |
C10 |
H22 |
180.0 |
180.1 |
| C10 |
C11 |
C12 |
H23 |
180.0 |
179.9 |
| C7 |
C12 |
C11 |
H24 |
180.0 |
179.7 |
| C4 |
N5 |
C6 |
C1 |
358.7 |
359.7 |
| N5 |
C6 |
C1 |
N |
183.1 |
180.3 |
| C1 |
C6 |
N |
CA |
160.3 |
180.0 |
| C1 |
C6 |
N |
H15 |
282.3 |
0.0 |
| C14 |
C26 |
C27 |
C28 |
180.5 |
179.9 |
| C14 |
C26 |
C27 |
H9 |
0.5 |
360.0 |
| C1 |
C6 |
N |
N5 |
183.0 |
180.3 |
| C6 |
N |
CA |
C |
195.1 |
274.9 |
| CA |
N |
C6 |
H15 |
238.0 |
180.0 |
| C6 |
N |
CA |
H16 |
311.9 |
35.0 |
| C28 |
C27 |
C26 |
H9 |
180.0 |
180.0 |
| C26 |
C27 |
C28 |
H10 |
180.5 |
180.0 |
| C10 |
C11 |
C12 |
C7 |
359.6 |
359.9 |
| C7 |
C12 |
C11 |
H23 |
179.6 |
180.0 |
| C11 |
C12 |
C7 |
H24 |
180.0 |
180.3 |
| C12 |
C7 |
CA |
H16 |
317.7 |
340.1 |
| C7 |
CA |
N |
H15 |
311.8 |
335.0 |
| N |
CA |
C7 |
H16 |
238.6 |
239.9 |
| C |
CA |
C7 |
H16 |
120.2 |
120.0 |
| C7 |
CA |
C |
H17 |
13.5 |
175.0 |
| C7 |
CA |
C |
H18 |
135.0 |
295.0 |
| C29 |
C28 |
C27 |
H9 |
180.5 |
180.0 |
| C27 |
C28 |
C29 |
H10 |
180.0 |
179.9 |
| C15 |
C16 |
C17 |
H8 |
359.8 |
0.3 |
| C15 |
C16 |
C21 |
H5 |
0.2 |
359.7 |
| C6 |
N |
CA |
H15 |
122.0 |
180.0 |
| C7 |
CA |
N |
H16 |
122.0 |
120.0 |
| N |
CA |
C |
O |
132.4 |
295.0 |
| C |
CA |
N |
H16 |
243.2 |
240.0 |
| N |
CA |
C |
H17 |
251.7 |
55.0 |
| N |
CA |
C |
H18 |
13.2 |
175.1 |
| C16 |
C17 |
C18 |
H7 |
180.3 |
180.3 |
| C17 |
C16 |
C21 |
H5 |
179.7 |
180.0 |
| C17 |
C18 |
C19 |
H6 |
178.8 |
180.0 |
| C26 |
C27 |
C28 |
H9 |
180.0 |
180.0 |
| C29 |
C28 |
C27 |
H10 |
180.0 |
180.1 |
| C7 |
CA |
C |
H16 |
238.9 |
240.0 |
| C |
CA |
N |
H15 |
73.0 |
95.0 |
| N |
CA |
C |
H16 |
117.2 |
120.1 |
| O |
C |
CA |
H17 |
240.7 |
240.0 |
| O |
C |
CA |
H18 |
119.3 |
120.0 |
| CA |
C |
O |
H19 |
180.0 |
180.0 |
| H17 |
C |
CA |
H18 |
238.5 |
240.0 |
| O |
C |
CA |
H16 |
15.3 |
175.0 |
| CA |
C |
O |
H17 |
119.2 |
120.0 |
| CA |
C |
O |
H18 |
240.8 |
240.0 |
| H17 |
C |
O |
H18 |
121.5 |
120.0 |
| C21 |
C20 |
N22 |
H4 |
35.2 |
215.5 |
| C19 |
C20 |
N22 |
H4 |
217.8 |
35.2 |
| N22 |
C23 |
C24 |
H1 |
180.2 |
269.9 |
| N22 |
C23 |
C24 |
H2 |
300.2 |
29.9 |
| N22 |
C23 |
C24 |
H3 |
60.2 |
150.0 |
| O25 |
C23 |
C24 |
H1 |
360.0 |
90.0 |
| O25 |
C23 |
C24 |
H2 |
120.0 |
210.0 |
| O25 |
C23 |
C24 |
H3 |
240.0 |
330.0 |
| H1 |
C24 |
C23 |
H2 |
240.0 |
240.0 |
| H1 |
C24 |
C23 |
H3 |
120.0 |
119.9 |
| H2 |
C24 |
C23 |
H3 |
240.0 |
239.9 |
| C23 |
C24 |
H1 |
H2 |
120.0 |
120.0 |
| C23 |
C24 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C24 |
H1 |
H3 |
120.0 |
120.0 |
| C23 |
C24 |
H2 |
H1 |
240.0 |
240.0 |
| C23 |
C24 |
H2 |
H3 |
119.9 |
120.0 |
| H1 |
C24 |
H2 |
H3 |
240.0 |
240.0 |
| C23 |
C24 |
H3 |
H1 |
120.0 |
119.9 |
| C23 |
C24 |
H3 |
H2 |
240.1 |
240.0 |
| H1 |
C24 |
H3 |
H2 |
120.0 |
120.0 |
| H7 |
C18 |
C19 |
H6 |
358.8 |
360.0 |
| H8 |
C17 |
C18 |
H7 |
0.3 |
0.1 |
| C26 |
C27 |
H9 |
C28 |
180.0 |
180.0 |
| H9 |
C27 |
C28 |
H10 |
0.5 |
359.9 |
| H10 |
C28 |
C27 |
H9 |
0.5 |
359.9 |
| H11 |
C29 |
C28 |
H10 |
359.9 |
0.0 |
| H12 |
C30 |
C29 |
H11 |
360.0 |
360.0 |
| H13 |
C31 |
C30 |
H12 |
359.8 |
359.8 |
| N3 |
C4 |
H14 |
N5 |
180.0 |
180.1 |
| H14 |
C4 |
N5 |
C6 |
180.7 |
180.2 |
| C6 |
N |
H15 |
CA |
226.6 |
180.0 |
| H15 |
N |
CA |
C |
73.0 |
95.0 |
| H15 |
N |
CA |
H16 |
189.9 |
215.0 |
| N |
CA |
H16 |
C |
244.8 |
240.0 |
| H16 |
CA |
N |
H15 |
189.9 |
215.0 |
| H16 |
CA |
C |
O |
15.3 |
175.0 |
| H16 |
CA |
C |
H17 |
134.5 |
294.9 |
| H16 |
CA |
C |
H18 |
256.0 |
55.0 |
| CA |
C |
H17 |
O |
244.3 |
240.0 |
| H17 |
C |
CA |
H16 |
134.5 |
294.9 |
| CA |
C |
H17 |
H18 |
122.1 |
120.0 |
| O |
C |
H17 |
H18 |
237.8 |
240.0 |
| H17 |
C |
O |
H19 |
60.7 |
60.0 |
| CA |
C |
H18 |
O |
115.7 |
120.0 |
| H18 |
C |
CA |
H16 |
256.0 |
55.0 |
| CA |
C |
H18 |
H17 |
237.9 |
240.0 |
| O |
C |
H18 |
H17 |
122.2 |
119.9 |
| H18 |
C |
O |
H19 |
299.2 |
300.0 |
| H19 |
O |
C |
H17 |
60.7 |
60.0 |
| H19 |
O |
C |
H18 |
299.2 |
300.0 |
| H20 |
C8 |
C7 |
C12 |
180.1 |
180.0 |
| H21 |
C9 |
C10 |
C11 |
180.4 |
180.0 |
| H21 |
C9 |
C10 |
H22 |
0.3 |
0.0 |
| H21 |
C9 |
C8 |
H20 |
359.6 |
359.9 |
| C9 |
C10 |
H22 |
C11 |
180.0 |
180.0 |
| H22 |
C10 |
C9 |
H21 |
0.3 |
0.0 |
| H22 |
C10 |
C11 |
C12 |
180.0 |
180.1 |
| H22 |
C10 |
C11 |
H23 |
0.1 |
0.0 |
| C10 |
C11 |
H23 |
C12 |
180.0 |
180.1 |
| H23 |
C11 |
C10 |
H22 |
0.1 |
0.0 |
| H23 |
C11 |
C12 |
H24 |
359.6 |
0.3 |
| C7 |
C12 |
H24 |
C11 |
180.0 |
180.3 |
| H24 |
C12 |
C11 |
H23 |
359.6 |
0.3 |