PDB Chemical Component KET
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KET
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.349 |
1.317 |
N1 |
C6 |
1.338 |
1.319 |
N1 |
HN1 |
1.020 |
0.970 |
C2 |
C2A |
1.508 |
1.507 |
C2 |
C3 |
1.410 |
1.388 |
C2A |
H2A1 |
1.115 |
1.090 |
C2A |
H2A2 |
1.115 |
1.089 |
C2A |
H2A3 |
1.115 |
1.090 |
C3 |
O3 |
1.352 |
1.357 |
C3 |
C4 |
1.383 |
1.404 |
O3 |
HO3 |
0.950 |
0.968 |
C4 |
C4A |
1.442 |
1.476 |
C4 |
C5 |
1.422 |
1.400 |
C4A |
N |
1.281 |
1.294 |
C4A |
H4A |
1.103 |
1.081 |
C5 |
C6 |
1.363 |
1.380 |
C5 |
C5A |
1.557 |
1.507 |
C6 |
H6 |
1.104 |
1.079 |
C5A |
OP4 |
1.423 |
1.429 |
C5A |
H5A1 |
1.115 |
1.090 |
C5A |
H5A2 |
1.115 |
1.089 |
OP4 |
P |
1.594 |
1.610 |
P |
OP1 |
1.478 |
1.609 |
P |
OP2 |
1.558 |
1.610 |
P |
OP3 |
1.461 |
1.481 |
OP2 |
HOP2 |
0.951 |
0.967 |
OP3 |
HOP3 |
0.951 |
|
N |
CA |
1.329 |
1.465 |
CA |
CB |
1.541 |
1.530 |
CA |
C |
1.556 |
1.507 |
CA |
HA |
1.115 |
1.090 |
CB |
CG |
1.502 |
1.507 |
CB |
HB1 |
1.115 |
1.090 |
CB |
HB2 |
1.116 |
1.090 |
CG |
OD1 |
1.216 |
1.342 |
CG |
OD2 |
1.311 |
1.209 |
OD2 |
HD2 |
0.949 |
|
C |
O |
1.217 |
1.342 |
C |
OXT |
1.314 |
1.208 |
OXT |
HXT |
0.950 |
|
Bond Angles for KET
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
123.8 |
122.2 |
C2 |
N1 |
HN1 |
118.6 |
118.9 |
N1 |
C2 |
C2A |
118.7 |
119.6 |
N1 |
C2 |
C3 |
117.5 |
120.8 |
C6 |
N1 |
HN1 |
117.6 |
118.9 |
N1 |
C6 |
C5 |
119.4 |
121.0 |
N1 |
C6 |
H6 |
119.4 |
119.5 |
C2A |
C2 |
C3 |
123.7 |
119.6 |
C2 |
C2A |
H2A1 |
118.7 |
109.5 |
C2 |
C2A |
H2A2 |
108.8 |
109.5 |
C2 |
C2A |
H2A3 |
108.9 |
109.4 |
C2 |
C3 |
O3 |
115.8 |
120.6 |
C2 |
C3 |
C4 |
121.4 |
118.8 |
H2A1 |
C2A |
H2A2 |
108.9 |
109.5 |
H2A1 |
C2A |
H2A3 |
108.9 |
109.4 |
H2A2 |
C2A |
H2A3 |
101.2 |
109.5 |
O3 |
C3 |
C4 |
122.8 |
120.6 |
C3 |
O3 |
HO3 |
115.8 |
106.8 |
C3 |
C4 |
C4A |
120.0 |
121.0 |
C3 |
C4 |
C5 |
116.8 |
118.1 |
C4A |
C4 |
C5 |
123.2 |
120.9 |
C4 |
C4A |
N |
116.0 |
120.0 |
C4 |
C4A |
H4A |
127.4 |
120.0 |
C4 |
C5 |
C6 |
121.1 |
119.1 |
C4 |
C5 |
C5A |
120.5 |
120.5 |
N |
C4A |
H4A |
116.6 |
120.0 |
C4A |
N |
CA |
125.1 |
120.0 |
C6 |
C5 |
C5A |
117.9 |
120.5 |
C5 |
C6 |
H6 |
121.2 |
119.5 |
C5 |
C5A |
OP4 |
113.2 |
109.4 |
C5 |
C5A |
H5A1 |
110.9 |
109.4 |
C5 |
C5A |
H5A2 |
110.9 |
109.5 |
OP4 |
C5A |
H5A1 |
110.8 |
109.4 |
OP4 |
C5A |
H5A2 |
110.8 |
109.5 |
C5A |
OP4 |
P |
120.6 |
106.8 |
H5A1 |
C5A |
H5A2 |
99.4 |
109.5 |
OP4 |
P |
OP1 |
108.7 |
109.5 |
OP4 |
P |
OP2 |
107.3 |
109.5 |
OP4 |
P |
OP3 |
103.3 |
109.5 |
OP1 |
P |
OP2 |
109.0 |
109.5 |
OP1 |
P |
OP3 |
116.9 |
109.5 |
OP2 |
P |
OP3 |
111.1 |
109.4 |
P |
OP2 |
HOP2 |
107.3 |
106.7 |
P |
OP3 |
HOP3 |
103.3 |
|
N |
CA |
CB |
124.2 |
109.5 |
N |
CA |
C |
122.8 |
109.5 |
N |
CA |
HA |
18.1 |
109.5 |
CB |
CA |
C |
113.0 |
109.4 |
CB |
CA |
HA |
116.0 |
109.5 |
CA |
CB |
CG |
112.6 |
109.5 |
CA |
CB |
HB1 |
111.1 |
109.5 |
CA |
CB |
HB2 |
111.1 |
109.5 |
C |
CA |
HA |
128.3 |
109.5 |
CA |
C |
O |
121.8 |
120.0 |
CA |
C |
OXT |
115.3 |
120.0 |
CG |
CB |
HB1 |
111.1 |
109.5 |
CG |
CB |
HB2 |
111.1 |
109.4 |
CB |
CG |
OD1 |
122.6 |
120.0 |
CB |
CG |
OD2 |
113.5 |
120.0 |
HB1 |
CB |
HB2 |
99.3 |
109.5 |
OD1 |
CG |
OD2 |
123.9 |
120.0 |
CG |
OD2 |
HD2 |
113.5 |
|
O |
C |
OXT |
122.9 |
120.0 |
C |
OXT |
HXT |
115.4 |
|
Torsion Angles for KET
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
C2 |
N1 |
C6 |
C5 |
1.9 |
0.1 |
C2 |
N1 |
C6 |
H6 |
181.9 |
180.1 |
C2A |
C2 |
N1 |
C3 |
181.0 |
179.8 |
N1 |
C2 |
C2A |
H2A1 |
180.0 |
89.9 |
N1 |
C2 |
C2A |
H2A2 |
305.3 |
210.0 |
N1 |
C2 |
C2A |
H2A3 |
54.7 |
330.0 |
N1 |
C2 |
C3 |
O3 |
181.2 |
180.0 |
N1 |
C2 |
C3 |
C4 |
359.7 |
359.5 |
C2 |
N1 |
C6 |
HN1 |
180.0 |
180.0 |
C6 |
N1 |
C2 |
C2A |
180.8 |
180.0 |
C6 |
N1 |
C2 |
C3 |
359.8 |
0.2 |
C4 |
C5 |
C6 |
N1 |
356.8 |
360.0 |
N1 |
C6 |
C5 |
C5A |
184.6 |
180.0 |
C5 |
C6 |
N1 |
H6 |
180.0 |
180.0 |
C2 |
N1 |
HN1 |
C6 |
180.0 |
180.0 |
HN1 |
N1 |
C2 |
C2A |
0.8 |
0.0 |
HN1 |
N1 |
C2 |
C3 |
179.8 |
180.3 |
HN1 |
N1 |
C6 |
C5 |
182.0 |
180.0 |
HN1 |
N1 |
C6 |
H6 |
2.0 |
0.0 |
C2A |
C2 |
N1 |
C6 |
180.8 |
180.0 |
C2A |
C2 |
N1 |
HN1 |
0.8 |
0.0 |
N1 |
C2 |
C2A |
C3 |
178.9 |
180.2 |
C2A |
C2 |
C3 |
O3 |
0.1 |
0.2 |
C2A |
C2 |
C3 |
C4 |
178.6 |
179.7 |
H2A1 |
C2A |
C2 |
H2A2 |
234.7 |
239.9 |
H2A1 |
C2A |
C2 |
H2A3 |
125.2 |
119.9 |
H2A2 |
C2A |
C2 |
H2A3 |
250.5 |
240.0 |
C3 |
C2 |
N1 |
C6 |
359.8 |
0.2 |
C3 |
C2 |
N1 |
HN1 |
179.8 |
180.3 |
N1 |
C2 |
C3 |
C2A |
181.1 |
179.8 |
C3 |
C2 |
C2A |
H2A1 |
1.1 |
269.7 |
C3 |
C2 |
C2A |
H2A2 |
126.4 |
29.8 |
C3 |
C2 |
C2A |
H2A3 |
235.8 |
149.8 |
O3 |
C3 |
C2 |
C4 |
181.5 |
180.5 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
269.5 |
C2 |
C3 |
C4 |
C4A |
180.2 |
180.2 |
C2 |
C3 |
C4 |
C5 |
359.1 |
0.5 |
H2A1 |
C2A |
C2 |
C3 |
1.1 |
269.7 |
C2 |
C2A |
H2A1 |
H2A2 |
125.2 |
120.0 |
C2 |
C2A |
H2A1 |
H2A3 |
234.8 |
240.1 |
H2A2 |
C2A |
H2A1 |
H2A3 |
109.5 |
120.0 |
H2A2 |
C2A |
C2 |
C3 |
126.4 |
29.8 |
C2 |
C2A |
H2A2 |
H2A1 |
229.2 |
240.0 |
C2 |
C2A |
H2A2 |
H2A3 |
114.6 |
120.0 |
H2A1 |
C2A |
H2A2 |
H2A3 |
245.4 |
240.0 |
H2A3 |
C2A |
C2 |
C3 |
235.8 |
149.8 |
C2 |
C2A |
H2A3 |
H2A1 |
130.8 |
120.0 |
C2 |
C2A |
H2A3 |
H2A2 |
245.4 |
240.0 |
H2A1 |
C2A |
H2A3 |
H2A2 |
114.7 |
120.1 |
C2 |
C3 |
O3 |
C4 |
178.5 |
179.4 |
O3 |
C3 |
C4 |
C4A |
358.7 |
359.7 |
O3 |
C3 |
C4 |
C5 |
177.5 |
180.0 |
C2 |
C3 |
C4 |
O3 |
181.6 |
180.5 |
C4 |
C3 |
O3 |
HO3 |
1.4 |
90.1 |
C4A |
C4 |
C3 |
C5 |
181.1 |
179.7 |
C3 |
C4 |
C4A |
N |
333.6 |
0.3 |
C3 |
C4 |
C4A |
H4A |
153.6 |
180.3 |
C3 |
C4 |
C5 |
C6 |
2.7 |
359.7 |
C3 |
C4 |
C5 |
C5A |
174.7 |
179.7 |
HO3 |
O3 |
C3 |
C4 |
1.4 |
90.1 |
C3 |
C4 |
C4A |
C5 |
178.8 |
180.3 |
C4A |
C4 |
C5 |
C6 |
181.5 |
180.0 |
C4A |
C4 |
C5 |
C5A |
353.5 |
360.0 |
N |
C4A |
C4 |
H4A |
180.0 |
180.0 |
C4 |
C4A |
N |
CA |
213.3 |
180.0 |
N1 |
C6 |
C5 |
C4 |
356.8 |
360.0 |
C3 |
C4 |
C5 |
C4A |
181.2 |
179.7 |
C5 |
C4 |
C4A |
N |
154.8 |
180.0 |
C5 |
C4 |
C4A |
H4A |
334.8 |
360.0 |
C6 |
C5 |
C4 |
C5A |
187.9 |
180.0 |
C4 |
C5 |
C6 |
H6 |
176.8 |
180.0 |
C4 |
C5 |
C5A |
OP4 |
67.3 |
180.0 |
C4 |
C5 |
C5A |
H5A1 |
192.6 |
300.0 |
C4 |
C5 |
C5A |
H5A2 |
302.1 |
60.0 |
N |
C4A |
C4 |
C5 |
154.8 |
180.0 |
C4 |
C4A |
N |
H4A |
180.0 |
180.0 |
C4A |
N |
CA |
CB |
359.9 |
120.1 |
C4A |
N |
CA |
C |
177.8 |
240.0 |
C4A |
N |
CA |
HA |
291.5 |
0.0 |
H4A |
C4A |
C4 |
C5 |
334.8 |
360.0 |
C4 |
C4A |
H4A |
N |
180.0 |
180.0 |
H4A |
C4A |
N |
CA |
33.3 |
360.0 |
C5 |
C6 |
N1 |
HN1 |
182.0 |
180.0 |
N1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C5A |
172.3 |
180.0 |
C6 |
C5 |
C5A |
OP4 |
239.6 |
0.0 |
C6 |
C5 |
C5A |
H5A1 |
4.9 |
119.9 |
C6 |
C5 |
C5A |
H5A2 |
114.4 |
240.0 |
C4 |
C5 |
C5A |
C6 |
187.7 |
180.0 |
C5A |
C5 |
C6 |
H6 |
4.6 |
0.0 |
OP4 |
C5A |
C5 |
H5A1 |
234.7 |
240.1 |
OP4 |
C5A |
C5 |
H5A2 |
125.2 |
120.0 |
C5 |
C5A |
OP4 |
P |
166.5 |
180.0 |
H5A1 |
C5A |
C5 |
H5A2 |
250.5 |
239.9 |
H6 |
C6 |
N1 |
HN1 |
2.0 |
0.0 |
N1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
C5A |
4.6 |
0.0 |
C5 |
C5A |
OP4 |
H5A1 |
125.3 |
119.9 |
C5 |
C5A |
OP4 |
H5A2 |
234.7 |
240.0 |
H5A1 |
C5A |
OP4 |
H5A2 |
109.4 |
120.1 |
C5A |
OP4 |
P |
OP1 |
235.5 |
175.0 |
C5A |
OP4 |
P |
OP2 |
117.8 |
295.0 |
C5A |
OP4 |
P |
OP3 |
0.3 |
55.0 |
C5 |
C5A |
H5A1 |
OP4 |
233.4 |
240.1 |
C5 |
C5A |
H5A1 |
H5A2 |
116.8 |
120.0 |
OP4 |
C5A |
H5A1 |
H5A2 |
243.4 |
239.9 |
H5A1 |
C5A |
OP4 |
P |
41.2 |
60.1 |
C5 |
C5A |
H5A2 |
OP4 |
126.6 |
120.0 |
C5 |
C5A |
H5A2 |
H5A1 |
243.2 |
240.0 |
OP4 |
C5A |
H5A2 |
H5A1 |
116.7 |
120.0 |
H5A2 |
C5A |
OP4 |
P |
291.8 |
300.0 |
P |
OP4 |
C5A |
H5A1 |
41.2 |
60.1 |
P |
OP4 |
C5A |
H5A2 |
291.8 |
300.0 |
OP1 |
P |
OP4 |
OP2 |
117.7 |
240.0 |
OP1 |
P |
OP4 |
OP3 |
235.2 |
120.0 |
OP2 |
P |
OP4 |
OP3 |
117.5 |
240.1 |
OP4 |
P |
OP2 |
HOP2 |
180.0 |
300.0 |
OP4 |
P |
OP3 |
HOP3 |
180.0 |
|
OP4 |
P |
OP1 |
OP2 |
243.4 |
120.0 |
OP4 |
P |
OP1 |
OP3 |
116.4 |
240.0 |
OP2 |
P |
OP1 |
OP3 |
233.0 |
120.0 |
OP1 |
P |
OP2 |
HOP2 |
62.4 |
60.0 |
OP1 |
P |
OP3 |
HOP3 |
299.3 |
|
OP4 |
P |
OP2 |
OP1 |
117.5 |
239.9 |
OP4 |
P |
OP2 |
OP3 |
247.8 |
120.0 |
OP1 |
P |
OP2 |
OP3 |
130.2 |
240.0 |
OP2 |
P |
OP3 |
HOP3 |
65.3 |
|
OP4 |
P |
OP3 |
OP1 |
240.7 |
120.1 |
OP4 |
P |
OP3 |
OP2 |
114.7 |
240.0 |
OP1 |
P |
OP3 |
OP2 |
234.1 |
120.0 |
OP3 |
P |
OP2 |
HOP2 |
292.2 |
180.0 |
HOP2 |
OP2 |
P |
OP3 |
292.2 |
180.0 |
CA |
N |
C4A |
H4A |
33.3 |
360.0 |
CB |
CA |
N |
C |
182.1 |
240.0 |
CB |
CA |
N |
HA |
68.4 |
120.0 |
N |
CA |
CB |
CG |
97.3 |
295.0 |
N |
CA |
CB |
HB1 |
222.5 |
55.0 |
N |
CA |
CB |
HB2 |
332.0 |
175.0 |
C |
CA |
N |
HA |
246.2 |
240.0 |
N |
CA |
C |
O |
326.2 |
180.0 |
N |
CA |
C |
OXT |
148.0 |
0.1 |
N |
CA |
CB |
C |
178.1 |
120.0 |
N |
CA |
CB |
HA |
341.3 |
240.0 |
C |
CA |
CB |
HA |
163.2 |
120.0 |
CB |
CA |
C |
O |
144.3 |
300.0 |
CB |
CA |
C |
OXT |
326.0 |
120.0 |
CG |
CB |
CA |
HB1 |
234.7 |
240.0 |
CG |
CB |
CA |
HB2 |
125.3 |
120.0 |
CA |
CB |
CG |
OD1 |
38.0 |
180.0 |
CA |
CB |
CG |
OD2 |
216.5 |
0.0 |
HB1 |
CB |
CA |
HB2 |
250.5 |
240.0 |
N |
CA |
C |
CB |
181.9 |
240.0 |
N |
CA |
C |
HA |
21.2 |
120.1 |
CB |
CA |
C |
HA |
199.3 |
240.0 |
C |
CA |
CB |
CG |
279.2 |
175.0 |
C |
CA |
CB |
HB1 |
44.5 |
295.0 |
C |
CA |
CB |
HB2 |
153.9 |
55.0 |
O |
C |
CA |
OXT |
178.2 |
179.9 |
CA |
C |
OXT |
HXT |
180.0 |
|
N |
CA |
HA |
CB |
121.1 |
120.0 |
N |
CA |
HA |
C |
281.3 |
240.0 |
CB |
CA |
HA |
C |
160.2 |
120.0 |
HA |
CA |
CB |
CG |
116.0 |
55.0 |
HA |
CA |
CB |
HB1 |
241.3 |
175.0 |
HA |
CA |
CB |
HB2 |
350.7 |
295.0 |
HA |
CA |
C |
O |
304.9 |
60.0 |
HA |
CA |
C |
OXT |
126.7 |
240.0 |
CG |
CB |
CA |
C |
279.2 |
175.0 |
CG |
CB |
CA |
HA |
116.0 |
55.0 |
CA |
CB |
CG |
HB1 |
125.3 |
120.0 |
CA |
CB |
CG |
HB2 |
234.7 |
240.0 |
HB1 |
CB |
CG |
HB2 |
109.5 |
120.0 |
OD1 |
CG |
CB |
OD2 |
181.5 |
179.9 |
CB |
CG |
OD2 |
HD2 |
180.0 |
|
HB1 |
CB |
CA |
C |
44.5 |
295.0 |
HB1 |
CB |
CA |
HA |
241.3 |
175.0 |
CA |
CB |
HB1 |
CG |
233.9 |
240.0 |
CA |
CB |
HB1 |
HB2 |
116.9 |
120.0 |
CG |
CB |
HB1 |
HB2 |
243.0 |
240.0 |
HB1 |
CB |
CG |
OD1 |
272.7 |
59.9 |
HB1 |
CB |
CG |
OD2 |
91.2 |
240.0 |
HB2 |
CB |
CA |
C |
153.9 |
55.0 |
HB2 |
CB |
CA |
HA |
350.7 |
295.0 |
CA |
CB |
HB2 |
CG |
126.1 |
120.0 |
CA |
CB |
HB2 |
HB1 |
243.0 |
240.0 |
CG |
CB |
HB2 |
HB1 |
116.9 |
120.0 |
HB2 |
CB |
CG |
OD1 |
163.2 |
299.9 |
HB2 |
CB |
CG |
OD2 |
341.7 |
120.0 |
OD1 |
CG |
CB |
HB1 |
272.7 |
59.9 |
OD1 |
CG |
CB |
HB2 |
163.2 |
299.9 |
CB |
CG |
OD1 |
OD2 |
178.4 |
180.1 |
OD1 |
CG |
OD2 |
HD2 |
358.5 |
|
OD2 |
CG |
CB |
HB1 |
91.2 |
240.0 |
OD2 |
CG |
CB |
HB2 |
341.7 |
120.0 |
CB |
CG |
OD2 |
OD1 |
181.5 |
179.9 |
O |
C |
CA |
HA |
304.9 |
60.0 |
CA |
C |
O |
OXT |
181.9 |
180.1 |
O |
C |
OXT |
HXT |
1.8 |
|
OXT |
C |
CA |
HA |
126.7 |
240.0 |
CA |
C |
OXT |
O |
178.2 |
179.9 |