PDB Chemical Component KEF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for KEF

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C14 O15 1.443 1.347
C14 C19 1.368 1.364
C14 C13 1.493 1.473
O15 C16 1.370 1.342
C16 C17 1.398 1.349
C16 H16 1.103 1.080
C17 C19 1.332 1.407
C17 H17 1.104 1.080
C19 H19 1.103 1.079
C18 O17 1.423 1.429
C18 H183 1.115 1.090
C18 H182 1.114 1.090
C18 H181 1.115 1.090
O17 N16 1.476 1.416
N16 C13 1.263 1.304
C4' C4 1.532 1.506
C4' O4A 1.250 1.343
C4' O4B 1.235 1.208
C3' C3 1.523 1.508
C3' O3' 1.451 1.452
C3' H3'2 1.115 1.090
C3' H3'1 1.116 1.090
C11 C13 1.507 1.483
C11 N10 1.358 1.348
C11 O12 1.228 1.215
C2 C3 1.568 1.291
C2 S1 1.831 1.758
C2 H2 1.103 1.080
C3 C4 1.360 1.500
C4 N5 1.424 1.471
C4 H4 1.115 1.091
C6 C7 1.630 1.532
C6 N5 1.506 1.498
C6 S1 1.790 1.820
C6 H6 1.116 1.090
C7 C8 1.567 1.517
C7 N10 1.434 1.465
C7 H7 1.115 1.090
C8 N5 1.348 1.348
C8 O9 1.208 1.213
N10 H10 1.019 0.970
O4A H4O 0.949 0.967
O3' C31 1.406 1.346
C31 O31 1.171 1.215
C31 N31 1.527 1.348
N31 HN31 1.019 0.970
N31 HN32 1.020 0.971

Bond Angles for KEF

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O15 C14 C19 106.4 108.1
O15 C14 C13 128.8 126.0
C14 O15 C16 99.1 109.4
C19 C14 C13 124.8 125.9
C14 C19 C17 117.4 106.7
C14 C19 H19 122.5 126.6
C14 C13 N16 118.3 120.0
C14 C13 C11 118.0 120.0
O15 C16 C17 120.0 108.7
O15 C16 H16 119.1 125.6
C17 C16 H16 121.0 125.6
C16 C17 C19 97.1 107.1
C16 C17 H17 133.0 126.5
C19 C17 H17 129.9 126.4
C17 C19 H19 120.0 126.7
O17 C18 H183 107.5 109.5
O17 C18 H182 112.9 109.5
O17 C18 H181 112.9 109.5
C18 O17 N16 107.6 106.8
H183 C18 H182 113.0 109.5
H183 C18 H181 112.9 109.4
H182 C18 H181 97.6 109.5
O17 N16 C13 116.2 120.0
N16 C13 C11 123.6 120.0
C4 C4' O4A 120.0 120.0
C4 C4' O4B 118.9 120.0
C4' C4 C3 126.4 109.7
C4' C4 N5 114.6 109.2
C4' C4 H4 85.3 109.7
O4A C4' O4B 121.1 120.0
C4' O4A H4O 120.0 120.0
C3 C3' O3' 103.3 109.4
C3 C3' H3'2 114.6 109.4
C3 C3' H3'1 114.6 109.4
C3' C3 C2 111.6 115.7
C3' C3 C4 125.3 115.7
O3' C3' H3'2 114.6 109.5
O3' C3' H3'1 114.6 109.5
C3' O3' C31 118.3 120.0
H3'2 C3' H3'1 95.8 109.6
C13 C11 N10 115.4 120.0
C13 C11 O12 120.8 120.0
N10 C11 O12 123.9 120.0
C11 N10 C7 122.6 120.0
C11 N10 H10 115.9 120.0
C3 C2 S1 116.3 126.9
C3 C2 H2 114.8 116.6
C2 C3 C4 123.0 128.6
S1 C2 H2 129.0 116.5
C2 S1 C6 91.5 99.6
C3 C4 N5 119.0 108.9
C3 C4 H4 44.8 109.6
N5 C4 H4 154.3 109.8
C4 N5 C6 123.2 126.5
C4 N5 C8 138.1 138.2
C7 C6 N5 84.8 85.5
C7 C6 S1 121.1 113.8
C7 C6 H6 118.0 115.6
C6 C7 C8 84.3 87.3
C6 C7 N10 115.5 113.6
C6 C7 H7 122.1 113.6
N5 C6 S1 109.0 108.1
N5 C6 H6 128.7 115.9
C6 N5 C8 97.4 95.2
S1 C6 H6 97.5 114.5
C8 C7 N10 112.4 113.6
C8 C7 H7 124.9 113.6
C7 C8 N5 92.8 91.6
C7 C8 O9 133.0 134.3
N10 C7 H7 98.7 112.8
C7 N10 H10 121.5 120.0
N5 C8 O9 134.2 134.1
O3' C31 O31 119.9 120.0
O3' C31 N31 110.3 120.0
O31 C31 N31 129.4 120.0
C31 N31 HN31 129.4 120.0
C31 N31 HN32 110.2 120.0
HN31 N31 HN32 120.0 120.0

Torsion Angles for KEF

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C19 C14 O15 C13 180.0 180.3
O15 C14 C19 C17 0.2 359.6
O15 C14 C19 H19 180.1 179.9
O15 C14 C13 N16 91.5 180.0
O15 C14 C13 C11 271.9 0.1
C14 O15 C16 C17 0.0 0.0
C14 O15 C16 H16 180.0 180.0
O15 C14 C19 C13 180.0 179.7
C19 C14 O15 C16 359.9 0.2
C19 C14 C13 N16 271.5 359.7
C19 C14 C13 C11 92.0 179.7
C16 C17 C19 C14 359.9 0.4
C14 C19 C17 H17 179.8 180.1
C17 C19 C14 H19 180.0 179.7
O15 C14 C13 C19 180.0 180.3
C13 C14 O15 C16 179.9 180.0
C13 C14 C19 C17 180.1 179.9
C13 C14 C19 H19 0.1 0.2
O17 N16 C13 C14 149.9 174.9
N16 C13 C14 C11 179.6 179.9
C14 C13 C11 N10 98.5 5.6
C14 C13 C11 O12 278.2 185.6
C16 O15 C14 C19 359.9 0.2
C16 O15 C14 C13 179.9 180.0
C17 C16 O15 H16 180.0 180.1
O15 C16 C17 C19 0.0 359.7
O15 C16 C17 H17 180.1 180.0
C14 C19 C17 C16 359.9 0.4
O15 C16 C17 H16 180.0 179.9
C19 C17 C16 H17 179.9 179.7
C16 C17 C19 H19 179.9 180.1
O15 C16 H16 C17 180.0 180.1
H16 C16 C17 C19 180.0 179.8
H16 C16 C17 H17 0.1 0.1
C17 C19 C14 C13 180.1 179.9
C14 C19 C17 H19 180.0 180.3
C19 C17 C16 H16 180.0 179.8
C16 C17 C19 H17 180.1 180.3
H17 C17 C16 H16 0.1 0.1
C16 C17 H17 C19 179.9 179.6
H17 C17 C19 H19 359.8 359.8
H19 C19 C14 C13 0.1 0.2
C14 C19 H19 C17 180.0 179.6
H19 C19 C17 H17 359.8 359.8
H183 C18 O17 H182 234.7 120.0
H183 C18 O17 H181 125.2 240.0
H182 C18 O17 H181 250.5 120.1
C18 O17 N16 C13 169.5 180.0
O17 C18 H183 H182 125.2 240.0
O17 C18 H183 H181 234.8 120.0
H183 C18 O17 N16 180.0 300.0
H182 C18 H183 H181 109.6 240.0
O17 C18 H182 H183 237.7 120.0
O17 C18 H182 H181 118.8 240.0
H182 C18 O17 N16 305.3 180.0
H183 C18 H182 H181 241.1 120.0
O17 C18 H181 H183 122.3 240.0
O17 C18 H181 H182 241.2 120.0
H181 C18 O17 N16 54.8 60.0
H183 C18 H181 H182 118.9 240.0
C14 C13 N16 O17 149.9 174.9
N16 O17 C18 H183 180.0 300.0
N16 O17 C18 H182 305.3 180.0
N16 O17 C18 H181 54.8 60.0
O17 N16 C13 C11 329.4 354.9
C14 C13 N16 C11 180.5 180.1
N16 C13 C11 N10 279.0 185.6
N16 C13 C11 O12 98.7 5.6
O4A C4' C4 O4B 179.9 180.0
C4 C4' O4A H4O 179.9 180.1
C3' C3 C4 C4' 6.7 295.6
C2 C3 C4 C4' 183.9 115.6
C3 C4 C4' N5 182.3 240.7
C3 C4 C4' H4 19.2 120.4
N5 C4 C4' H4 196.9 239.7
C4' C4 N5 C6 194.8 277.1
C4' C4 N5 C8 30.8 102.0
C4 C4' O4A O4B 180.1 180.0
O4A C4' C4 C3 237.4 60.0
O4A C4' C4 N5 55.1 179.3
O4A C4' C4 H4 218.2 299.6
C4 C4' O4B O4A 179.9 180.0
O4B C4' C4 C3 57.5 240.0
O4B C4' C4 N5 235.2 359.3
O4B C4' C4 H4 38.3 119.6
O4B C4' O4A H4O 359.8 0.0
C4' C4 C3 C3' 6.7 295.6
O3' C3' C3 H3'2 234.7 120.0
O3' C3' C3 H3'1 125.3 240.0
C3 C3' O3' C31 172.2 180.0
H3'2 C3' C3 H3'1 250.6 120.1
C3' C3 C2 S1 196.9 181.1
C3' C3 C2 H2 16.9 1.1
C2 C3 C3' C4 182.6 180.0
C3' C3 C4 N5 189.1 176.2
C3' C3 C4 H4 34.5 56.1
C3 C3' O3' H3'2 125.3 240.1
C3 C3' O3' H3'1 234.7 119.9
O3' C3' C3 C2 79.0 360.0
O3' C3' C3 C4 256.4 180.0
H3'2 C3' O3' H3'1 109.4 239.9
C3' O3' C31 O31 7.8 360.0
C3' O3' C31 N31 181.7 180.0
C3 C3' H3'2 O3' 240.9 119.9
C3 C3' H3'2 H3'1 120.4 240.0
H3'2 C3' C3 C2 204.4 240.0
H3'2 C3' C3 C4 21.8 60.0
O3' C3' H3'2 H3'1 239.5 120.0
H3'2 C3' O3' C31 46.9 300.0
C3 C3' H3'1 O3' 119.1 240.1
C3 C3' H3'1 H3'2 239.6 120.0
H3'1 C3' C3 C2 313.7 119.9
H3'1 C3' C3 C4 131.1 300.0
O3' C3' H3'1 H3'2 120.5 240.0
H3'1 C3' O3' C31 297.5 60.1
C14 C13 C11 N16 179.5 179.9
N10 C11 C13 O12 180.3 180.0
C13 C11 N10 C7 179.4 185.3
C13 C11 N10 H10 359.4 5.4
C13 C11 N10 O12 179.7 180.0
C6 C7 N10 C11 100.9 156.5
C8 C7 N10 C11 195.4 254.2
C11 N10 C7 H7 328.9 25.4
C7 N10 C11 H10 180.0 180.0
C13 C11 O12 N10 180.3 180.0
O12 C11 N10 C7 359.7 5.4
O12 C11 N10 H10 179.7 185.4
C4' C4 C3 C2 183.9 115.6
C2 C3 C3' O3' 79.0 360.0
C2 C3 C3' H3'2 204.4 240.0
C2 C3 C3' H3'1 313.7 119.9
C3' C3 C2 C4 177.5 180.0
S1 C2 C3 H2 180.0 179.9
C3 C2 S1 C6 310.4 340.4
C2 C3 C4 N5 6.2 356.2
C2 C3 C4 H4 211.6 236.1
C3 C2 S1 H2 180.0 180.1
S1 C2 C3 C4 19.4 1.1
C7 C6 S1 C2 158.8 133.1
N5 C6 S1 C2 63.4 40.0
C2 S1 C6 H6 288.0 269.2
C3 C2 H2 S1 180.0 179.9
H2 C2 C3 C4 199.4 181.1
H2 C2 S1 C6 130.4 160.4
C3 C4 C4' O4A 237.4 60.0
C3 C4 C4' O4B 57.5 240.0
C4' C4 C3 N5 177.6 119.4
C4' C4 C3 H4 332.2 239.5
C4 C3 C3' O3' 256.4 180.0
C4 C3 C3' H3'2 21.8 60.0
C4 C3 C3' H3'1 131.1 300.0
C3' C3 C4 C2 182.9 180.0
C4 C3 C2 S1 19.4 1.1
C4 C3 C2 H2 199.4 181.1
N5 C4 C3 H4 154.6 120.1
C3 C4 N5 C6 12.7 36.9
C3 C4 N5 C8 208.7 221.7
N5 C4 C4' O4A 55.1 179.3
N5 C4 C4' O4B 235.2 359.3
C4' C4 N5 C3 182.1 240.3
C4' C4 N5 H4 137.9 120.2
C3 C4 N5 H4 315.8 240.0
C7 C6 N5 C4 183.9 188.7
C4 N5 C6 S1 305.0 302.3
C4 N5 C6 H6 61.8 72.4
C6 N5 C4 C8 164.0 175.1
C7 C8 N5 C4 173.6 170.6
C4 N5 C8 O9 356.8 352.2
H4 C4 C4' O4A 218.2 299.6
H4 C4 C4' O4B 38.3 119.6
C4' C4 H4 C3 157.9 120.5
C4' C4 H4 N5 217.7 240.1
C3 C4 H4 N5 59.8 119.6
H4 C4 N5 C6 56.9 156.9
H4 C4 N5 C8 252.9 341.8
C11 N10 C7 C6 100.9 156.5
C2 S1 C6 C7 158.8 133.1
C4 N5 C6 C7 183.9 188.7
N5 C6 C7 S1 109.0 107.8
N5 C6 C7 H6 228.5 243.3
C7 C6 N5 C8 353.2 5.4
S1 C6 C7 H6 119.5 135.5
C8 C7 C6 N10 247.9 245.4
C8 C7 C6 H7 128.1 114.6
C6 C7 C8 N5 353.5 5.3
C6 C7 C8 O9 170.4 183.7
N10 C7 C6 H7 240.2 229.3
C6 C7 N10 H10 280.9 336.5
C2 S1 C6 N5 63.4 40.0
C6 N5 C4 H4 56.9 156.9
C4 N5 C6 C8 190.7 183.3
C7 C6 N5 S1 238.9 246.4
C7 C6 N5 H6 122.1 116.3
N5 C6 C7 C8 5.8 355.2
N5 C6 C7 N10 118.0 109.8
N5 C6 C7 H7 237.7 240.6
S1 C6 N5 H6 243.1 229.9
C7 C8 N5 C6 7.1 354.5
C6 N5 C8 O9 190.2 176.1
C6 S1 C2 H2 130.4 160.4
C7 C6 S1 N5 95.4 93.1
C7 C6 S1 H6 230.8 224.0
S1 C6 C7 C8 256.8 247.4
S1 C6 C7 N10 8.9 2.0
S1 C6 C7 H7 128.7 132.7
N5 C6 S1 H6 135.4 130.9
S1 C6 N5 C8 114.3 119.0
C7 C6 H6 N5 252.9 262.2
C7 C6 H6 S1 131.2 135.2
H6 C6 C7 C8 137.3 111.9
H6 C6 C7 N10 249.4 226.5
H6 C6 C7 H7 9.2 357.2
N5 C6 H6 S1 238.3 233.1
H6 C6 N5 C8 231.1 249.1
C11 N10 C7 C8 195.4 254.2
C4 N5 C8 C7 173.6 170.6
C8 C7 C6 N5 5.8 355.2
C8 C7 C6 S1 256.8 247.4
C8 C7 C6 H6 137.3 111.9
C6 C7 C8 N10 115.3 114.6
C6 C7 C8 H7 234.4 245.4
C6 N5 C8 C7 7.1 354.5
N10 C7 C8 H7 119.1 130.8
C8 C7 N10 H10 15.4 74.2
N5 C8 C7 O9 183.1 181.6
C7 N10 C11 O12 359.7 5.4
C11 N10 C7 H10 180.0 180.0
N10 C7 C6 N5 118.0 109.8
N10 C7 C6 S1 8.9 2.0
N10 C7 C6 H6 249.4 226.5
C6 C7 N10 C8 265.5 262.3
C6 C7 N10 H7 132.0 131.1
C8 C7 N10 H7 226.5 228.8
N10 C7 C8 N5 238.2 250.7
N10 C7 C8 O9 55.1 69.1
H7 C7 C6 N5 237.7 240.6
H7 C7 C6 S1 128.7 132.7
H7 C7 C6 H6 9.2 357.2
C6 C7 H7 C8 107.2 97.7
C6 C7 H7 N10 232.4 228.9
C8 C7 H7 N10 125.2 131.2
H7 C7 C8 N5 119.1 119.9
H7 C7 C8 O9 296.0 298.3
H7 C7 N10 H10 148.9 205.3
C8 N5 C4 H4 252.9 341.8
C4 N5 C8 C6 166.5 176.1
C8 N5 C6 S1 114.3 119.0
C8 N5 C6 H6 231.1 249.1
N5 C8 C7 N10 238.2 250.7
N5 C8 C7 H7 119.1 119.9
C7 C8 N5 O9 176.8 178.4
O9 C8 C7 N10 55.1 69.1
O9 C8 C7 H7 296.0 298.3
C7 C8 O9 N5 184.4 182.2
H10 N10 C11 O12 179.7 185.4
C11 N10 H10 C7 180.0 180.0
H10 N10 C7 H7 148.9 205.3
H4O O4A C4' O4B 359.8 0.0
C31 O3' C3' H3'2 46.9 300.0
C31 O3' C3' H3'1 297.5 60.1
O31 C31 O3' N31 186.1 180.0
O3' C31 N31 HN31 6.8 359.9
O3' C31 N31 HN32 180.0 180.0
O3' C31 O31 N31 172.6 180.0
O31 C31 N31 HN31 179.9 180.0
O31 C31 N31 HN32 353.2 0.0
O3' C31 N31 O31 186.8 180.0
HN31 N31 C31 HN32 186.8 179.9
C31 N31 HN31 HN32 172.7 180.1
C31 N31 HN32 HN31 186.0 179.9