PDB Chemical Component KBE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KBE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C |
O |
1.270 |
1.209 |
C |
CA |
1.511 |
1.506 |
C |
OXT |
1.430 |
1.342 |
N |
CB |
1.478 |
1.469 |
N |
H |
1.000 |
1.009 |
N |
H2 |
1.000 |
1.009 |
CA |
CB |
1.531 |
1.530 |
CA |
HB |
1.100 |
1.091 |
CA |
HAA |
1.099 |
1.090 |
CB |
CG |
1.529 |
1.530 |
CB |
HA |
1.100 |
1.090 |
CD |
CE |
1.534 |
1.530 |
CD |
CG |
1.526 |
1.529 |
CD |
HD |
1.099 |
1.090 |
CD |
HDA |
1.100 |
1.090 |
CE |
NZ |
1.468 |
1.469 |
CE |
HE |
1.100 |
1.090 |
CE |
HEA |
1.100 |
1.090 |
CG |
HG |
1.100 |
1.090 |
CG |
HGA |
1.100 |
1.090 |
NZ |
HNZ |
1.000 |
1.010 |
NZ |
HNZA |
1.000 |
1.008 |
OXT |
HXT |
0.951 |
0.967 |
Bond Angles for KBE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C |
CA |
122.0 |
120.0 |
O |
C |
OXT |
119.0 |
120.0 |
CA |
C |
OXT |
119.0 |
120.0 |
C |
CA |
CB |
116.3 |
109.5 |
C |
CA |
HB |
107.2 |
109.4 |
C |
CA |
HAA |
107.2 |
109.5 |
C |
OXT |
HXT |
109.5 |
117.0 |
CB |
N |
H |
109.5 |
111.0 |
CB |
N |
H2 |
109.5 |
111.0 |
N |
CB |
CA |
108.8 |
109.5 |
N |
CB |
CG |
109.2 |
109.5 |
N |
CB |
HA |
110.5 |
109.5 |
H |
N |
H2 |
109.4 |
111.0 |
CB |
CA |
HB |
107.3 |
109.5 |
CB |
CA |
HAA |
107.2 |
109.5 |
CA |
CB |
CG |
110.7 |
109.5 |
CA |
CB |
HA |
109.1 |
109.4 |
HB |
CA |
HAA |
111.6 |
109.4 |
CG |
CB |
HA |
108.6 |
109.5 |
CB |
CG |
CD |
109.4 |
109.5 |
CB |
CG |
HG |
109.5 |
109.4 |
CB |
CG |
HGA |
109.5 |
109.4 |
CE |
CD |
CG |
110.8 |
109.5 |
CE |
CD |
HD |
109.0 |
109.5 |
CE |
CD |
HDA |
109.0 |
109.4 |
CD |
CE |
NZ |
110.2 |
109.5 |
CD |
CE |
HE |
109.2 |
109.5 |
CD |
CE |
HEA |
109.2 |
109.5 |
CG |
CD |
HD |
109.0 |
109.5 |
CG |
CD |
HDA |
109.0 |
109.5 |
CD |
CG |
HG |
109.5 |
109.5 |
CD |
CG |
HGA |
109.5 |
109.5 |
HD |
CD |
HDA |
109.9 |
109.4 |
NZ |
CE |
HE |
109.2 |
109.5 |
NZ |
CE |
HEA |
109.3 |
109.4 |
CE |
NZ |
HNZ |
109.5 |
111.0 |
CE |
NZ |
HNZA |
109.5 |
111.0 |
HE |
CE |
HEA |
109.7 |
109.4 |
HG |
CG |
HGA |
109.4 |
109.5 |
HNZ |
NZ |
HNZA |
109.4 |
111.0 |
Torsion Angles for KBE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
C |
O |
OXT |
180.0 |
180.3 |
O |
C |
CA |
CB |
13.8 |
0.0 |
O |
C |
CA |
HB |
133.8 |
120.0 |
O |
C |
CA |
HAA |
253.8 |
240.0 |
O |
C |
OXT |
HXT |
360.0 |
0.1 |
O |
C |
CA |
OXT |
180.0 |
179.7 |
CA |
C |
OXT |
HXT |
180.0 |
179.8 |
N |
CB |
CA |
C |
312.2 |
65.0 |
CB |
CA |
C |
HB |
240.0 |
240.0 |
CB |
CA |
C |
HAA |
120.0 |
120.1 |
C |
CA |
CB |
CG |
72.2 |
185.0 |
C |
CA |
CB |
HA |
191.6 |
305.0 |
HB |
CA |
C |
HAA |
240.0 |
240.0 |
O |
C |
OXT |
CA |
180.0 |
180.3 |
OXT |
C |
CA |
CB |
193.8 |
180.3 |
OXT |
C |
CA |
HB |
313.8 |
300.3 |
OXT |
C |
CA |
HAA |
73.8 |
60.2 |
C |
CA |
CB |
N |
312.2 |
65.0 |
H |
N |
CB |
H2 |
240.0 |
236.1 |
N |
CB |
CA |
HB |
192.2 |
305.0 |
N |
CB |
CA |
HAA |
72.2 |
185.0 |
CA |
CB |
N |
CG |
120.9 |
120.0 |
CA |
CB |
N |
HA |
240.3 |
240.0 |
CG |
CB |
N |
HA |
119.4 |
120.0 |
N |
CB |
CG |
CD |
289.0 |
295.0 |
N |
CB |
CG |
HG |
49.0 |
55.0 |
N |
CB |
CG |
HGA |
169.0 |
175.0 |
CB |
N |
H |
H2 |
120.0 |
123.9 |
H |
N |
CB |
CA |
180.0 |
296.1 |
H |
N |
CB |
CG |
59.1 |
176.0 |
H |
N |
CB |
HA |
299.7 |
56.1 |
CB |
N |
H2 |
H |
240.0 |
236.1 |
H2 |
N |
CB |
CA |
300.0 |
60.0 |
H2 |
N |
CB |
CG |
179.1 |
300.0 |
H2 |
N |
CB |
HA |
59.7 |
180.0 |
CB |
CA |
C |
OXT |
193.8 |
180.3 |
C |
CA |
CB |
HB |
120.0 |
120.0 |
C |
CA |
CB |
HAA |
240.0 |
239.9 |
CA |
CB |
N |
H |
180.0 |
296.1 |
CA |
CB |
N |
H2 |
300.0 |
60.0 |
N |
CB |
CA |
CG |
240.0 |
240.0 |
N |
CB |
CA |
HA |
120.6 |
120.0 |
HB |
CA |
CB |
HAA |
120.0 |
119.9 |
CG |
CB |
CA |
HA |
240.6 |
240.0 |
CA |
CB |
CG |
CD |
169.3 |
175.0 |
CA |
CB |
CG |
HG |
289.3 |
295.0 |
CA |
CB |
CG |
HGA |
49.3 |
55.0 |
HB |
CA |
C |
OXT |
313.8 |
300.3 |
C |
CA |
HB |
CB |
234.3 |
240.0 |
C |
CA |
HB |
HAA |
117.2 |
120.0 |
CB |
CA |
HB |
HAA |
242.8 |
240.0 |
HB |
CA |
CB |
CG |
312.2 |
65.0 |
HB |
CA |
CB |
HA |
71.6 |
185.0 |
HAA |
CA |
C |
OXT |
73.8 |
60.2 |
C |
CA |
HAA |
CB |
125.6 |
120.1 |
C |
CA |
HAA |
HB |
242.8 |
240.0 |
CB |
CA |
HAA |
HB |
117.2 |
120.0 |
HAA |
CA |
CB |
CG |
192.2 |
305.1 |
HAA |
CA |
CB |
HA |
311.6 |
65.0 |
CG |
CB |
N |
H |
59.1 |
176.0 |
CG |
CB |
N |
H2 |
179.1 |
300.0 |
N |
CB |
CG |
CA |
119.7 |
120.0 |
N |
CB |
CG |
HA |
239.4 |
240.0 |
CG |
CB |
CA |
HB |
312.2 |
65.0 |
CG |
CB |
CA |
HAA |
192.2 |
305.1 |
CA |
CB |
CG |
HA |
119.7 |
120.0 |
CE |
CD |
CG |
CB |
186.1 |
180.0 |
CB |
CG |
CD |
HD |
66.1 |
60.0 |
CB |
CG |
CD |
HDA |
306.1 |
300.0 |
CD |
CG |
CB |
HG |
240.0 |
240.0 |
CD |
CG |
CB |
HGA |
120.0 |
120.0 |
HG |
CG |
CB |
HGA |
240.0 |
240.1 |
HA |
CB |
N |
H |
299.7 |
56.1 |
HA |
CB |
N |
H2 |
59.7 |
180.0 |
N |
CB |
HA |
CA |
240.5 |
240.0 |
N |
CB |
HA |
CG |
119.8 |
120.0 |
HA |
CB |
CA |
HB |
71.6 |
185.0 |
HA |
CB |
CA |
HAA |
311.6 |
65.0 |
CA |
CB |
HA |
CG |
239.3 |
240.0 |
HA |
CB |
CG |
CD |
49.6 |
55.0 |
HA |
CB |
CG |
HG |
169.6 |
175.1 |
HA |
CB |
CG |
HGA |
289.6 |
295.0 |
CB |
CG |
CD |
CE |
186.1 |
180.0 |
CG |
CD |
CE |
HD |
240.0 |
239.9 |
CG |
CD |
CE |
HDA |
120.0 |
120.0 |
CE |
CD |
CG |
HG |
66.1 |
60.0 |
CE |
CD |
CG |
HGA |
306.1 |
300.0 |
HD |
CD |
CE |
HDA |
240.0 |
240.1 |
NZ |
CE |
CD |
HE |
240.0 |
240.0 |
NZ |
CE |
CD |
HEA |
120.0 |
120.0 |
CD |
CE |
NZ |
HNZ |
180.0 |
56.1 |
CD |
CE |
NZ |
HNZA |
300.0 |
180.0 |
HE |
CE |
CD |
HEA |
240.0 |
240.0 |
CD |
CG |
CB |
HA |
49.6 |
55.0 |
CB |
CG |
CD |
HG |
120.0 |
120.0 |
CB |
CG |
CD |
HGA |
240.0 |
240.0 |
CE |
CD |
CG |
HD |
120.0 |
120.0 |
CE |
CD |
CG |
HDA |
240.0 |
240.0 |
CG |
CD |
CE |
NZ |
173.5 |
180.0 |
CG |
CD |
CE |
HE |
293.5 |
300.0 |
CG |
CD |
CE |
HEA |
53.5 |
60.0 |
HD |
CD |
CG |
HDA |
120.0 |
120.0 |
HG |
CG |
CD |
HGA |
120.0 |
120.0 |
CE |
CD |
HD |
CG |
238.9 |
239.9 |
CE |
CD |
HD |
HDA |
119.4 |
119.9 |
HD |
CD |
CE |
NZ |
293.5 |
300.0 |
HD |
CD |
CE |
HE |
53.5 |
60.1 |
HD |
CD |
CE |
HEA |
173.5 |
180.1 |
CG |
CD |
HD |
HDA |
240.5 |
240.0 |
HD |
CD |
CG |
HG |
306.1 |
300.0 |
HD |
CD |
CG |
HGA |
186.1 |
180.0 |
CE |
CD |
HDA |
CG |
121.1 |
120.0 |
CE |
CD |
HDA |
HD |
240.6 |
240.1 |
HDA |
CD |
CE |
NZ |
53.5 |
59.9 |
HDA |
CD |
CE |
HE |
173.5 |
180.0 |
HDA |
CD |
CE |
HEA |
293.5 |
300.0 |
CG |
CD |
HDA |
HD |
119.5 |
120.0 |
HDA |
CD |
CG |
HG |
186.1 |
180.0 |
HDA |
CD |
CG |
HGA |
66.1 |
60.0 |
NZ |
CE |
CD |
CG |
173.5 |
180.0 |
NZ |
CE |
CD |
HD |
293.5 |
300.0 |
NZ |
CE |
CD |
HDA |
53.5 |
59.9 |
CD |
CE |
NZ |
HE |
120.0 |
120.0 |
CD |
CE |
NZ |
HEA |
240.0 |
240.0 |
HE |
CE |
NZ |
HEA |
120.0 |
120.0 |
HNZ |
NZ |
CE |
HNZA |
240.0 |
236.1 |
HE |
CE |
CD |
CG |
293.5 |
300.0 |
HE |
CE |
CD |
HD |
53.5 |
60.1 |
HE |
CE |
CD |
HDA |
173.5 |
180.0 |
CD |
CE |
HE |
NZ |
239.4 |
240.0 |
CD |
CE |
HE |
HEA |
119.7 |
120.0 |
NZ |
CE |
HE |
HEA |
240.3 |
240.0 |
HE |
CE |
NZ |
HNZ |
60.0 |
296.0 |
HE |
CE |
NZ |
HNZA |
180.0 |
60.0 |
HEA |
CE |
CD |
CG |
53.5 |
60.0 |
HEA |
CE |
CD |
HD |
173.5 |
180.1 |
HEA |
CE |
CD |
HDA |
293.5 |
300.0 |
CD |
CE |
HEA |
NZ |
120.6 |
120.0 |
CD |
CE |
HEA |
HE |
240.3 |
240.0 |
NZ |
CE |
HEA |
HE |
119.7 |
120.0 |
HEA |
CE |
NZ |
HNZ |
300.0 |
176.1 |
HEA |
CE |
NZ |
HNZA |
60.0 |
300.0 |
HG |
CG |
CB |
HA |
169.6 |
175.1 |
CB |
CG |
HG |
CD |
240.1 |
240.0 |
CB |
CG |
HG |
HGA |
120.0 |
119.9 |
HG |
CG |
CD |
HD |
306.1 |
300.0 |
HG |
CG |
CD |
HDA |
186.1 |
180.0 |
CD |
CG |
HG |
HGA |
240.0 |
240.0 |
HGA |
CG |
CB |
HA |
289.6 |
295.0 |
CB |
CG |
HGA |
CD |
119.9 |
120.0 |
CB |
CG |
HGA |
HG |
239.9 |
240.1 |
HGA |
CG |
CD |
HD |
186.1 |
180.0 |
HGA |
CG |
CD |
HDA |
66.1 |
60.0 |
CD |
CG |
HGA |
HG |
120.0 |
120.0 |
HNZ |
NZ |
CE |
HE |
60.0 |
296.0 |
HNZ |
NZ |
CE |
HEA |
300.0 |
176.1 |
CE |
NZ |
HNZ |
HNZA |
120.0 |
123.9 |
HNZA |
NZ |
CE |
HE |
180.0 |
60.0 |
HNZA |
NZ |
CE |
HEA |
60.0 |
300.0 |
CE |
NZ |
HNZA |
HNZ |
240.0 |
236.1 |