PDB Chemical Component KAP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for KAP
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA |
C |
1.523 |
1.506 |
| CA |
CB |
1.520 |
1.529 |
| CA |
HA2 |
1.114 |
1.090 |
| CA |
HA1 |
1.116 |
1.089 |
| C |
OI1 |
1.253 |
1.341 |
| C |
OI2 |
1.250 |
1.209 |
| OI1 |
HO1 |
0.950 |
0.966 |
| CB |
CG |
1.507 |
1.529 |
| CB |
HB2 |
1.115 |
1.090 |
| CB |
HB1 |
1.114 |
1.089 |
| CG |
CD |
1.522 |
1.529 |
| CG |
HG2 |
1.114 |
1.090 |
| CG |
HG1 |
1.115 |
1.090 |
| CD |
CE |
1.501 |
1.529 |
| CD |
HD2 |
1.116 |
1.088 |
| CD |
HD1 |
1.115 |
1.090 |
| CE |
CZ |
1.477 |
1.507 |
| CE |
HE2 |
1.114 |
1.090 |
| CE |
HE1 |
1.115 |
1.090 |
| CZ |
CH |
1.547 |
1.507 |
| CZ |
O |
1.249 |
1.207 |
| CH |
CS |
1.517 |
1.530 |
| CH |
N |
1.458 |
1.468 |
| CH |
HH |
1.115 |
1.090 |
| CS |
HS3 |
1.115 |
1.091 |
| CS |
HS2 |
1.115 |
1.090 |
| CS |
HS1 |
1.114 |
1.090 |
| N |
H1 |
1.021 |
1.009 |
| N |
H2 |
1.020 |
1.010 |
Bond Angles for KAP
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
109.9 |
109.5 |
| C |
CA |
HA2 |
112.1 |
109.4 |
| C |
CA |
HA1 |
112.0 |
109.5 |
| CA |
C |
OI1 |
122.6 |
120.1 |
| CA |
C |
OI2 |
115.2 |
120.0 |
| CB |
CA |
HA2 |
112.0 |
109.5 |
| CB |
CA |
HA1 |
112.0 |
109.5 |
| CA |
CB |
CG |
111.2 |
109.5 |
| CA |
CB |
HB2 |
111.6 |
109.4 |
| CA |
CB |
HB1 |
111.6 |
109.5 |
| HA2 |
CA |
HA1 |
98.4 |
109.4 |
| OI1 |
C |
OI2 |
122.2 |
119.9 |
| C |
OI1 |
HO1 |
122.6 |
120.1 |
| CG |
CB |
HB2 |
111.5 |
109.4 |
| CG |
CB |
HB1 |
111.5 |
109.5 |
| CB |
CG |
CD |
114.3 |
109.5 |
| CB |
CG |
HG2 |
110.4 |
109.5 |
| CB |
CG |
HG1 |
110.5 |
109.6 |
| HB2 |
CB |
HB1 |
98.9 |
109.5 |
| CD |
CG |
HG2 |
110.4 |
109.4 |
| CD |
CG |
HG1 |
110.4 |
109.4 |
| CG |
CD |
CE |
109.1 |
109.5 |
| CG |
CD |
HD2 |
112.4 |
109.5 |
| CG |
CD |
HD1 |
112.3 |
109.4 |
| HG2 |
CG |
HG1 |
99.8 |
109.4 |
| CE |
CD |
HD2 |
112.4 |
109.5 |
| CE |
CD |
HD1 |
112.4 |
109.4 |
| CD |
CE |
CZ |
117.9 |
109.5 |
| CD |
CE |
HE2 |
109.1 |
109.5 |
| CD |
CE |
HE1 |
109.1 |
109.5 |
| HD2 |
CD |
HD1 |
98.0 |
109.5 |
| CZ |
CE |
HE2 |
109.1 |
109.4 |
| CZ |
CE |
HE1 |
109.2 |
109.4 |
| CE |
CZ |
CH |
130.5 |
120.0 |
| CE |
CZ |
O |
118.8 |
120.0 |
| HE2 |
CE |
HE1 |
101.0 |
109.4 |
| CH |
CZ |
O |
110.7 |
120.0 |
| CZ |
CH |
CS |
111.6 |
109.4 |
| CZ |
CH |
N |
111.1 |
109.5 |
| CZ |
CH |
HH |
107.3 |
109.5 |
| CS |
CH |
N |
110.8 |
109.5 |
| CS |
CH |
HH |
107.7 |
109.5 |
| CH |
CS |
HS3 |
111.6 |
109.4 |
| CH |
CS |
HS2 |
111.4 |
109.5 |
| CH |
CS |
HS1 |
111.4 |
109.5 |
| N |
CH |
HH |
108.2 |
109.5 |
| CH |
N |
H1 |
111.1 |
106.7 |
| CH |
N |
H2 |
111.6 |
106.7 |
| HS3 |
CS |
HS2 |
111.4 |
109.5 |
| HS3 |
CS |
HS1 |
111.4 |
109.5 |
| HS2 |
CS |
HS1 |
99.0 |
109.5 |
| H1 |
N |
H2 |
111.5 |
106.6 |
Torsion Angles for KAP
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
C |
HA2 |
234.7 |
120.0 |
| CB |
CA |
C |
HA1 |
125.2 |
239.9 |
| C |
CA |
CB |
CG |
246.0 |
180.0 |
| C |
CA |
CB |
HB2 |
11.2 |
60.1 |
| C |
CA |
CB |
HB1 |
120.8 |
300.1 |
| HA2 |
CA |
C |
HA1 |
250.5 |
119.9 |
| OI1 |
C |
CA |
OI2 |
179.8 |
180.1 |
| CA |
C |
OI1 |
HO1 |
180.0 |
180.0 |
| C |
CA |
CB |
HA2 |
125.3 |
240.0 |
| C |
CA |
CB |
HA1 |
234.8 |
120.1 |
| CB |
CA |
C |
OI1 |
13.9 |
180.0 |
| CB |
CA |
C |
OI2 |
194.1 |
359.9 |
| HA2 |
CA |
CB |
HA1 |
109.5 |
240.1 |
| CG |
CB |
CA |
HB2 |
234.8 |
119.9 |
| CG |
CB |
CA |
HB1 |
125.2 |
239.9 |
| CA |
CB |
CG |
CD |
103.2 |
180.0 |
| CA |
CB |
CG |
HG2 |
228.5 |
60.1 |
| CA |
CB |
CG |
HG1 |
338.0 |
300.1 |
| HB2 |
CB |
CA |
HB1 |
250.4 |
120.0 |
| C |
CA |
HA2 |
CB |
235.9 |
120.1 |
| C |
CA |
HA2 |
HA1 |
118.0 |
240.1 |
| HA2 |
CA |
C |
OI1 |
139.2 |
60.0 |
| HA2 |
CA |
C |
OI2 |
319.4 |
239.9 |
| CB |
CA |
HA2 |
HA1 |
242.1 |
120.0 |
| HA2 |
CA |
CB |
CG |
120.7 |
300.0 |
| HA2 |
CA |
CB |
HB2 |
245.9 |
180.1 |
| HA2 |
CA |
CB |
HB1 |
355.5 |
60.1 |
| C |
CA |
HA1 |
CB |
124.1 |
239.9 |
| C |
CA |
HA1 |
HA2 |
242.0 |
119.9 |
| HA1 |
CA |
C |
OI1 |
248.7 |
300.1 |
| HA1 |
CA |
C |
OI2 |
68.9 |
120.0 |
| CB |
CA |
HA1 |
HA2 |
117.9 |
240.0 |
| HA1 |
CA |
CB |
CG |
11.3 |
59.9 |
| HA1 |
CA |
CB |
HB2 |
136.5 |
300.0 |
| HA1 |
CA |
CB |
HB1 |
246.0 |
180.0 |
| OI1 |
C |
CA |
CB |
13.9 |
180.0 |
| OI1 |
C |
CA |
HA2 |
139.2 |
60.0 |
| OI1 |
C |
CA |
HA1 |
248.7 |
300.1 |
| CA |
C |
OI1 |
OI2 |
180.3 |
179.9 |
| OI2 |
C |
CA |
CB |
194.1 |
359.9 |
| OI2 |
C |
CA |
HA2 |
319.4 |
239.9 |
| OI2 |
C |
CA |
HA1 |
68.9 |
120.0 |
| CA |
C |
OI2 |
OI1 |
179.8 |
180.1 |
| OI2 |
C |
OI1 |
HO1 |
359.7 |
0.1 |
| HO1 |
OI1 |
C |
OI2 |
359.7 |
0.1 |
| CG |
CB |
CA |
HA2 |
120.7 |
300.0 |
| CG |
CB |
CA |
HA1 |
11.3 |
59.9 |
| CA |
CB |
CG |
HB2 |
125.2 |
240.1 |
| CA |
CB |
CG |
HB1 |
234.7 |
120.1 |
| HB2 |
CB |
CG |
HB1 |
109.5 |
240.0 |
| CD |
CG |
CB |
HG2 |
234.7 |
120.0 |
| CD |
CG |
CB |
HG1 |
125.2 |
240.0 |
| CB |
CG |
CD |
CE |
132.6 |
180.1 |
| CB |
CG |
CD |
HD2 |
257.9 |
60.0 |
| CB |
CG |
CD |
HD1 |
7.3 |
300.0 |
| HG2 |
CG |
CB |
HG1 |
250.5 |
120.0 |
| HB2 |
CB |
CA |
HA2 |
245.9 |
180.1 |
| HB2 |
CB |
CA |
HA1 |
136.5 |
300.0 |
| CA |
CB |
HB2 |
CG |
235.0 |
120.0 |
| CA |
CB |
HB2 |
HB1 |
117.5 |
240.0 |
| CG |
CB |
HB2 |
HB1 |
242.6 |
120.0 |
| HB2 |
CB |
CG |
CD |
338.0 |
300.0 |
| HB2 |
CB |
CG |
HG2 |
103.3 |
180.0 |
| HB2 |
CB |
CG |
HG1 |
212.7 |
60.0 |
| HB1 |
CB |
CA |
HA2 |
355.5 |
60.1 |
| HB1 |
CB |
CA |
HA1 |
246.0 |
180.0 |
| CA |
CB |
HB1 |
CG |
125.1 |
239.9 |
| CA |
CB |
HB1 |
HB2 |
242.5 |
120.0 |
| CG |
CB |
HB1 |
HB2 |
117.4 |
240.1 |
| HB1 |
CB |
CG |
CD |
228.5 |
60.0 |
| HB1 |
CB |
CG |
HG2 |
353.8 |
300.0 |
| HB1 |
CB |
CG |
HG1 |
103.2 |
180.0 |
| CD |
CG |
CB |
HB2 |
338.0 |
300.0 |
| CD |
CG |
CB |
HB1 |
228.5 |
60.0 |
| CB |
CG |
CD |
HG2 |
125.3 |
240.0 |
| CB |
CG |
CD |
HG1 |
234.7 |
120.1 |
| HG2 |
CG |
CD |
HG1 |
109.5 |
240.1 |
| CE |
CD |
CG |
HD2 |
234.7 |
120.0 |
| CE |
CD |
CG |
HD1 |
125.3 |
240.0 |
| CG |
CD |
CE |
CZ |
117.7 |
180.0 |
| CG |
CD |
CE |
HE2 |
242.9 |
60.0 |
| CG |
CD |
CE |
HE1 |
352.4 |
300.0 |
| HD2 |
CD |
CG |
HD1 |
250.6 |
120.0 |
| HG2 |
CG |
CB |
HB2 |
103.3 |
180.0 |
| HG2 |
CG |
CB |
HB1 |
353.8 |
300.0 |
| CB |
CG |
HG2 |
CD |
232.5 |
120.0 |
| CB |
CG |
HG2 |
HG1 |
116.3 |
239.9 |
| CD |
CG |
HG2 |
HG1 |
243.8 |
119.9 |
| HG2 |
CG |
CD |
CE |
7.3 |
300.1 |
| HG2 |
CG |
CD |
HD2 |
132.6 |
180.0 |
| HG2 |
CG |
CD |
HD1 |
242.0 |
60.0 |
| HG1 |
CG |
CB |
HB2 |
212.7 |
60.0 |
| HG1 |
CG |
CB |
HB1 |
103.2 |
180.0 |
| CB |
CG |
HG1 |
CD |
127.4 |
239.9 |
| CB |
CG |
HG1 |
HG2 |
243.7 |
120.0 |
| CD |
CG |
HG1 |
HG2 |
116.3 |
240.1 |
| HG1 |
CG |
CD |
CE |
257.9 |
60.0 |
| HG1 |
CG |
CD |
HD2 |
23.2 |
299.9 |
| HG1 |
CG |
CD |
HD1 |
132.6 |
179.9 |
| CE |
CD |
CG |
HG2 |
7.3 |
300.1 |
| CE |
CD |
CG |
HG1 |
257.9 |
60.0 |
| CG |
CD |
CE |
HD2 |
125.3 |
240.0 |
| CG |
CD |
CE |
HD1 |
234.7 |
120.0 |
| HD2 |
CD |
CE |
HD1 |
109.5 |
240.0 |
| CZ |
CE |
CD |
HE2 |
234.8 |
120.0 |
| CZ |
CE |
CD |
HE1 |
125.3 |
240.0 |
| CD |
CE |
CZ |
CH |
13.2 |
180.0 |
| CD |
CE |
CZ |
O |
193.2 |
359.9 |
| HE2 |
CE |
CD |
HE1 |
250.5 |
120.0 |
| HD2 |
CD |
CG |
HG2 |
132.6 |
180.0 |
| HD2 |
CD |
CG |
HG1 |
23.2 |
299.9 |
| CG |
CD |
HD2 |
CE |
236.6 |
120.0 |
| CG |
CD |
HD2 |
HD1 |
118.2 |
240.0 |
| CE |
CD |
HD2 |
HD1 |
241.7 |
120.0 |
| HD2 |
CD |
CE |
CZ |
352.4 |
300.0 |
| HD2 |
CD |
CE |
HE2 |
117.7 |
180.0 |
| HD2 |
CD |
CE |
HE1 |
227.2 |
60.0 |
| HD1 |
CD |
CG |
HG2 |
242.0 |
60.0 |
| HD1 |
CD |
CG |
HG1 |
132.6 |
179.9 |
| CG |
CD |
HD1 |
CE |
123.4 |
240.0 |
| CG |
CD |
HD1 |
HD2 |
241.7 |
120.0 |
| CE |
CD |
HD1 |
HD2 |
118.3 |
240.0 |
| HD1 |
CD |
CE |
CZ |
243.0 |
60.0 |
| HD1 |
CD |
CE |
HE2 |
8.2 |
300.0 |
| HD1 |
CD |
CE |
HE1 |
117.7 |
180.0 |
| CZ |
CE |
CD |
HD2 |
352.4 |
300.0 |
| CZ |
CE |
CD |
HD1 |
243.0 |
60.0 |
| CD |
CE |
CZ |
HE2 |
125.2 |
239.9 |
| CD |
CE |
CZ |
HE1 |
234.7 |
120.0 |
| HE2 |
CE |
CZ |
HE1 |
109.5 |
240.1 |
| CH |
CZ |
CE |
O |
180.0 |
180.1 |
| CE |
CZ |
CH |
CS |
45.1 |
270.0 |
| CE |
CZ |
CH |
N |
280.9 |
149.9 |
| CE |
CZ |
CH |
HH |
162.8 |
30.0 |
| HE2 |
CE |
CD |
HD2 |
117.7 |
180.0 |
| HE2 |
CE |
CD |
HD1 |
8.2 |
300.0 |
| CD |
CE |
HE2 |
CZ |
229.8 |
120.1 |
| CD |
CE |
HE2 |
HE1 |
114.9 |
240.0 |
| CZ |
CE |
HE2 |
HE1 |
245.1 |
119.9 |
| HE2 |
CE |
CZ |
CH |
247.9 |
300.1 |
| HE2 |
CE |
CZ |
O |
68.0 |
120.0 |
| HE1 |
CE |
CD |
HD2 |
227.2 |
60.0 |
| HE1 |
CE |
CD |
HD1 |
117.7 |
180.0 |
| CD |
CE |
HE1 |
CZ |
130.2 |
240.0 |
| CD |
CE |
HE1 |
HE2 |
245.1 |
120.1 |
| CZ |
CE |
HE1 |
HE2 |
114.9 |
240.1 |
| HE1 |
CE |
CZ |
CH |
138.4 |
60.0 |
| HE1 |
CE |
CZ |
O |
318.5 |
239.9 |
| CH |
CZ |
CE |
HE2 |
247.9 |
300.1 |
| CH |
CZ |
CE |
HE1 |
138.4 |
60.0 |
| CE |
CZ |
CH |
O |
180.0 |
179.9 |
| CS |
CH |
CZ |
N |
124.2 |
120.0 |
| CS |
CH |
CZ |
HH |
242.3 |
240.0 |
| CZ |
CH |
CS |
HS3 |
180.0 |
180.0 |
| CZ |
CH |
CS |
HS2 |
305.2 |
300.0 |
| CZ |
CH |
CS |
HS1 |
54.8 |
60.0 |
| N |
CH |
CZ |
HH |
118.1 |
120.0 |
| CZ |
CH |
N |
H1 |
179.9 |
60.0 |
| CZ |
CH |
N |
H2 |
54.8 |
173.7 |
| O |
CZ |
CE |
HE2 |
68.0 |
120.0 |
| O |
CZ |
CE |
HE1 |
318.5 |
239.9 |
| CE |
CZ |
O |
CH |
180.0 |
180.1 |
| O |
CZ |
CH |
CS |
225.1 |
90.1 |
| O |
CZ |
CH |
N |
100.9 |
330.0 |
| O |
CZ |
CH |
HH |
342.8 |
210.0 |
| CS |
CH |
CZ |
O |
225.1 |
90.1 |
| CZ |
CH |
CS |
N |
235.6 |
240.0 |
| CZ |
CH |
CS |
HH |
117.5 |
120.0 |
| N |
CH |
CS |
HH |
241.9 |
240.0 |
| CS |
CH |
N |
H1 |
55.3 |
300.0 |
| CS |
CH |
N |
H2 |
290.1 |
53.8 |
| HS3 |
CS |
CH |
HS2 |
234.8 |
240.0 |
| HS3 |
CS |
CH |
HS1 |
125.3 |
120.0 |
| HS2 |
CS |
CH |
HS1 |
250.5 |
240.0 |
| N |
CH |
CZ |
O |
100.9 |
330.0 |
| CZ |
CH |
N |
CS |
124.7 |
120.0 |
| CZ |
CH |
N |
HH |
242.4 |
240.0 |
| CS |
CH |
N |
HH |
117.8 |
120.0 |
| N |
CH |
CS |
HS3 |
304.4 |
300.0 |
| N |
CH |
CS |
HS2 |
69.6 |
60.0 |
| N |
CH |
CS |
HS1 |
179.1 |
180.0 |
| H1 |
N |
CH |
H2 |
125.2 |
246.3 |
| HH |
CH |
CZ |
O |
342.8 |
210.0 |
| CZ |
CH |
HH |
CS |
239.7 |
240.1 |
| CZ |
CH |
HH |
N |
120.0 |
120.0 |
| CS |
CH |
HH |
N |
240.2 |
240.0 |
| HH |
CH |
CS |
HS3 |
62.5 |
60.0 |
| HH |
CH |
CS |
HS2 |
187.7 |
180.0 |
| HH |
CH |
CS |
HS1 |
297.2 |
300.0 |
| HH |
CH |
N |
H1 |
297.5 |
180.0 |
| HH |
CH |
N |
H2 |
172.3 |
293.7 |
| HS3 |
CS |
CH |
N |
304.4 |
300.0 |
| HS3 |
CS |
CH |
HH |
62.5 |
60.0 |
| CH |
CS |
HS3 |
HS2 |
125.2 |
120.0 |
| CH |
CS |
HS3 |
HS1 |
234.7 |
240.0 |
| HS2 |
CS |
HS3 |
HS1 |
109.5 |
120.1 |
| HS2 |
CS |
CH |
N |
69.6 |
60.0 |
| HS2 |
CS |
CH |
HH |
187.7 |
180.0 |
| CH |
CS |
HS2 |
HS3 |
234.7 |
240.1 |
| CH |
CS |
HS2 |
HS1 |
117.3 |
120.0 |
| HS3 |
CS |
HS2 |
HS1 |
242.7 |
240.0 |
| HS1 |
CS |
CH |
N |
179.1 |
180.0 |
| HS1 |
CS |
CH |
HH |
297.2 |
300.0 |
| CH |
CS |
HS1 |
HS3 |
125.4 |
119.9 |
| CH |
CS |
HS1 |
HS2 |
242.7 |
240.0 |
| HS3 |
CS |
HS1 |
HS2 |
117.3 |
120.0 |
| H1 |
N |
CH |
HH |
297.5 |
180.0 |
| CH |
N |
H1 |
H2 |
234.8 |
113.8 |
| H2 |
N |
CH |
HH |
172.3 |
293.7 |
| CH |
N |
H2 |
H1 |
124.9 |
246.2 |