PDB Chemical Component KAN

Ideal Model

Chemical Description

Name KANAMYCIN A
Formula C18 H36 N4 O11
Formal charge 0
Molecular weight 484.499 g/mol
Component type NON-POLYMER

Chemical features

Atom count 69
Chiral atom count 15
Chiral atoms C1 C2 C3 C4 C5 C7 C8 C9 C10 C11 C13 C14 C15 C16 C17
Bond count 71
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (1S,2R,3R,4S,6R)-4,6-diamino-3-[(6-amino-6-deoxy-alpha-D-glucopyranosyl)oxy]-2-hydroxycyclohexyl 3-amino-3-deoxy-alpha-D-glucopyranoside
Systematic name (OpenEye OEToolkits) (2R,3S,4S,5R,6R)-2-(aminomethyl)-6-[(1R,2R,3S,4R,6S)-4,6-diamino-3-[(2S,3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-hydroxy-cyclohexyl]oxy-oxane-3,4,5-triol

Chemical Descriptors

Stereo SMILES (CACTVS) NC[C@H]1O[C@H](O[C@@H]2[C@@H](N)C[C@@H](N)[C@H](O[C@H]3O[C@H](CO)[C@@H](O)[C@H](N)[C@H]3O)[C@H]2O)[C@H](O)[C@@H](O)[C@@H]1O
SMILES (CACTVS) NC[CH]1O[CH](O[CH]2[CH](N)C[CH](N)[CH](O[CH]3O[CH](CO)[CH](O)[CH](N)[CH]3O)[CH]2O)[CH](O)[CH](O)[CH]1O
Stereo SMILES (OpenEye) C1[C@H]([C@@H]([C@H]([C@@H]([C@H]1N)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CN)O)O)O)O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)N)O)N
InChI descriptor InChI=1S/C18H36N4O11/c19-2-6-10(25)12(27)13(28)18(30-6)33-16-5(21)1-4(20)15(14(16)29)32-17-11(26)8(22)9(24)7(3-23)31-17/h4-18,23-29H,1-3,19-22H2/t4-,5+,6-,7-,8+,9-,10-,11-,12+,13-,14-,15+,16-,17-,18-/m1/s1
InChIKey descriptor SBUJHOSQTJFQJX-NOAMYHISSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1KNY
Processing site EBI