PDB Chemical Component K87

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for K87

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C22 C26 1.375 1.382
C22 C19 1.389 1.383
C26 C21 1.390 1.383
C19 C12 1.374 1.385
C21 C18 1.384 1.386
C17 O4 1.441 1.429
C17 C20 1.504 1.530
O4 C9 1.380 1.357
C20 C25 1.511 1.507
C12 C18 1.398 1.392
C12 O3 1.426 1.359
C24 N5 1.335 1.321
C24 C28 1.372 1.388
C18 O5 1.435 1.360
N3 C9 1.328 1.326
N3 C10 1.329 1.326
N5 C13 1.333 1.326
C28 C23 1.373 1.386
C9 C7 1.394 1.395
C13 C10 1.494 1.483
C13 N4 1.331 1.325
C23 N4 1.336 1.322
C10 N2 1.331 1.325
C7 O3 1.427 1.360
C7 C4 1.402 1.397
O1 S1 1.437 1.421
N2 C4 1.340 1.328
C25 N6 1.344 1.348
C25 O6 1.223 1.212
C4 N1 1.315 1.389
O5 C27 1.430 1.429
N6 C29 1.457 1.399
C35 C31 1.502 1.506
N1 S1 1.628 1.656
S1 O2 1.438 1.421
S1 C1 1.760 1.762
C29 C31 1.399 1.389
C29 C30 1.395 1.388
C31 C34 1.393 1.381
C3 C1 1.382 1.383
C3 C6 1.382 1.382
C1 C2 1.382 1.383
C33 C30 1.500 1.507
C6 C8 1.395 1.383
C30 C32 1.393 1.381
C34 C36 1.378 1.382
C2 C5 1.382 1.382
C8 C5 1.396 1.383
C8 C11 1.533 1.507
C15 C11 1.534 1.530
C32 C36 1.378 1.383
C14 C11 1.533 1.530
C11 C16 1.534 1.530
N1 H1 0.999 0.970
C2 H2 1.080 1.080
C3 H3 1.080 1.080
C5 H4 1.080 1.080
C6 H5 1.080 1.079
C14 H6 1.100 1.090
C14 H7 1.100 1.090
C14 H8 1.100 1.090
C15 H9 1.100 1.089
C15 H10 1.100 1.090
C15 H11 1.100 1.091
C16 H12 1.100 1.089
C16 H13 1.100 1.090
C16 H14 1.100 1.090
C17 H15 1.100 1.091
C17 H16 1.100 1.090
C19 H17 1.080 1.080
C20 H18 1.100 1.089
C20 H19 1.100 1.090
C21 H20 1.080 1.080
C22 H21 1.080 1.080
C23 H22 1.080 1.080
C24 H23 1.080 1.080
C26 H24 1.080 1.080
C27 H25 1.100 1.090
C27 H26 1.100 1.090
C27 H27 1.100 1.090
C28 H28 1.080 1.080
N6 H29 1.000 0.970
C32 H30 1.080 1.080
C33 H31 1.100 1.090
C33 H32 1.100 1.089
C33 H33 1.100 1.090
C34 H34 1.080 1.080
C35 H35 1.100 1.090
C35 H36 1.100 1.091
C35 H37 1.100 1.090
C36 H38 1.080 1.080

Bond Angles for K87

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C26 C22 H21 119.9 119.9
C22 C26 H24 119.9 119.9
C22 C19 H17 120.1 120.0
C26 C21 H20 119.9 120.0
C21 C18 O5 125.4 120.0
C17 C20 C25 113.3 109.4
C20 C17 H15 110.1 109.4
C20 C17 H16 110.1 109.5
C17 C20 H18 108.5 109.5
C17 C20 H19 108.5 109.5
C20 C25 N6 115.9 120.0
C20 C25 O6 121.7 120.0
C25 C20 H18 108.5 109.5
C25 C20 H19 108.5 109.4
C12 C18 O5 115.7 120.1
C28 C24 H23 118.7 120.4
C24 C28 H28 121.7 120.7
C18 O5 C27 117.2 117.0
C28 C23 H22 118.8 120.4
C9 C7 O3 122.8 120.8
O1 S1 O2 119.4 123.1
N6 C25 O6 122.4 120.0
C25 N6 C29 125.4 120.0
C25 N6 H29 117.3 120.0
C4 N1 H1 105.5 120.1
O5 C27 H25 109.5 109.5
O5 C27 H26 109.4 109.5
O5 C27 H27 109.4 109.5
N6 C29 C31 119.4 120.0
N6 C29 C30 118.8 120.1
C29 N6 H29 117.3 120.0
N1 S1 O2 108.1 106.4
C1 S1 O2 108.4 106.4
S1 C1 C2 120.0 120.0
C30 C29 C31 121.9 119.9
C29 C31 C34 117.9 119.9
C29 C30 C32 118.1 119.9
C31 C34 C36 121.0 120.1
C31 C34 H34 119.5 119.9
C3 C6 C8 121.1 120.0
C6 C3 H3 120.1 120.0
C3 C6 H5 119.5 120.0
C1 C2 C5 119.9 120.0
C1 C2 H2 120.1 120.0
C6 C8 C11 121.0 120.0
C8 C6 H5 119.4 120.0
C30 C32 C36 120.9 120.0
C30 C32 H30 119.5 120.0
C32 C36 C34 120.2 120.2
C36 C34 H34 119.5 120.0
C34 C36 H38 119.9 119.9
C5 C2 H2 120.1 120.0
C2 C5 H4 119.5 120.0
C8 C5 H4 119.5 120.0
C8 C11 C16 110.9 109.4
C15 C11 C16 108.3 109.5
C36 C32 H30 119.6 120.0
C32 C36 H38 119.9 119.9
C14 C11 C16 108.4 109.5
C11 C16 H12 109.5 109.5
C11 C16 H13 109.5 109.4
C11 C16 H14 109.5 109.5
H6 C14 H7 109.5 109.5
H6 C14 H8 109.4 109.5
H7 C14 H8 109.5 109.5
H9 C15 H10 109.5 109.5
H9 C15 H11 109.4 109.5
H10 C15 H11 109.5 109.4
H12 C16 H13 109.5 109.5
H12 C16 H14 109.4 109.5
H13 C16 H14 109.5 109.4
H15 C17 H16 109.5 109.5
H18 C20 H19 109.5 109.5
H25 C27 H26 109.5 109.5
H25 C27 H27 109.5 109.4
H26 C27 H27 109.5 109.5
H31 C33 H32 109.5 109.5
H31 C33 H33 109.5 109.4
H32 C33 H33 109.5 109.5
H35 C35 H36 109.4 109.4
H35 C35 H37 109.5 109.5
H36 C35 H37 109.5 109.4

Torsion Angles for K87

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C26 C22 C19 H17 180.4 179.5
C22 C26 C21 H20 179.8 179.4
C19 C12 C18 O5 180.4 180.3
C12 C18 C21 O5 180.6 180.0
C21 C18 O5 C27 357.4 360.0
C17 C20 C25 N6 9.3 180.0
C17 C20 C25 O6 188.8 0.0
C25 C20 C17 H18 239.4 240.0
C25 C20 C17 H19 120.6 120.0
H15 C17 C20 H16 120.8 120.0
H18 C20 C17 H19 241.1 240.0
C25 C20 C17 H15 317.9 60.0
C25 C20 C17 H16 197.1 300.0
C17 C20 C25 H18 120.6 120.0
C17 C20 C25 H19 239.4 240.0
N6 C25 C20 O6 180.5 179.9
C20 C25 N6 C29 173.8 176.2
C20 C25 N6 H29 353.8 356.3
H18 C20 C25 H19 118.8 120.0
C21 C18 C12 O5 179.4 180.0
C12 C18 O5 C27 176.8 180.0
C24 C28 C23 H22 179.8 179.8
C18 O5 C27 H25 180.0 180.0
C18 O5 C27 H26 300.0 300.0
C18 O5 C27 H27 60.0 60.0
C7 C4 N1 H1 295.8 0.1
N1 S1 O1 O2 238.6 237.1
C1 S1 O1 O2 124.5 123.0
O1 S1 C1 C2 154.2 203.6
N2 C4 N1 H1 115.7 179.8
C20 C25 N6 O6 179.5 180.1
N6 C25 C20 H18 248.8 59.9
N6 C25 C20 H19 129.9 300.0
C25 N6 C29 C31 298.7 127.2
C25 N6 C29 C30 117.4 307.5
C29 N6 C25 H29 180.0 179.9
C20 C25 O6 N6 180.5 179.9
O6 C25 C20 H18 68.3 240.0
O6 C25 C20 H19 309.4 120.1
O6 C25 N6 C29 354.3 356.1
O6 C25 N6 H29 174.3 176.2
H25 C27 O5 H26 240.0 240.0
H25 C27 O5 H27 120.0 120.0
H26 C27 O5 H27 240.0 240.0
C29 N6 C25 O6 354.3 356.1
C25 N6 C29 H29 180.0 180.1
C30 C29 N6 C31 178.6 180.3
N6 C29 C31 C34 179.2 180.0
N6 C29 C30 C32 181.2 180.0
C35 C31 C34 C36 180.5 180.0
C35 C31 C34 H34 0.5 0.0
O1 S1 N1 O2 128.6 132.9
C1 S1 N1 O2 243.5 246.5
N1 S1 C1 C2 41.4 90.0
O2 S1 C1 C2 285.1 336.5
O1 S1 C1 O2 229.1 227.1
N1 S1 C1 O2 116.3 113.5
S1 C1 C2 C5 180.7 180.0
S1 C1 C2 H2 0.7 359.9
N6 C29 C31 C30 178.6 180.3
C31 C29 N6 H29 118.8 307.1
C31 C29 C30 C32 359.8 0.3
C29 C31 C34 C36 359.4 0.0
C29 C31 C34 H34 179.4 180.1
N6 C29 C30 C31 181.4 179.7
C30 C29 N6 H29 297.4 127.4
C30 C29 C31 C34 0.6 359.7
C29 C30 C32 C36 359.7 0.0
C29 C30 C32 H30 179.7 180.0
C32 C36 C34 C31 0.1 0.3
C36 C34 C31 H34 180.0 179.9
C31 C34 C36 H38 180.1 180.0
C3 C1 C2 C5 358.7 0.3
C3 C1 C2 H2 178.7 180.3
C3 C6 C8 C11 179.8 180.0
C8 C6 C3 H5 180.0 179.9
C2 C1 S1 O2 285.1 336.5
C5 C2 C1 H2 180.0 180.1
C1 C2 C5 H4 181.2 179.9
C33 C30 C32 C36 180.1 180.1
C33 C30 C32 H30 0.1 360.0
C8 C6 C3 H3 180.5 180.0
C3 C6 C8 H5 180.0 180.1
C6 C8 C5 H4 179.9 179.7
C6 C8 C11 C16 216.3 60.1
C32 C30 C29 C31 359.8 0.3
C30 C32 C36 C34 0.4 359.7
C36 C32 C30 H30 180.0 180.1
C30 C32 C36 H38 180.4 180.0
C31 C34 C36 H34 180.0 180.1
C34 C36 C32 H30 180.4 179.8
C32 C36 C34 H38 180.0 180.3
C1 C2 C5 H2 180.0 179.9
C8 C5 C2 H4 180.0 180.1
C3 C6 C8 C5 359.3 0.3
C8 C5 C2 H2 181.2 180.1
C2 C5 C8 H4 180.0 179.9
C11 C8 C6 H5 359.8 359.9
C11 C8 C5 H4 359.4 0.1
C15 C11 C8 C16 240.1 240.0
C14 C11 C8 C16 120.3 120.0
C8 C11 C16 H12 180.0 60.0
C8 C11 C16 H13 300.0 180.0
C8 C11 C16 H14 60.0 300.0
C8 C11 C15 C16 121.4 120.0
C14 C11 C15 C16 242.7 240.0
C15 C11 C16 H12 301.0 180.0
C15 C11 C16 H13 61.1 300.0
C15 C11 C16 H14 181.1 60.0
C31 C34 C36 C32 0.1 0.3
C30 C32 C36 H30 180.0 179.9
C32 C36 C34 H34 180.1 180.2
C34 C36 C32 H38 180.0 179.7
C8 C11 C14 C16 238.2 240.1
C15 C11 C14 C16 117.2 120.0
C14 C11 C16 H12 58.3 300.1
C14 C11 C16 H13 178.3 60.1
C14 C11 C16 H14 298.3 180.0
H12 C16 C11 H13 240.0 240.0
H12 C16 C11 H14 120.0 120.0
H13 C16 C11 H14 240.0 240.1
H1 N1 S1 O2 43.8 358.5
C1 C2 H2 C5 180.0 180.1
H2 C2 C5 H4 1.1 360.0
H3 C3 C6 C8 180.5 180.0
H3 C3 C6 H5 0.5 0.0
H4 C5 C2 H2 1.1 360.0
C3 C6 H5 C8 180.0 179.9
H5 C6 C3 H3 0.5 0.0
H5 C6 C8 C11 359.8 359.9
H6 C14 C11 C16 301.8 180.0
H7 C14 H6 H8 120.0 120.0
H7 C14 C11 C16 61.8 300.0
H6 C14 H7 H8 240.0 240.0
H8 C14 C11 C16 181.8 60.0
H6 C14 H8 H7 120.0 120.0
H9 C15 C11 C16 58.5 300.0
H10 C15 H9 H11 120.0 120.0
H10 C15 C11 C16 178.6 60.0
H9 C15 H10 H11 240.0 240.0
H11 C15 C11 C16 298.6 180.0
H9 C15 H11 H10 120.0 120.0
C11 C16 H12 H13 120.0 120.0
C11 C16 H12 H14 240.0 240.0
H13 C16 H12 H14 120.0 120.0
C11 C16 H13 H12 239.9 240.0
C11 C16 H13 H14 120.0 119.9
H12 C16 H13 H14 240.0 240.0
C11 C16 H14 H12 120.0 120.0
C11 C16 H14 H13 240.0 240.1
H12 C16 H14 H13 120.0 120.0
H15 C17 C20 C25 317.9 60.0
C20 C17 H15 H16 238.8 240.0
H15 C17 C20 H18 78.5 180.0
H15 C17 C20 H19 197.3 300.0
H16 C17 C20 C25 197.1 300.0
C20 C17 H16 H15 121.2 120.0
H16 C17 C20 H18 317.7 60.0
H16 C17 C20 H19 76.5 180.0
C17 C20 H18 C25 236.5 240.0
H18 C20 C17 H15 78.5 180.0
H18 C20 C17 H16 317.7 60.0
C17 C20 H18 H19 118.3 120.1
H18 C20 C25 N6 248.8 59.9
H18 C20 C25 O6 68.3 240.0
C25 C20 H18 H19 241.8 240.0
C17 C20 H19 C25 123.5 120.0
H19 C20 C17 H15 197.3 300.0
H19 C20 C17 H16 76.5 180.0
C17 C20 H19 H18 241.7 239.9
H19 C20 C25 N6 129.9 300.0
H19 C20 C25 O6 309.4 120.1
C25 C20 H19 H18 118.2 120.0
H20 C21 C18 O5 359.8 0.0
H21 C22 C26 H24 359.8 359.2
H21 C22 C19 H17 0.4 0.3
H23 C24 C28 H28 359.4 0.0
H24 C26 C22 H21 359.8 359.2
H24 C26 C21 H20 359.8 0.2
O5 C27 H25 H26 120.0 120.0
O5 C27 H25 H27 240.0 240.0
H26 C27 H25 H27 120.0 120.0
O5 C27 H26 H25 240.0 240.0
O5 C27 H26 H27 119.9 120.0
H25 C27 H26 H27 240.0 240.0
O5 C27 H27 H25 120.0 120.0
O5 C27 H27 H26 240.1 240.0
H25 C27 H27 H26 120.0 120.0
H28 C28 C24 H23 359.4 0.0
H28 C28 C23 H22 359.9 0.0
H29 N6 C25 O6 174.3 176.2
C25 N6 H29 C29 180.0 179.9
H29 N6 C29 C31 118.8 307.1
H29 N6 C29 C30 297.4 127.4
C30 C32 H30 C36 180.0 180.1
H30 C32 C36 C34 180.4 179.8
H30 C32 C36 H38 0.4 0.1
H32 C33 H31 H33 120.0 120.0
H31 C33 H32 H33 240.0 240.0
H31 C33 H33 H32 120.0 120.0
C31 C34 H34 C36 180.0 179.9
H34 C34 C36 H38 0.1 359.9
H36 C35 H35 H37 120.0 119.9
H35 C35 H36 H37 240.1 240.0
H35 C35 H37 H36 119.9 119.9
C32 C36 H38 C34 180.0 179.7
H38 C36 C34 H34 0.1 359.9
H38 C36 C32 H30 0.4 0.1