PDB Chemical Component K25
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for K25
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C2 |
C3 |
1.412 |
1.388 |
| C2 |
C5 |
1.402 |
1.379 |
| C2 |
BR1 |
1.901 |
1.891 |
| C3 |
C4 |
1.401 |
1.381 |
| C3 |
BR9 |
1.915 |
1.891 |
| C4 |
C8 |
1.400 |
1.387 |
| C4 |
BR10 |
1.908 |
1.891 |
| C5 |
C7 |
1.423 |
1.397 |
| C5 |
BR11 |
1.896 |
1.891 |
| N6 |
C8 |
1.387 |
1.386 |
| N6 |
C13 |
1.353 |
1.366 |
| N6 |
HN6 |
1.020 |
0.970 |
| C7 |
C8 |
1.393 |
1.404 |
| C7 |
N14 |
1.339 |
1.360 |
| C13 |
N14 |
1.347 |
1.311 |
| C13 |
N15 |
1.396 |
1.379 |
| N15 |
C16 |
1.436 |
1.466 |
| N15 |
C17 |
1.437 |
1.465 |
| C16 |
H161 |
1.115 |
1.090 |
| C16 |
H162 |
1.115 |
1.090 |
| C16 |
H163 |
1.116 |
1.090 |
| C17 |
H171 |
1.115 |
1.090 |
| C17 |
H172 |
1.115 |
1.090 |
| C17 |
H173 |
1.115 |
1.090 |
Bond Angles for K25
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C3 |
C2 |
C5 |
121.1 |
120.4 |
| C3 |
C2 |
BR1 |
118.6 |
119.8 |
| C2 |
C3 |
C4 |
119.8 |
120.4 |
| C2 |
C3 |
BR9 |
121.5 |
119.8 |
| C5 |
C2 |
BR1 |
119.9 |
119.8 |
| C2 |
C5 |
C7 |
119.4 |
119.8 |
| C2 |
C5 |
BR11 |
122.0 |
120.1 |
| C4 |
C3 |
BR9 |
118.7 |
119.8 |
| C3 |
C4 |
C8 |
118.2 |
119.8 |
| C3 |
C4 |
BR10 |
124.6 |
120.1 |
| C8 |
C4 |
BR10 |
117.0 |
120.1 |
| C4 |
C8 |
N6 |
129.8 |
133.8 |
| C4 |
C8 |
C7 |
123.4 |
120.0 |
| C7 |
C5 |
BR11 |
117.7 |
120.1 |
| C5 |
C7 |
C8 |
118.0 |
119.5 |
| C5 |
C7 |
N14 |
133.9 |
133.3 |
| C8 |
N6 |
C13 |
106.4 |
107.3 |
| C8 |
N6 |
HN6 |
127.7 |
126.4 |
| N6 |
C8 |
C7 |
106.8 |
106.1 |
| C13 |
N6 |
HN6 |
125.9 |
126.4 |
| N6 |
C13 |
N14 |
109.8 |
109.8 |
| N6 |
C13 |
N15 |
120.3 |
125.1 |
| C8 |
C7 |
N14 |
108.1 |
107.2 |
| C7 |
N14 |
C13 |
108.1 |
109.6 |
| N14 |
C13 |
N15 |
129.0 |
125.0 |
| C13 |
N15 |
C16 |
119.9 |
120.0 |
| C13 |
N15 |
C17 |
120.1 |
120.0 |
| C16 |
N15 |
C17 |
119.9 |
120.0 |
| N15 |
C16 |
H161 |
108.5 |
109.5 |
| N15 |
C16 |
H162 |
119.9 |
109.5 |
| N15 |
C16 |
H163 |
108.5 |
109.5 |
| N15 |
C17 |
H171 |
108.4 |
109.5 |
| N15 |
C17 |
H172 |
120.1 |
109.4 |
| N15 |
C17 |
H173 |
108.4 |
109.5 |
| H161 |
C16 |
H162 |
108.4 |
109.5 |
| H161 |
C16 |
H163 |
101.5 |
109.4 |
| H162 |
C16 |
H163 |
108.5 |
109.5 |
| H171 |
C17 |
H172 |
108.4 |
109.5 |
| H171 |
C17 |
H173 |
101.6 |
109.5 |
| H172 |
C17 |
H173 |
108.4 |
109.5 |
Torsion Angles for K25
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C2 |
C3 |
BR1 |
186.8 |
180.0 |
| C3 |
C2 |
C5 |
C7 |
356.2 |
0.0 |
| C3 |
C2 |
C5 |
BR11 |
188.1 |
180.0 |
| C4 |
C3 |
C2 |
BR9 |
177.6 |
180.0 |
| C2 |
C3 |
C4 |
C8 |
359.9 |
-0.0 |
| C2 |
C3 |
C4 |
BR10 |
175.7 |
180.0 |
| C3 |
C2 |
C5 |
BR1 |
173.1 |
180.0 |
| C5 |
C2 |
C3 |
C4 |
1.9 |
-0.0 |
| C5 |
C2 |
C3 |
BR9 |
184.3 |
180.0 |
| C7 |
C5 |
C2 |
BR11 |
168.1 |
180.0 |
| C2 |
C5 |
C7 |
C8 |
3.9 |
359.9 |
| C2 |
C5 |
C7 |
N14 |
184.5 |
180.3 |
| C3 |
C2 |
BR1 |
C5 |
186.7 |
180.0 |
| BR1 |
C2 |
C3 |
C4 |
175.1 |
180.0 |
| BR1 |
C2 |
C3 |
BR9 |
357.5 |
0.0 |
| BR1 |
C2 |
C5 |
C7 |
183.1 |
180.0 |
| BR1 |
C2 |
C5 |
BR11 |
15.0 |
0.0 |
| C4 |
C3 |
C2 |
C5 |
1.9 |
-0.0 |
| C4 |
C3 |
C2 |
BR1 |
175.1 |
180.0 |
| C2 |
C3 |
C4 |
BR9 |
182.4 |
180.0 |
| C8 |
C4 |
C3 |
BR10 |
184.2 |
180.0 |
| C3 |
C4 |
C8 |
N6 |
179.2 |
180.0 |
| C3 |
C4 |
C8 |
C7 |
0.4 |
360.0 |
| BR9 |
C3 |
C2 |
C5 |
184.3 |
180.0 |
| BR9 |
C3 |
C2 |
BR1 |
357.5 |
0.0 |
| C2 |
C3 |
BR9 |
C4 |
177.6 |
180.0 |
| BR9 |
C3 |
C4 |
C8 |
177.5 |
180.0 |
| BR9 |
C3 |
C4 |
BR10 |
353.3 |
360.0 |
| C8 |
C4 |
C3 |
BR9 |
177.5 |
180.0 |
| C3 |
C4 |
C8 |
BR10 |
176.1 |
180.0 |
| C5 |
C7 |
C8 |
C4 |
357.7 |
0.1 |
| C4 |
C8 |
N6 |
C13 |
177.1 |
180.0 |
| C4 |
C8 |
N6 |
HN6 |
357.1 |
-0.0 |
| N6 |
C8 |
C4 |
C7 |
178.8 |
180.0 |
| C4 |
C8 |
C7 |
N14 |
177.2 |
179.8 |
| BR10 |
C4 |
C3 |
BR9 |
353.3 |
360.0 |
| C3 |
C4 |
BR10 |
C8 |
184.1 |
180.0 |
| BR10 |
C4 |
C8 |
N6 |
3.0 |
0.0 |
| BR10 |
C4 |
C8 |
C7 |
184.3 |
180.0 |
| C7 |
C5 |
C2 |
BR1 |
183.1 |
180.0 |
| C2 |
C5 |
C7 |
BR11 |
191.3 |
180.0 |
| C4 |
C8 |
C7 |
C5 |
357.7 |
0.1 |
| N6 |
C8 |
C7 |
C5 |
178.7 |
180.1 |
| C8 |
C7 |
C5 |
N14 |
179.4 |
179.6 |
| C5 |
C7 |
N14 |
C13 |
186.3 |
180.0 |
| BR11 |
C5 |
C2 |
BR1 |
15.0 |
0.0 |
| C2 |
C5 |
BR11 |
C7 |
168.3 |
180.0 |
| BR11 |
C5 |
C7 |
C8 |
172.5 |
179.9 |
| BR11 |
C5 |
C7 |
N14 |
353.2 |
0.3 |
| N6 |
C8 |
C4 |
BR10 |
3.0 |
0.0 |
| C4 |
C8 |
N6 |
C7 |
181.1 |
180.0 |
| C5 |
C7 |
C8 |
N6 |
178.7 |
180.1 |
| C13 |
N6 |
C8 |
HN6 |
180.0 |
180.0 |
| C8 |
N6 |
C13 |
N14 |
8.4 |
0.2 |
| C8 |
N6 |
C13 |
N15 |
178.2 |
179.9 |
| N6 |
C8 |
C7 |
N14 |
358.2 |
359.8 |
| C8 |
N6 |
C13 |
HN6 |
180.0 |
180.0 |
| C13 |
N6 |
C8 |
C7 |
356.0 |
0.0 |
| C7 |
N14 |
C13 |
N6 |
350.3 |
359.7 |
| N14 |
C13 |
N6 |
N15 |
190.2 |
180.2 |
| N6 |
C13 |
N15 |
C16 |
4.4 |
0.0 |
| N6 |
C13 |
N15 |
C17 |
181.8 |
180.0 |
| C8 |
N6 |
HN6 |
C13 |
180.0 |
180.0 |
| HN6 |
N6 |
C8 |
C7 |
176.1 |
180.0 |
| HN6 |
N6 |
C13 |
N14 |
188.3 |
180.2 |
| HN6 |
N6 |
C13 |
N15 |
358.1 |
359.9 |
| C7 |
C8 |
C4 |
BR10 |
184.3 |
180.0 |
| C4 |
C8 |
C7 |
N6 |
179.0 |
180.0 |
| C8 |
C7 |
C5 |
BR11 |
172.5 |
179.9 |
| C5 |
C7 |
C8 |
N14 |
180.5 |
180.3 |
| C7 |
C8 |
N6 |
C13 |
356.0 |
0.0 |
| C7 |
C8 |
N6 |
HN6 |
176.1 |
180.0 |
| C8 |
C7 |
N14 |
C13 |
6.9 |
0.4 |
| N14 |
C7 |
C5 |
BR11 |
353.2 |
0.3 |
| C5 |
C7 |
N14 |
C8 |
179.4 |
179.6 |
| N6 |
C13 |
N14 |
C7 |
350.3 |
359.7 |
| C7 |
N14 |
C13 |
N15 |
181.7 |
179.9 |
| N14 |
C13 |
N6 |
HN6 |
188.3 |
180.2 |
| N6 |
C13 |
N14 |
N15 |
168.6 |
179.8 |
| N14 |
C13 |
N15 |
C16 |
172.0 |
179.7 |
| N14 |
C13 |
N15 |
C17 |
349.4 |
359.7 |
| N15 |
C13 |
N6 |
HN6 |
358.1 |
359.9 |
| N6 |
C13 |
N15 |
N14 |
192.4 |
180.3 |
| C16 |
N15 |
C13 |
C17 |
182.5 |
180.0 |
| C13 |
N15 |
C16 |
H161 |
54.7 |
180.0 |
| C13 |
N15 |
C16 |
H162 |
180.0 |
300.0 |
| C13 |
N15 |
C16 |
H163 |
305.3 |
60.0 |
| C13 |
N15 |
C17 |
H171 |
54.7 |
270.0 |
| C13 |
N15 |
C17 |
H172 |
180.0 |
30.0 |
| C13 |
N15 |
C17 |
H173 |
305.3 |
150.0 |
| C13 |
N15 |
C16 |
C17 |
177.5 |
180.0 |
| C16 |
N15 |
C17 |
H171 |
232.2 |
90.0 |
| C16 |
N15 |
C17 |
H172 |
357.5 |
210.0 |
| C16 |
N15 |
C17 |
H173 |
122.7 |
329.9 |
| H161 |
C16 |
N15 |
H162 |
234.8 |
240.0 |
| H161 |
C16 |
N15 |
H163 |
109.5 |
120.0 |
| H162 |
C16 |
N15 |
H163 |
234.7 |
240.0 |
| C13 |
N15 |
C17 |
C16 |
182.5 |
180.0 |
| C17 |
N15 |
C16 |
H161 |
237.3 |
0.0 |
| C17 |
N15 |
C16 |
H162 |
2.5 |
120.0 |
| C17 |
N15 |
C16 |
H163 |
127.8 |
240.1 |
| H171 |
C17 |
N15 |
H172 |
234.7 |
240.0 |
| H171 |
C17 |
N15 |
H173 |
109.5 |
120.0 |
| H172 |
C17 |
N15 |
H173 |
234.8 |
240.0 |
| H161 |
C16 |
N15 |
C17 |
237.3 |
0.0 |
| N15 |
C16 |
H161 |
H162 |
131.7 |
120.0 |
| N15 |
C16 |
H161 |
H163 |
245.9 |
240.0 |
| H162 |
C16 |
H161 |
H163 |
114.1 |
120.1 |
| H162 |
C16 |
N15 |
C17 |
2.5 |
120.0 |
| N15 |
C16 |
H162 |
H161 |
234.7 |
240.0 |
| N15 |
C16 |
H162 |
H163 |
125.3 |
120.0 |
| H161 |
C16 |
H162 |
H163 |
250.6 |
240.0 |
| H163 |
C16 |
N15 |
C17 |
127.8 |
240.1 |
| N15 |
C16 |
H163 |
H161 |
114.2 |
120.0 |
| N15 |
C16 |
H163 |
H162 |
228.3 |
240.0 |
| H161 |
C16 |
H163 |
H162 |
114.1 |
120.0 |
| N15 |
C17 |
H171 |
H172 |
131.9 |
120.0 |
| N15 |
C17 |
H171 |
H173 |
246.0 |
240.0 |
| H172 |
C17 |
H171 |
H173 |
114.0 |
120.0 |
| N15 |
C17 |
H172 |
H171 |
234.7 |
240.0 |
| N15 |
C17 |
H172 |
H173 |
125.2 |
120.0 |
| H171 |
C17 |
H172 |
H173 |
250.5 |
240.0 |
| N15 |
C17 |
H173 |
H171 |
114.1 |
120.0 |
| N15 |
C17 |
H173 |
H172 |
228.1 |
240.0 |
| H171 |
C17 |
H173 |
H172 |
114.1 |
120.1 |