PDB Chemical Component K15

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for K15

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N6 C6 1.352 1.384
N1 C6 1.343 1.329
N1 C2 1.342 1.321
C6 C5 1.481 1.405
C2 N3 1.341 1.315
C5 C4 1.469 1.406
C5 N7 1.345 1.355
N3 C4 1.351 1.329
C4 N9 1.333 1.373
N7 C8 1.358 1.302
N CA 1.461 1.469
O C 1.246 1.208
N9 C8 1.346 1.363
N9 C1' 1.481 1.465
C1' O4' 1.421 1.444
C1' C2' 1.514 1.545
CA C 1.512 1.507
CA CB 1.532 1.530
C OXT 1.250 1.342
O4' C4' 1.433 1.444
CB CG 1.528 1.530
CG ND 1.477 1.469
C2' O2' 1.441 1.429
C2' C3' 1.517 1.545
C4' C5' 1.524 1.530
C4' C3' 1.518 1.545
C5' ND 1.475 1.469
ND CE 1.478 1.469
C3' O3' 1.434 1.429
CE C11 1.525 1.530
C11 C12 1.523 1.530
C12 C13 1.525 1.530
C14 C13 1.526 1.530
C14 C15 1.511 1.530
CA H1 1.100 1.091
N H2 1.000 1.009
N H3 1.000 1.009
CB H5 1.100 1.091
CB H6 1.100 1.089
CG H7 1.100 1.091
CG H8 1.100 1.090
CE H10 1.100 1.091
CE H11 1.100 1.090
C11 H12 1.100 1.090
C11 H13 1.100 1.090
C12 H14 1.100 1.090
C12 H15 1.100 1.090
C13 H16 1.100 1.090
C13 H17 1.100 1.090
C14 H18 1.100 1.089
C14 H19 1.100 1.090
C15 H20 1.100 1.090
C15 H21 1.100 1.090
C15 H22 1.100 1.090
C5' H23 1.100 1.090
C5' H24 1.100 1.090
C4' H25 1.099 1.090
C1' H26 1.100 1.090
C2' H27 1.100 1.090
O2' H28 0.949 0.967
C3' H29 1.100 1.090
O3' H30 0.950 0.966
C8 H31 1.080 1.079
N6 H32 1.000 0.970
N6 H33 1.000 0.970
C2 H34 1.080 1.080
OXT H35 0.950 0.967

Bond Angles for K15

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N1 C2 H34 117.9 118.7
C6 C5 C4 117.2 118.2
N7 C8 H31 124.3 125.0
N CA CB 109.8 109.5
N CA H1 109.2 109.5
O C OXT 121.8 120.0
N9 C8 H31 124.3 125.0
N9 C1' H26 110.1 110.4
C1' C2' O2' 107.3 110.5
C1' C2' C3' 103.8 104.1
C2' C1' H26 109.6 110.4
C1' C2' H27 110.4 110.5
CA C OXT 119.5 120.0
CA CB CG 112.9 109.5
CB CA H1 108.2 109.4
CA CB H5 108.6 109.5
CA CB H6 108.6 109.5
C OXT H35 109.5 117.0
O4' C4' C3' 106.9 104.8
O4' C4' H25 109.4 110.5
CB CG ND 110.3 109.5
CG CB H5 108.6 109.4
CG CB H6 108.6 109.5
CB CG H7 109.2 109.4
CB CG H8 109.3 109.5
CG ND CE 109.2 111.0
ND CG H7 109.3 109.5
ND CG H8 109.3 109.5
O2' C2' C3' 113.2 110.5
O2' C2' H27 111.5 110.5
C2' O2' H28 109.5 114.0
C4' C3' C2' 103.6 104.0
C2' C3' O3' 111.7 110.5
C3' C2' H27 110.3 110.6
C2' C3' H29 110.0 110.6
C4' C5' H23 110.4 109.5
C4' C5' H24 110.4 109.5
C4' C3' O3' 110.1 110.5
C3' C4' H25 108.3 110.3
C4' C3' H29 110.0 110.5
ND CE C11 113.7 109.5
ND CE H10 108.4 109.4
ND CE H11 108.4 109.5
O3' C3' H29 111.2 110.6
C3' O3' H30 109.5 114.0
CE C11 C12 110.4 109.5
C11 CE H10 108.4 109.4
C11 CE H11 108.4 109.5
CE C11 H12 109.2 109.5
CE C11 H13 109.3 109.5
C11 C12 C13 111.9 109.5
C12 C11 H12 109.2 109.5
C12 C11 H13 109.2 109.4
C11 C12 H14 108.9 109.5
C11 C12 H15 108.9 109.5
C13 C12 H14 108.8 109.5
C13 C12 H15 108.9 109.4
C12 C13 H16 108.5 109.5
C12 C13 H17 108.5 109.4
C14 C13 H16 108.5 109.5
C14 C13 H17 108.5 109.4
C15 C14 H18 109.3 109.5
C15 C14 H19 109.3 109.4
C14 C15 H20 109.5 109.4
C14 C15 H21 109.5 109.5
C14 C15 H22 109.5 109.5
H2 N H3 109.4 111.0
H5 CB H6 109.5 109.5
H7 CG H8 109.5 109.5
H10 CE H11 109.5 109.5
H12 C11 H13 109.5 109.5
H14 C12 H15 109.5 109.5
H16 C13 H17 109.5 109.5
H18 C14 H19 109.5 109.5
H20 C15 H21 109.5 109.4
H20 C15 H22 109.5 109.5
H21 C15 H22 109.5 109.5
H23 C5' H24 109.5 109.4
H32 N6 H33 109.5 120.0

Torsion Angles for K15

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N6 C6 C5 C4 180.0 180.0
C5 N7 C8 H31 180.6 180.0
C4 N9 C8 H31 178.8 180.2
C4 N9 C1' H26 317.2 327.3
N9 C8 N7 H31 180.0 180.0
N CA C OXT 179.0 161.8
N CA CB CG 283.4 294.3
CB CA N H1 118.5 119.9
N CA CB H5 44.0 54.2
N CA CB H6 162.9 174.2
CA C O OXT 179.7 180.3
O C OXT H35 360.0 354.9
N7 C8 N9 H31 180.0 180.0
C8 N9 C1' H26 133.4 147.7
C2' C1' N9 H26 123.3 122.3
N9 C1' C2' H27 330.7 24.0
C1' O4' C4' C3' 2.8 40.5
C1' O4' C4' H25 245.8 281.7
N9 C1' C2' H26 236.4 237.7
O2' C2' C1' C3' 120.1 118.7
O2' C2' C1' H27 238.3 237.4
C1' C2' O2' H28 180.0 180.0
C4' C3' C2' C1' 28.6 0.0
C1' C2' C3' O3' 147.0 118.6
C3' C2' C1' H27 118.3 118.8
C1' C2' C3' H29 271.0 241.4
O C CA OXT 180.3 179.7
CA C OXT H35 180.3 174.6
N CA CB H1 240.9 240.0
CB CA C OXT 300.8 281.9
CA CB CG ND 280.3 174.7
CG CB CA H5 239.5 240.1
CG CB CA H6 120.5 120.1
CA CB CG H7 40.4 294.7
CA CB CG H8 160.1 54.7
H5 CB CA H6 241.0 240.0
O4' C4' C3' C2' 340.0 336.0
O4' C4' C5' H23 200.4 305.2
O4' C4' C5' H24 321.5 185.3
O4' C4' C3' O3' 220.5 217.4
C3' C4' O4' H25 117.1 118.9
O4' C4' C3' H29 97.6 94.7
CG CB CA H1 42.6 54.2
CA CB CG H5 120.5 120.0
CA CB CG H6 239.5 239.9
CB CG ND CE 262.5 196.1
ND CG CB H7 239.9 240.0
ND CG CB H8 120.1 120.0
H5 CB CG H6 119.0 120.0
H7 CG CB H8 240.3 240.0
ND CG CB H5 159.8 54.8
ND CG CB H6 40.8 294.8
CB CG ND H7 120.1 120.0
CB CG ND H8 239.9 239.9
CG ND CE C11 262.8 66.0
CG ND CE H10 23.4 186.0
CG ND CE H11 142.2 306.0
H7 CG ND H8 119.8 120.0
C1' C2' O2' C3' 246.1 245.3
O2' C2' C1' H26 332.6 23.7
C1' C2' O2' H27 121.0 122.6
C4' C3' C2' O2' 272.6 241.4
O2' C2' C3' O3' 31.0 360.0
C3' C2' O2' H27 234.9 237.3
O2' C2' C3' H29 155.1 122.7
C1' C2' C3' O2' 116.0 118.6
C3' C2' C1' H26 212.6 265.1
C1' C2' C3' H27 241.7 241.3
O2' C2' C3' H27 125.7 122.6
C3' C2' O2' H28 294.0 294.7
C4' C3' C2' O3' 241.6 241.4
C2' C3' C4' H25 97.9 95.0
C4' C3' C2' H29 117.5 118.6
O3' C3' C2' H29 236.0 237.2
C2' C3' O3' H30 180.0 65.4
H23 C5' C4' H24 238.9 119.9
C1' C2' C3' C4' 28.6 0.0
O4' C4' C3' H25 242.2 241.0
O2' C2' C3' C4' 272.6 241.4
C2' C3' C4' O3' 119.6 118.6
C4' C3' C2' H27 146.9 118.7
C2' C3' C4' H29 242.4 241.3
C3' C4' C5' H23 320.3 60.6
C3' C4' C5' H24 81.4 300.7
O3' C3' C4' H29 122.9 122.7
C4' C3' O3' H30 294.5 180.0
C5' ND CG H7 18.6 312.1
C5' ND CG H8 258.9 192.1
C5' ND CE H10 146.6 310.0
C5' ND CE H11 265.4 69.9
CE ND CG H7 142.4 76.1
CE ND CG H8 22.6 316.1
ND CE C11 C12 160.8 179.9
C11 CE ND H10 239.4 240.0
C11 CE ND H11 120.6 120.1
ND CE C11 H12 281.0 299.9
ND CE C11 H13 40.7 60.0
H10 CE ND H11 241.2 240.0
C4' C3' O3' C2' 114.5 114.6
O3' C3' C2' H27 265.3 237.3
C2' C3' O3' H29 123.4 122.7
O3' C3' C4' H25 338.3 336.4
C4' C3' O3' H29 237.9 237.3
ND CE C11 H10 120.6 119.9
ND CE C11 H11 239.4 239.9
CE C11 C12 C13 138.7 180.0
C12 C11 CE H12 239.9 240.0
C12 C11 CE H13 120.2 119.9
CE C11 C12 H14 259.1 300.0
CE C11 C12 H15 18.3 60.0
H10 CE C11 H11 118.8 120.0
H12 C11 CE H13 240.3 239.9
C12 C11 CE H10 40.2 60.0
C12 C11 CE H11 281.4 300.0
CE C11 C12 H12 120.1 120.0
CE C11 C12 H13 239.8 240.0
C13 C12 C11 H14 239.6 240.0
C13 C12 C11 H15 120.4 119.9
C11 C12 C13 H16 192.4 300.1
C11 C12 C13 H17 311.3 60.1
H12 C11 C12 H13 119.7 120.1
H14 C12 C11 H15 240.7 240.0
C13 C12 C11 H12 18.6 60.0
C13 C12 C11 H13 258.9 299.9
C11 C12 C13 H14 120.4 120.0
C11 C12 C13 H15 239.6 240.0
C14 C13 C12 H16 239.4 239.9
C14 C13 C12 H17 120.6 119.9
H14 C12 C13 H15 119.2 120.0
H16 C13 C12 H17 241.1 240.0
C14 C13 C12 H14 311.5 60.0
C14 C13 C12 H15 192.3 300.0
C12 C13 C14 H16 120.6 120.1
C12 C13 C14 H17 239.5 240.1
H16 C13 C14 H17 118.9 120.0
C15 C14 C13 H16 79.1 59.9
C15 C14 C13 H17 320.2 299.9
H18 C14 C15 H19 119.9 120.0
H20 C15 C14 H21 240.0 240.1
H20 C15 C14 H22 120.0 120.0
H21 C15 C14 H22 240.0 240.0
N CA H1 CB 119.5 120.0
H1 CA C OXT 59.6 41.8
H1 CA CB CG 42.6 54.2
H1 CA CB H5 163.1 174.2
H1 CA CB H6 282.1 294.1
H2 N CA CB 57.4 176.0
H2 N CA H1 298.9 56.1
H3 N CA CB 177.4 299.9
H3 N CA H1 58.9 180.0
CA CB H5 CG 236.9 240.0
H5 CB CA H1 163.1 174.2
CA CB H5 H6 118.4 120.0
H5 CB CG ND 159.8 54.8
CG CB H5 H6 241.6 240.0
H5 CB CG H7 279.9 174.7
H5 CB CG H8 39.6 294.7
CA CB H6 CG 123.1 120.1
H6 CB CA H1 282.1 294.1
CA CB H6 H5 241.6 240.0
H6 CB CG ND 40.8 294.8
CG CB H6 H5 118.5 120.0
H6 CB CG H7 160.9 54.7
H6 CB CG H8 280.6 174.7
CB CG H7 ND 239.3 240.0
H7 CG CB H5 279.9 174.7
H7 CG CB H6 160.9 54.7
CB CG H7 H8 119.6 120.0
H7 CG ND CE 142.4 76.1
ND CG H7 H8 240.4 240.0
CB CG H8 ND 120.7 120.0
H8 CG CB H5 39.6 294.7
H8 CG CB H6 280.6 174.7
CB CG H8 H7 240.4 240.0
H8 CG ND CE 22.6 316.1
ND CG H8 H7 119.7 120.0
ND CE H10 C11 236.1 240.0
ND CE H10 H11 118.1 120.0
H10 CE C11 C12 40.2 60.0
C11 CE H10 H11 241.9 240.0
H10 CE C11 H12 160.3 180.0
H10 CE C11 H13 280.0 300.1
ND CE H11 C11 123.9 120.1
ND CE H11 H10 241.9 240.0
H11 CE C11 C12 281.4 300.0
C11 CE H11 H10 118.1 120.0
H11 CE C11 H12 41.6 60.0
H11 CE C11 H13 161.3 180.1
CE C11 H12 C12 239.1 240.0
H12 C11 CE H10 160.3 180.0
H12 C11 CE H11 41.6 60.0
CE C11 H12 H13 119.6 120.0
H12 C11 C12 C13 18.6 60.0
C12 C11 H12 H13 240.5 240.0
H12 C11 C12 H14 138.9 180.0
H12 C11 C12 H15 258.2 300.0
CE C11 H13 C12 120.9 119.9
H13 C11 CE H10 280.0 300.1
H13 C11 CE H11 161.3 180.1
CE C11 H13 H12 240.4 240.0
H13 C11 C12 C13 258.9 299.9
C12 C11 H13 H12 119.5 120.0
H13 C11 C12 H14 19.3 59.9
H13 C11 C12 H15 138.5 180.0
C11 C12 H14 C13 237.8 240.0
H14 C12 C11 H12 138.9 180.0
H14 C12 C11 H13 19.3 59.9
C11 C12 H14 H15 118.9 120.0
C13 C12 H14 H15 241.1 240.0
H14 C12 C13 H16 72.1 180.0
H14 C12 C13 H17 190.9 300.1
C11 C12 H15 C13 122.3 120.0
H15 C12 C11 H12 258.2 300.0
H15 C12 C11 H13 138.5 180.0
C11 C12 H15 H14 241.1 240.0
C13 C12 H15 H14 118.9 120.0
H15 C12 C13 H16 312.8 60.0
H15 C12 C13 H17 71.7 180.1
H16 C13 C12 H14 72.1 180.0
H16 C13 C12 H15 312.8 60.0
C12 C13 H16 H17 118.2 120.0
C14 C13 H16 H17 241.7 240.0
H17 C13 C12 H14 190.9 300.1
H17 C13 C12 H15 71.7 180.1
C12 C13 H17 H16 241.7 240.0
C14 C13 H17 H16 118.3 120.0
H18 C14 C13 H16 199.2 179.9
H18 C14 C13 H17 80.3 59.9
C15 C14 H18 H19 240.2 240.1
H18 C14 C15 H20 59.9 300.0
H18 C14 C15 H21 179.9 60.0
H18 C14 C15 H22 299.9 180.0
H19 C14 C13 H16 319.0 300.0
H19 C14 C13 H17 200.1 180.0
C15 C14 H19 H18 119.8 120.0
H19 C14 C15 H20 300.1 180.1
H19 C14 C15 H21 60.0 300.0
H19 C14 C15 H22 180.1 60.0
H20 C15 C14 H18 59.9 300.0
H20 C15 C14 H19 300.1 180.1
C14 C15 H20 H21 120.0 120.0
C14 C15 H20 H22 240.0 240.0
H21 C15 H20 H22 120.0 120.0
H21 C15 C14 H18 179.9 60.0
H21 C15 C14 H19 60.0 300.0
C14 C15 H21 H20 240.0 240.1
C14 C15 H21 H22 120.0 120.1
H20 C15 H21 H22 240.0 240.0
H22 C15 C14 H18 299.9 180.0
H22 C15 C14 H19 180.1 60.0
C14 C15 H22 H20 120.0 120.0
C14 C15 H22 H21 240.0 240.0
H20 C15 H22 H21 120.0 120.0
C4' C5' H23 H24 121.6 240.0
C4' C5' H24 H23 238.4 120.0
O4' C4' H25 C3' 116.2 115.4
H25 C4' C3' C2' 97.9 95.0
H25 C4' C5' H23 81.4 182.8
H25 C4' C5' H24 202.5 62.9
H25 C4' C3' O3' 338.3 336.4
H25 C4' C3' H29 215.4 213.6
H26 C1' C2' O2' 332.6 23.7
H26 C1' C2' C3' 212.6 265.1
H26 C1' C2' H27 94.3 146.3
C1' C2' H27 O2' 240.9 237.4
C1' C2' H27 C3' 114.2 114.7
H27 C2' C1' H26 94.3 146.3
O2' C2' H27 C3' 233.4 237.3
H27 C2' O2' H28 59.0 57.4
H27 C2' C3' O3' 265.3 237.3
H27 C2' C3' H29 29.4 0.1
H28 O2' C2' C3' 294.0 294.7
H28 O2' C2' H27 59.0 57.4
C4' C3' H29 C2' 246.5 245.4
C2' C3' H29 O3' 235.7 237.3
H29 C3' C2' H27 29.4 0.1
C4' C3' H29 O3' 122.2 122.7
H29 C3' C4' H25 215.4 213.6
H29 C3' O3' H30 56.7 302.7
H30 O3' C3' H29 56.7 302.7