PDB Chemical Component K03

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for K03

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O12 C11 1.209 1.229
C11 C13 1.498 1.473
C13 S17 1.797 1.690
S17 C16 1.780 1.713
C16 C15 1.396 1.377
C13 C14 1.387 1.349
C15 C14 1.399 1.426
C11 N10 1.345 1.427
N10 C9 1.371 1.368
C9 S18 1.777 1.712
S18 C19 1.782 1.703
C19 C26 1.396 1.382
C26 C25 1.516 1.500
C25 C22 1.552 1.555
C22 C24 1.526 1.542
C22 C23 1.515 1.540
C22 C21 1.542 1.556
C19 C20 1.510 1.494
C21 C20 1.546 1.538
C9 C8 1.396 1.379
C26 C8 1.428 1.427
C8 C6 1.508 1.443
C6 O7 1.226 1.243
C6 N3 1.341 1.412
N3 C4 1.459 1.456
C4 C5 1.512 1.490
N3 C2 1.470 1.462
C2 C1 1.512 1.491
N10 H10 1.000 1.039
C14 H14 1.080 1.082
C16 H16 1.080 1.081
C15 H15 1.080 1.083
C20 H201 1.100 1.096
C20 H202 1.100 1.097
C25 H251 1.100 1.098
C25 H252 1.100 1.099
C24 H241 1.100 1.094
C24 H242 1.100 1.094
C24 H243 1.100 1.094
C23 H231 1.100 1.094
C23 H232 1.100 1.095
C23 H233 1.100 1.094
C21 H211 1.100 1.099
C21 H212 1.100 1.096
C4 H4C1 1.100 1.094
C4 H4C2 1.100 1.095
C2 H2C1 1.100 1.094
C2 H2C2 1.100 1.093
C5 H5C1 1.100 1.096
C5 H5C2 1.100 1.095
C5 H5C3 1.100 1.096
C1 H1C1 1.100 1.096
C1 H1C2 1.100 1.094
C1 H1C3 1.100 1.097

Bond Angles for K03

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O12 C11 C13 119.3 121.0
O12 C11 N10 121.6 123.0
C11 C13 S17 119.6 117.8
C11 C13 C14 131.3 127.3
C13 C11 N10 119.1 116.0
C13 S17 C16 93.1 90.4
S17 C13 C14 109.1 115.0
S17 C16 C15 106.8 112.0
S17 C16 H16 126.6 120.3
C16 C15 C14 117.7 112.1
C15 C16 H16 126.6 127.7
C16 C15 H15 121.1 123.3
C13 C14 C15 113.2 110.5
C13 C14 H14 123.4 125.2
C15 C14 H14 123.4 124.3
C14 C15 H15 121.1 124.6
C11 N10 C9 121.8 129.3
C11 N10 H10 119.1 115.3
N10 C9 S18 123.4 116.6
N10 C9 C8 124.7 131.4
C9 N10 H10 119.1 115.4
C9 S18 C19 90.1 91.8
S18 C9 C8 111.8 112.0
S18 C19 C26 112.0 112.7
S18 C19 C20 118.4 122.1
C19 C26 C25 119.1 122.5
C26 C19 C20 129.6 125.2
C19 C26 C8 112.7 111.3
C26 C25 C22 112.1 112.8
C25 C26 C8 128.2 126.2
C26 C25 H251 108.6 110.0
C26 C25 H252 108.0 107.4
C25 C22 C24 110.8 110.3
C25 C22 C23 106.5 108.8
C25 C22 C21 112.5 110.1
C22 C25 H251 108.6 110.1
C22 C25 H252 108.0 109.4
C24 C22 C23 106.0 108.1
C24 C22 C21 109.7 110.7
C22 C24 H241 109.5 110.6
C22 C24 H242 109.5 110.6
C22 C24 H243 109.4 110.5
C23 C22 C21 111.0 108.8
C22 C23 H231 109.5 110.6
C22 C23 H232 109.5 110.6
C22 C23 H233 109.5 110.6
C22 C21 C20 113.5 113.7
C22 C21 H211 108.2 108.6
C22 C21 H212 107.2 110.3
C19 C20 C21 107.9 110.6
C19 C20 H201 110.0 111.0
C19 C20 H202 110.4 109.0
C21 C20 H201 110.0 109.3
C21 C20 H202 110.3 109.4
C20 C21 H211 108.2 108.5
C20 C21 H212 107.3 109.1
C9 C8 C26 113.3 112.2
C9 C8 C6 122.3 122.3
C26 C8 C6 124.3 125.5
C8 C6 O7 117.3 117.4
C8 C6 N3 125.1 119.4
O7 C6 N3 117.6 123.2
C6 N3 C4 125.7 122.2
C6 N3 C2 118.2 122.2
N3 C4 C5 110.4 111.1
C4 N3 C2 116.1 115.6
N3 C4 H4C1 109.2 107.8
N3 C4 H4C2 109.0 107.7
C5 C4 H4C1 109.2 110.5
C5 C4 H4C2 109.0 110.8
C4 C5 H5C1 109.5 110.9
C4 C5 H5C2 109.5 110.9
C4 C5 H5C3 109.4 109.8
N3 C2 C1 113.6 111.1
N3 C2 H2C1 108.1 107.8
N3 C2 H2C2 107.2 107.7
C1 C2 H2C1 108.1 110.5
C1 C2 H2C2 107.2 110.8
C2 C1 H1C1 109.5 110.9
C2 C1 H1C2 109.5 110.9
C2 C1 H1C3 109.5 109.8
H201 C20 H202 108.3 107.4
H251 C25 H252 111.6 106.9
H241 C24 H242 109.4 108.4
H241 C24 H243 109.5 108.3
H242 C24 H243 109.5 108.3
H231 C23 H232 109.5 108.3
H231 C23 H233 109.4 108.4
H232 C23 H233 109.5 108.4
H211 C21 H212 112.6 106.3
H4C1 C4 H4C2 110.2 108.8
H2C1 C2 H2C2 112.8 108.8
H5C1 C5 H5C2 109.5 109.2
H5C1 C5 H5C3 109.5 107.9
H5C2 C5 H5C3 109.5 108.0
H1C1 C1 H1C2 109.4 109.3
H1C1 C1 H1C3 109.5 107.8
H1C2 C1 H1C3 109.5 108.0

Torsion Angles for K03

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O12 C11 C13 S17 10.7 181.7
O12 C11 C13 C14 190.1 1.7
C13 C11 O12 N10 180.0 178.2
O12 C11 N10 C9 6.1 0.1
O12 C11 N10 H10 186.1 180.0
O12 C11 C13 N10 180.0 181.7
C11 C13 S17 C16 179.4 180.0
S17 C13 C11 C14 180.6 180.0
C11 C13 C14 C15 180.8 180.0
C11 C13 C14 H14 0.8 0.0
C13 C11 N10 C9 186.1 181.8
C13 C11 N10 H10 6.1 1.7
C11 C13 S17 C14 179.5 180.0
S17 C13 C11 N10 190.7 0.0
C13 S17 C16 C15 359.9 0.0
C13 S17 C16 H16 179.9 180.0
S17 C13 C14 C15 0.2 0.0
S17 C13 C14 H14 180.2 180.0
C16 S17 C13 C14 359.9 360.0
S17 C16 C15 C14 0.2 360.0
C15 C16 S17 H16 180.0 180.0
S17 C16 C15 H15 180.3 180.0
S17 C16 C15 H16 180.0 180.0
C13 C14 C15 C16 359.7 360.0
C16 C15 C14 H14 179.7 180.0
C14 C15 C16 H15 180.0 180.0
C11 C13 C14 S17 180.6 180.0
C14 C13 C11 N10 10.1 180.0
C14 C13 S17 C16 359.9 360.0
C16 C15 C14 C13 359.7 360.0
C15 C14 C13 H14 180.0 180.0
C13 C14 C15 H15 179.7 180.0
C14 C15 C16 H16 180.2 180.0
C16 C15 C14 H15 180.0 180.0
C13 C14 C15 H14 180.0 180.0
O12 C11 N10 C13 180.0 178.3
N10 C11 C13 S17 190.7 0.0
N10 C11 C13 C14 10.1 180.0
C11 N10 C9 S18 53.9 359.9
C11 N10 C9 C8 235.8 180.0
C9 N10 C11 H10 180.0 180.1
C11 N10 C9 H10 180.0 179.9
N10 C9 S18 C19 180.7 180.2
S18 C9 N10 C8 178.1 179.9
N10 C9 C8 C26 179.7 180.0
N10 C9 C8 C6 357.4 0.2
N10 C9 S18 C8 181.7 180.1
S18 C9 N10 H10 233.9 180.0
C9 S18 C19 C26 0.3 359.7
C9 S18 C19 C20 180.0 181.4
S18 C9 C8 C26 1.5 0.0
S18 C9 C8 C6 179.1 180.2
C19 S18 C9 C8 359.0 0.1
S18 C19 C26 C25 179.3 179.2
C26 C19 S18 C20 180.3 178.3
S18 C19 C26 C8 0.5 0.4
S18 C19 C20 C21 167.9 193.3
S18 C19 C20 H201 287.9 314.9
S18 C19 C20 H202 47.2 73.0
S18 C19 C26 C20 179.6 181.8
C19 C26 C25 C22 344.7 17.1
C25 C26 C19 C8 178.8 178.8
C19 C26 C25 H251 104.7 140.5
C19 C26 C25 H252 225.8 256.5
C26 C19 C20 C21 347.5 15.2
C26 C19 C20 H201 107.5 136.8
C26 C19 C20 H202 226.9 254.9
C9 C8 C26 C19 358.7 359.8
C19 C26 C8 C6 181.1 179.5
C25 C26 C19 C20 359.7 357.4
C19 C26 C25 C8 181.4 181.3
C26 C25 C22 C24 280.9 79.3
C26 C25 C22 C23 166.0 197.7
C26 C25 C22 C21 44.2 316.8
C22 C25 C26 H251 240.0 236.7
C22 C25 C26 H252 118.9 120.7
C9 C8 C26 C25 180.1 181.0
C25 C26 C8 C6 2.5 0.7
H251 C25 C26 H252 238.9 244.0
C22 C25 C26 C8 163.3 195.8
C26 C25 C22 H251 120.0 123.3
C26 C25 C22 H252 241.1 240.5
C24 C22 C25 C23 114.9 241.6
C24 C22 C25 C21 236.7 122.4
C25 C22 C24 H241 185.1 164.8
C25 C22 C24 H242 305.1 284.9
C25 C22 C24 H243 65.1 44.9
C23 C22 C25 C21 121.8 240.8
C25 C22 C23 H231 0.0 100.9
C25 C22 C23 H232 120.1 220.8
C25 C22 C23 H233 240.1 340.9
C25 C22 C21 C20 300.0 58.4
C25 C22 C21 H211 60.0 297.4
C25 C22 C21 H212 181.7 181.3
H251 C25 C22 H252 121.1 117.2
C25 C22 C24 C23 244.8 118.9
C25 C22 C24 C21 124.9 237.9
C24 C22 C25 H251 160.9 316.0
C24 C22 C25 H252 39.8 198.8
C23 C22 C24 C21 240.1 119.1
C24 C22 C23 H231 241.9 220.7
C24 C22 C23 H232 1.9 340.7
C24 C22 C23 H233 121.9 100.7
C24 C22 C21 C20 63.9 296.1
C24 C22 C21 H211 183.9 175.2
C24 C22 C21 H212 305.6 59.1
H241 C24 C22 H242 240.0 240.0
H241 C24 C22 H243 120.0 120.0
H242 C24 C22 H243 240.0 240.0
C25 C22 C23 C24 118.1 240.2
C25 C22 C23 C21 237.2 119.9
C23 C22 C25 H251 46.0 74.4
C23 C22 C25 H252 284.9 317.2
C24 C22 C23 C21 119.1 239.8
C23 C22 C24 H241 300.3 46.0
C23 C22 C24 H242 60.3 166.0
C23 C22 C24 H243 180.3 286.0
C23 C22 C21 C20 180.7 177.5
C23 C22 C21 H211 300.7 56.6
C23 C22 C21 H212 62.5 300.5
H231 C23 C22 H232 240.0 240.1
H231 C23 C22 H233 120.0 120.0
H232 C23 C22 H233 240.0 240.0
C25 C22 C21 C24 236.1 122.2
C25 C22 C21 C23 119.3 240.8
C21 C22 C25 H251 284.2 193.5
C21 C22 C25 H252 163.1 76.3
C24 C22 C21 C23 243.2 118.6
C21 C22 C24 H241 60.2 286.9
C21 C22 C24 H242 180.2 47.0
C21 C22 C24 H243 300.2 167.0
C21 C22 C23 H231 122.8 340.9
C21 C22 C23 H232 242.9 100.9
C21 C22 C23 H233 2.9 220.9
C19 C20 C21 C22 41.3 317.0
C22 C21 C20 H201 281.3 194.4
C22 C21 C20 H202 161.9 77.1
C20 C21 C22 H211 240.0 120.9
C20 C21 C22 H212 118.3 237.0
H211 C21 C22 H212 238.3 116.1
S18 C19 C20 C26 180.4 178.1
C20 C19 C26 C25 359.7 357.4
C20 C19 C26 C8 180.9 178.6
C22 C21 C20 C19 41.3 317.0
C21 C20 C19 H201 240.0 238.5
C21 C20 C19 H202 120.6 120.3
C19 C20 C21 H211 281.2 78.0
C19 C20 C21 H212 159.5 193.4
H201 C20 C19 H202 240.6 241.9
C22 C21 C20 H211 120.0 239.0
C22 C21 C20 H212 241.8 123.6
C19 C20 C21 H201 120.0 122.6
C19 C20 C21 H202 239.4 239.9
H201 C20 C21 H202 119.4 117.3
H211 C21 C20 H212 121.7 244.6
N10 C9 C8 S18 178.3 179.9
C8 C9 N10 H10 55.8 0.1
C8 C9 S18 C19 359.0 0.1
C19 C26 C8 C9 358.7 359.8
C25 C26 C8 C9 180.1 181.0
C26 C8 C9 C6 182.4 179.8
C9 C8 C6 O7 245.0 89.1
C9 C8 C6 N3 61.8 269.7
C19 C26 C8 C25 178.7 178.8
C8 C26 C19 C20 180.9 178.6
C8 C26 C25 C22 163.3 195.8
C8 C26 C25 H251 283.3 319.1
C8 C26 C25 H252 44.4 75.1
C9 C8 C26 C6 177.6 180.2
C26 C8 C6 O7 62.4 269.3
C26 C8 C6 N3 239.2 90.0
C9 C8 C6 C26 182.6 179.8
O7 C6 C8 N3 183.2 179.3
C8 C6 N3 C4 8.8 179.3
C8 C6 N3 C2 190.3 359.3
C8 C6 O7 N3 177.1 180.7
O7 C6 N3 C4 185.6 360.0
O7 C6 N3 C2 7.1 180.0
C8 C6 N3 O7 183.2 179.3
C6 N3 C4 C5 99.3 90.0
C4 N3 C6 C2 178.5 180.0
C6 N3 C4 H4C1 219.3 211.3
C6 N3 C4 H4C2 339.6 328.5
C6 N3 C2 C1 129.2 90.0
C6 N3 C2 H2C1 249.1 211.2
C6 N3 C2 H2C2 11.0 328.4
C6 N3 C4 C2 181.4 180.0
C5 C4 N3 H4C1 240.0 238.7
C5 C4 N3 H4C2 119.6 121.5
N3 C4 C5 H5C1 71.3 298.6
N3 C4 C5 H5C2 191.3 60.2
N3 C4 C5 H5C3 311.3 179.5
C4 N3 C2 C1 310.5 270.0
C4 N3 C2 H2C1 70.5 31.2
C4 N3 C2 H2C2 192.3 148.5
H4C1 C4 N3 H4C2 239.7 242.8
C5 C4 N3 C2 277.8 270.0
N3 C4 C5 H4C1 120.0 119.6
N3 C4 C5 H4C2 240.4 240.3
H4C1 C4 C5 H4C2 120.4 120.7
H5C1 C5 C4 H5C2 240.0 238.5
H5C1 C5 C4 H5C3 120.0 119.2
H5C2 C5 C4 H5C3 240.0 240.7
C6 N3 C2 C4 178.7 180.0
C2 N3 C4 C5 277.8 270.0
C2 N3 C4 H4C1 37.9 31.3
C2 N3 C4 H4C2 158.2 148.5
C1 C2 N3 H2C1 240.0 238.8
C1 C2 N3 H2C2 118.2 121.6
N3 C2 C1 H1C1 26.8 298.6
N3 C2 C1 H1C2 146.8 60.2
N3 C2 C1 H1C3 266.8 179.5
H2C1 C2 N3 H2C2 238.2 242.8
N3 C2 C1 H2C1 120.0 119.6
N3 C2 C1 H2C2 241.8 240.3
H2C1 C2 C1 H2C2 121.8 120.6
H1C1 C1 C2 H1C2 240.0 238.4
H1C1 C1 C2 H1C3 120.0 119.1
H1C2 C1 C2 H1C3 240.0 240.7
C11 N10 H10 C9 180.0 180.1
H10 N10 C9 S18 233.9 180.0
H10 N10 C9 C8 55.8 0.1
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 H15 359.7 0.0
S17 C16 H16 C15 180.0 180.0
H16 C16 C15 C14 180.2 180.0
H16 C16 C15 H15 0.3 360.0
C16 C15 H15 C14 180.0 180.0
H15 C15 C16 H16 0.3 360.0
H15 C15 C14 H14 359.7 0.0
C19 C20 H201 C21 241.3 237.7
C19 C20 H201 H202 120.6 119.1
C21 C20 H201 H202 239.4 241.4
H201 C20 C21 H211 161.2 315.4
H201 C20 C21 H212 39.5 70.8
C19 C20 H202 C21 119.2 121.1
C19 C20 H202 H201 239.6 239.6
C21 C20 H202 H201 120.4 118.5
H202 C20 C21 H211 41.9 198.0
H202 C20 C21 H212 280.1 313.4
C26 C25 H251 C22 237.8 235.1
H251 C25 C26 C8 283.3 319.1
C26 C25 H251 H252 118.9 116.3
H251 C25 C22 C24 160.9 316.0
H251 C25 C22 C23 46.0 74.4
H251 C25 C22 C21 284.2 193.5
C22 C25 H251 H252 241.1 241.3
C26 C25 H252 C22 121.5 122.8
H252 C25 C26 C8 44.4 75.1
C26 C25 H252 H251 240.8 242.0
H252 C25 C22 C24 39.8 198.8
H252 C25 C22 C23 284.9 317.2
H252 C25 C22 C21 163.1 76.3
C22 C25 H252 H251 119.3 119.2
H241 C24 C22 C23 300.3 46.0
H241 C24 C22 C21 60.2 286.9
C22 C24 H241 H242 120.0 121.4
C22 C24 H241 H243 240.0 238.7
H242 C24 H241 H243 120.0 117.4
H242 C24 C22 C23 60.3 166.0
H242 C24 C22 C21 180.2 47.0
C22 C24 H242 H241 240.0 238.7
C22 C24 H242 H243 120.0 121.3
H241 C24 H242 H243 240.0 242.6
H243 C24 C22 C23 180.3 286.0
H243 C24 C22 C21 300.2 167.0
C22 C24 H243 H241 120.0 121.3
C22 C24 H243 H242 240.0 238.7
H241 C24 H243 H242 120.0 117.4
H231 C23 C22 C21 122.8 340.9
C22 C23 H231 H232 120.0 121.3
C22 C23 H231 H233 240.0 238.7
H232 C23 H231 H233 120.0 117.4
H232 C23 C22 C21 242.9 100.9
C22 C23 H232 H231 240.0 238.7
C22 C23 H232 H233 120.0 121.3
H231 C23 H232 H233 240.0 242.6
H233 C23 C22 C21 2.9 220.9
C22 C23 H233 H231 120.0 121.3
C22 C23 H233 H232 240.0 238.7
H231 C23 H233 H232 120.0 117.4
C22 C21 H211 C20 236.7 124.1
C22 C21 H211 H212 118.3 241.3
H211 C21 C20 H201 161.2 315.4
H211 C21 C20 H202 41.9 198.0
C20 C21 H211 H212 241.6 117.2
C22 C21 H212 C20 122.2 234.4
C22 C21 H212 H211 241.1 117.5
H212 C21 C20 H201 39.5 70.8
H212 C21 C20 H202 280.1 313.4
C20 C21 H212 H211 118.9 243.2
N3 C4 H4C1 C5 239.2 238.4
H4C1 C4 N3 C2 37.9 31.3
N3 C4 H4C1 H4C2 119.6 116.5
C5 C4 H4C1 H4C2 240.4 238.1
H4C1 C4 C5 H5C1 311.3 179.0
H4C1 C4 C5 H5C2 71.3 300.6
H4C1 C4 C5 H5C3 191.3 59.8
N3 C4 H4C2 C5 120.5 121.7
H4C2 C4 N3 C2 158.2 148.5
N3 C4 H4C2 H4C1 240.3 243.5
C5 C4 H4C2 H4C1 119.8 121.7
H4C2 C4 C5 H5C1 190.9 58.3
H4C2 C4 C5 H5C2 310.9 179.9
H4C2 C4 C5 H5C3 70.9 299.2
N3 C2 H2C1 C1 236.6 238.4
N3 C2 H2C1 H2C2 118.3 116.6
C1 C2 H2C1 H2C2 241.7 238.2
H2C1 C2 C1 H1C1 266.8 179.0
H2C1 C2 C1 H1C2 26.8 300.6
H2C1 C2 C1 H1C3 146.8 59.9
N3 C2 H2C2 C1 122.3 121.8
N3 C2 H2C2 H2C1 241.2 243.4
C1 C2 H2C2 H2C1 118.8 121.6
H2C2 C2 C1 H1C1 145.0 58.3
H2C2 C2 C1 H1C2 265.0 179.9
H2C2 C2 C1 H1C3 25.0 299.2
H5C1 C5 C4 H4C1 311.3 179.0
H5C1 C5 C4 H4C2 190.9 58.3
C4 C5 H5C1 H5C2 120.0 122.5
C4 C5 H5C1 H5C3 240.0 239.7
H5C2 C5 H5C1 H5C3 120.0 117.1
H5C2 C5 C4 H4C1 71.3 300.6
H5C2 C5 C4 H4C2 310.9 179.9
C4 C5 H5C2 H5C1 240.0 237.5
C4 C5 H5C2 H5C3 120.0 120.4
H5C1 C5 H5C2 H5C3 240.0 242.9
H5C3 C5 C4 H4C1 191.3 59.8
H5C3 C5 C4 H4C2 70.9 299.2
C4 C5 H5C3 H5C1 120.0 121.0
C4 C5 H5C3 H5C2 240.0 238.9
H5C1 C5 H5C3 H5C2 120.0 117.9
H1C1 C1 C2 H2C1 266.8 179.0
H1C1 C1 C2 H2C2 145.0 58.3
C2 C1 H1C1 H1C2 120.0 122.6
C2 C1 H1C1 H1C3 240.0 239.7
H1C2 C1 H1C1 H1C3 120.0 117.2
H1C2 C1 C2 H2C1 26.8 300.6
H1C2 C1 C2 H2C2 265.0 179.9
C2 C1 H1C2 H1C1 240.0 237.4
C2 C1 H1C2 H1C3 120.0 120.4
H1C1 C1 H1C2 H1C3 240.0 242.9
H1C3 C1 C2 H2C1 146.8 59.9
H1C3 C1 C2 H2C2 25.0 299.2
C2 C1 H1C3 H1C1 120.1 120.9
C2 C1 H1C3 H1C2 240.0 239.0
H1C1 C1 H1C3 H1C2 119.9 118.0