PDB Chemical Component K01

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for K01

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O21 C15 1.171 1.217
C15 C16 1.481 1.465
C15 N14 1.283 1.349
C16 C20 1.398 1.367
C16 S17 1.723 1.758
S17 C18 1.730 1.706
C18 C19 1.391 1.339
C18 H18 1.080 1.080
C19 C20 1.409 1.375
C19 H19 1.080 1.081
C20 H20 1.080 1.080
N14 C13 1.369 1.385
N14 HN14 1.000 0.970
C13 C5 1.400 1.367
C13 S12 1.710 1.702
S12 C7 1.743 1.756
C7 C6 1.395 1.338
C7 C8 1.503 1.517
C6 C5 1.403 1.451
C6 C11 1.523 1.520
C11 C10 1.554 1.530
C11 H111 1.100 1.091
C11 H112 1.100 1.090
C10 C9 1.560 1.532
C10 H101 1.100 1.090
C10 H102 1.100 1.089
C9 C8 1.552 1.531
C9 H91 1.100 1.090
C9 H92 1.100 1.089
C8 H81 1.100 1.090
C8 H82 1.100 1.090
C5 C4 1.517 1.466
C4 N3 1.305 1.348
C4 O22 1.136 1.218
N3 C23 1.435 1.465
N3 C2 1.307 1.464
C2 C1 1.720 1.530
C2 H21 1.100 1.090
C2 H22 1.100 1.090
C1 H11 1.100 1.091
C1 H12 1.100 1.090
C1 H13 1.100 1.089
C23 C24 1.506 1.530
C23 H231 1.100 1.090
C23 H232 1.100 1.090
C24 H241 1.100 1.090
C24 H242 1.100 1.091
C24 H243 1.100 1.091

Bond Angles for K01

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O21 C15 C16 127.2 120.0
O21 C15 N14 115.5 120.0
C16 C15 N14 116.8 120.0
C15 C16 C20 133.3 125.4
C15 C16 S17 112.2 125.5
C15 N14 C13 130.9 120.0
C15 N14 HN14 114.6 120.0
S17 C16 C20 114.4 109.1
C16 C20 C19 107.9 113.3
C16 C20 H20 126.1 123.4
C16 S17 C18 91.4 91.6
S17 C18 C19 109.3 110.9
S17 C18 H18 125.4 124.6
C19 C18 H18 125.3 124.5
C18 C19 C20 117.0 115.1
C18 C19 H19 121.5 122.4
C20 C19 H19 121.5 122.5
C19 C20 H20 126.1 123.4
C13 N14 HN14 114.6 120.1
N14 C13 C5 123.9 124.6
N14 C13 S12 122.1 124.7
S12 C13 C5 113.4 110.7
C13 C5 C6 111.7 113.4
C13 C5 C4 129.7 123.3
C13 S12 C7 90.4 92.7
S12 C7 C6 112.2 110.8
S12 C7 C8 119.5 124.9
C6 C7 C8 128.3 124.3
C7 C6 C5 112.3 112.4
C7 C6 C11 121.2 123.5
C7 C8 C9 102.6 108.8
C7 C8 H81 111.8 109.6
C7 C8 H82 113.3 109.6
C11 C6 C5 126.5 124.1
C6 C5 C4 118.1 123.3
C6 C11 C10 110.4 108.8
C6 C11 H111 109.1 109.6
C6 C11 H112 108.9 109.6
C10 C11 H111 109.2 109.6
C10 C11 H112 109.0 109.6
C11 C10 C9 118.8 109.2
C11 C10 H101 106.5 109.5
C11 C10 H102 104.3 109.6
H111 C11 H112 110.2 109.7
C9 C10 H101 106.5 109.5
C9 C10 H102 104.3 109.5
C10 C9 C8 113.1 109.0
C10 C9 H91 108.3 109.5
C10 C9 H92 107.4 109.5
H101 C10 H102 117.1 109.6
C8 C9 H91 108.3 109.5
C8 C9 H92 107.4 109.6
C9 C8 H81 111.8 109.6
C9 C8 H82 113.3 109.6
H91 C9 H92 112.3 109.7
H81 C8 H82 104.3 109.7
C5 C4 N3 137.9 120.0
C5 C4 O22 122.8 120.0
O22 C4 N3 97.4 120.0
C4 N3 C23 151.9 120.0
C4 N3 C2 93.8 120.0
C2 N3 C23 113.3 120.0
N3 C23 C24 101.3 109.5
N3 C23 H231 112.3 109.4
N3 C23 H232 114.0 109.4
N3 C2 C1 94.2 109.5
N3 C2 H21 114.9 109.5
N3 C2 H22 117.9 109.5
C1 C2 H21 114.9 109.5
C1 C2 H22 117.9 109.4
C2 C1 H11 109.5 109.4
C2 C1 H12 109.5 109.5
C2 C1 H13 109.4 109.5
H21 C2 H22 98.4 109.5
H11 C1 H12 109.5 109.5
H11 C1 H13 109.5 109.5
H12 C1 H13 109.5 109.5
C24 C23 H231 112.3 109.5
C24 C23 H232 114.0 109.5
C23 C24 H241 109.5 109.5
C23 C24 H242 109.4 109.5
C23 C24 H243 109.5 109.5
H231 C23 H232 103.4 109.5
H241 C24 H242 109.5 109.5
H241 C24 H243 109.5 109.5
H242 C24 H243 109.5 109.4

Torsion Angles for K01

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C16 C15 O21 N14 188.3 180.3
O21 C15 C16 C20 180.0 359.9
O21 C15 C16 S17 359.4 180.3
O21 C15 N14 C13 8.3 0.0
O21 C15 N14 HN14 188.4 180.0
O21 C15 C16 N14 171.6 179.7
C16 C15 N14 C13 180.9 179.7
C16 C15 N14 HN14 1.0 359.6
S17 C16 C15 C20 179.3 180.4
C15 C16 C20 C19 178.1 179.8
C15 C16 C20 H20 358.1 0.1
C15 C16 S17 C18 181.4 180.0
O21 C15 N14 C16 187.4 180.3
N14 C15 C16 C20 8.4 180.3
N14 C15 C16 S17 187.8 0.7
C13 N14 C15 HN14 180.0 180.1
C15 N14 C13 C5 230.7 180.0
C15 N14 C13 S12 59.8 0.3
C20 C16 C15 N14 8.4 180.3
C15 C16 C20 S17 179.3 180.3
C20 C16 S17 C18 0.9 0.3
C18 C19 C20 C16 1.1 0.6
C16 C20 C19 H19 181.1 180.2
C19 C20 C16 H20 180.0 179.7
S17 C16 C15 N14 187.8 0.7
C15 C16 S17 C20 180.5 179.7
S17 C16 C20 C19 358.8 359.5
S17 C16 C20 H20 178.7 179.8
C16 S17 C18 C19 359.8 360.0
C16 S17 C18 H18 179.8 179.9
C18 S17 C16 C20 0.9 0.3
C19 C18 S17 H18 180.0 180.1
S17 C18 C19 C20 359.5 359.7
S17 C18 C19 H19 179.5 180.0
C16 C20 C19 C18 1.1 0.6
S17 C18 C19 H18 180.0 179.9
C20 C19 C18 H19 180.0 179.7
C18 C19 C20 H20 181.1 180.3
S17 C18 H18 C19 180.0 180.1
H18 C18 C19 C20 179.5 179.8
H18 C18 C19 H19 359.5 0.1
C16 C20 C19 H20 180.0 180.3
C20 C19 C18 H18 179.5 179.8
C18 C19 C20 H19 180.0 180.3
H19 C19 C18 H18 359.5 0.1
C18 C19 H19 C20 180.0 179.6
H19 C19 C20 H20 1.1 359.9
C16 C20 H20 C19 180.0 179.7
H20 C20 C19 H19 1.1 359.9
C15 N14 C13 HN14 180.0 179.9
S12 C13 N14 C5 189.1 180.3
N14 C13 C5 C6 186.3 179.8
N14 C13 C5 C4 358.3 359.9
N14 C13 S12 C7 174.0 180.0
C15 N14 HN14 C13 180.0 180.1
HN14 N14 C13 C5 50.7 0.1
HN14 N14 C13 S12 239.8 180.3
C5 C13 N14 HN14 50.7 0.1
N14 C13 C5 S12 188.3 180.2
C5 C13 S12 C7 2.2 0.2
C7 C6 C5 C13 0.6 0.5
C11 C6 C5 C13 179.6 180.2
C6 C5 C13 C4 188.0 179.9
C13 C5 C4 N3 29.6 270.0
C13 C5 C4 O22 189.7 90.0
S12 C13 N14 HN14 239.8 180.3
N14 C13 S12 C5 171.8 179.8
S12 C13 C5 C6 358.0 359.6
S12 C13 C5 C4 170.0 179.7
C13 S12 C7 C6 358.2 0.0
C13 S12 C7 C8 177.6 179.9
C7 S12 C13 C5 2.2 0.2
C6 C7 S12 C8 180.6 180.1
S12 C7 C6 C5 1.0 359.7
S12 C7 C6 C11 182.0 180.0
S12 C7 C8 C9 215.1 163.4
S12 C7 C8 H81 335.1 283.2
S12 C7 C8 H82 92.6 43.7
C13 C5 C6 C7 0.6 0.5
S12 C7 C6 C8 179.4 179.9
C6 C7 C8 C9 34.4 343.3
C6 C7 C8 H81 154.4 103.1
C6 C7 C8 H82 271.9 223.6
C11 C6 C7 C5 181.0 180.2
C7 C6 C5 C4 187.6 180.3
C7 C6 C11 C10 342.4 342.8
C7 C6 C11 H111 102.4 102.6
C7 C6 C11 H112 222.8 223.0
S12 C7 C8 C6 180.7 180.1
C8 C7 C6 C5 181.7 179.8
C8 C7 C6 C11 2.6 0.0
C10 C9 C8 C7 305.0 50.0
C7 C8 C9 H91 185.0 290.1
C7 C8 C9 H92 63.4 169.8
C9 C8 C7 H81 240.0 240.2
C9 C8 C7 H82 122.5 119.8
H81 C8 C7 H82 242.5 239.6
C13 C5 C6 C4 173.0 180.1
C5 C6 C7 C8 181.7 179.8
C7 C6 C5 C11 181.0 180.2
C5 C6 C11 C10 163.5 163.1
C5 C6 C11 H111 283.5 282.8
C5 C6 C11 H112 43.9 43.2
C6 C5 C4 N3 201.1 90.2
C6 C5 C4 O22 1.2 270.2
C13 C5 C6 C11 179.6 180.2
C11 C6 C7 C8 2.6 0.0
C7 C6 C11 C5 178.9 179.8
C11 C6 C5 C4 6.6 0.1
C10 C11 C6 H111 240.0 240.2
C10 C11 C6 H112 119.6 119.8
C6 C11 C10 C9 352.9 50.7
C6 C11 C10 H101 112.9 170.5
C6 C11 C10 H102 237.4 290.7
H111 C11 C6 H112 239.6 239.6
C10 C11 C6 C5 163.5 163.1
C6 C11 C10 H111 120.0 119.8
C6 C11 C10 H112 240.4 240.2
H111 C11 C10 H112 120.4 120.4
C9 C10 C11 H101 240.0 240.1
C9 C10 C11 H102 115.6 119.9
C11 C10 C9 C8 46.5 289.6
C11 C10 C9 H91 166.5 49.5
C11 C10 C9 H92 288.1 169.8
H101 C10 C11 H102 235.5 239.8
H111 C11 C6 C5 283.5 282.8
C6 C11 H111 C10 239.2 240.7
C6 C11 H111 H112 119.6 120.3
C10 C11 H111 H112 240.4 239.6
H111 C11 C10 C9 232.9 290.9
H111 C11 C10 H101 352.9 50.8
H111 C11 C10 H102 117.4 171.0
H112 C11 C6 C5 43.9 43.2
C6 C11 H112 C10 120.5 119.3
C6 C11 H112 H111 240.3 239.7
C10 C11 H112 H111 119.8 120.3
H112 C11 C10 C9 112.5 170.5
H112 C11 C10 H101 232.5 290.4
H112 C11 C10 H102 357.0 50.6
C7 C8 C9 C10 305.0 50.0
C9 C10 C11 H111 232.9 290.9
C9 C10 C11 H112 112.5 170.5
C11 C10 C9 H101 120.0 119.9
C11 C10 C9 H102 244.4 240.0
H101 C10 C9 H102 124.5 120.2
C8 C9 C10 H91 240.0 240.1
C8 C9 C10 H92 118.4 119.8
C10 C9 C8 H81 185.0 290.2
C10 C9 C8 H82 67.5 169.8
H91 C9 C10 H92 238.4 239.7
H101 C10 C11 H111 352.9 50.8
H101 C10 C11 H112 232.5 290.4
C11 C10 H101 C9 232.4 240.3
C11 C10 H101 H102 116.2 120.2
C9 C10 H101 H102 243.8 239.9
H101 C10 C9 C8 286.5 169.8
H101 C10 C9 H91 46.5 289.6
H101 C10 C9 H92 168.1 49.9
H102 C10 C11 H111 117.4 171.0
H102 C10 C11 H112 357.0 50.6
C11 C10 H102 C9 125.3 119.7
C11 C10 H102 H101 242.6 239.8
C9 C10 H102 H101 117.3 120.1
H102 C10 C9 C8 162.0 49.6
H102 C10 C9 H91 282.0 169.5
H102 C10 C9 H92 43.6 289.8
C7 C8 C9 H81 120.0 119.8
C7 C8 C9 H82 237.5 240.2
C8 C9 C10 H101 286.5 169.8
C8 C9 C10 H102 162.0 49.6
C10 C9 C8 H91 120.0 119.9
C10 C9 C8 H92 241.6 240.2
H91 C9 C8 H92 121.6 120.3
H81 C8 C9 H82 117.5 120.5
H91 C9 C10 H101 46.5 289.6
H91 C9 C10 H102 282.0 169.5
C10 C9 H91 C8 237.0 240.5
C10 C9 H91 H92 118.5 120.2
C8 C9 H91 H92 241.5 239.7
H91 C9 C8 H81 65.0 170.4
H91 C9 C8 H82 307.5 49.9
H92 C9 C10 H101 168.1 49.9
H92 C9 C10 H102 43.6 289.8
C10 C9 H92 C8 122.0 119.5
C10 C9 H92 H91 241.0 239.8
C8 C9 H92 H91 119.0 120.3
H92 C9 C8 H81 303.5 50.0
H92 C9 C8 H82 185.9 289.6
C7 C8 H81 C9 245.6 240.7
C7 C8 H81 H82 122.8 120.3
H81 C8 C9 H91 65.0 170.4
H81 C8 C9 H92 303.5 50.0
C9 C8 H81 H82 237.2 239.6
C7 C8 H82 C9 116.3 119.3
C7 C8 H82 H81 238.2 239.6
H82 C8 C9 H91 307.5 49.9
H82 C8 C9 H92 185.9 289.6
C9 C8 H82 H81 121.8 120.4
C13 C5 C4 C6 188.5 179.9
O22 C4 C5 N3 160.1 180.0
C5 C4 N3 C23 190.0 360.0
C5 C4 N3 C2 355.7 180.0
C5 C4 N3 O22 163.2 180.0
C2 N3 C4 C23 165.7 180.0
C4 N3 C23 C24 118.1 90.0
C4 N3 C23 H231 238.1 210.0
C4 N3 C23 H232 355.3 330.0
C4 N3 C2 C1 92.8 90.0
C4 N3 C2 H21 212.8 210.0
C4 N3 C2 H22 328.1 330.0
C5 C4 O22 N3 193.3 180.0
O22 C4 N3 C23 26.8 180.0
O22 C4 N3 C2 192.5 0.0
C4 N3 C23 C2 164.5 180.0
C23 N3 C2 C1 265.5 270.0
C23 N3 C2 H21 25.5 30.0
C23 N3 C2 H22 140.8 150.0
C24 C23 N3 H231 240.0 239.9
C24 C23 N3 H232 122.9 119.9
N3 C23 C24 H241 14.5 300.0
N3 C23 C24 H242 134.5 60.1
N3 C23 C24 H243 254.5 180.0
H231 C23 N3 H232 242.9 240.0
C4 N3 C2 C23 187.3 180.0
C2 N3 C23 C24 313.7 270.0
C2 N3 C23 H231 73.7 30.0
C2 N3 C23 H232 190.8 150.0
C1 C2 N3 H21 240.0 240.0
C1 C2 N3 H22 124.7 120.0
N3 C2 C1 H11 47.0 60.0
N3 C2 C1 H12 167.0 180.0
N3 C2 C1 H13 287.0 300.0
H21 C2 N3 H22 244.7 240.0
C1 C2 N3 C23 265.5 270.0
N3 C2 C1 H21 120.0 120.0
N3 C2 C1 H22 235.3 240.0
H21 C2 C1 H22 115.3 120.0
H11 C1 C2 H12 240.0 240.1
H11 C1 C2 H13 120.0 120.1
H12 C1 C2 H13 240.0 240.0
H21 C2 N3 C23 25.5 30.0
N3 C2 H21 C1 252.2 240.0
N3 C2 H21 H22 126.1 120.0
C1 C2 H21 H22 233.9 240.0
H21 C2 C1 H11 287.0 300.0
H21 C2 C1 H12 46.9 60.0
H21 C2 C1 H13 167.0 180.0
H22 C2 N3 C23 140.8 150.0
N3 C2 H22 C1 112.0 120.0
N3 C2 H22 H21 236.0 240.0
C1 C2 H22 H21 124.0 120.0
H22 C2 C1 H11 171.7 180.1
H22 C2 C1 H12 291.7 300.0
H22 C2 C1 H13 51.7 60.0
H11 C1 C2 H21 287.0 300.0
H11 C1 C2 H22 171.7 180.1
C2 C1 H11 H12 120.0 119.9
C2 C1 H11 H13 240.0 239.9
H12 C1 H11 H13 120.0 120.0
H12 C1 C2 H21 46.9 60.0
H12 C1 C2 H22 291.7 300.0
C2 C1 H12 H11 240.0 240.1
C2 C1 H12 H13 120.0 120.0
H11 C1 H12 H13 240.0 240.0
H13 C1 C2 H21 167.0 180.0
H13 C1 C2 H22 51.7 60.0
C2 C1 H13 H11 120.0 120.0
C2 C1 H13 H12 240.0 240.0
H11 C1 H13 H12 120.0 120.0
N3 C23 C24 H231 120.0 120.0
N3 C23 C24 H232 237.1 240.1
H231 C23 C24 H232 117.2 120.1
H241 C24 C23 H242 240.0 240.0
H241 C24 C23 H243 120.0 120.0
H242 C24 C23 H243 240.0 240.1
N3 C23 H231 C24 246.6 240.0
N3 C23 H231 H232 123.3 120.0
C24 C23 H231 H232 236.7 240.0
H231 C23 C24 H241 254.5 180.0
H231 C23 C24 H242 14.5 300.0
H231 C23 C24 H243 134.5 60.0
N3 C23 H232 C24 115.6 120.0
N3 C23 H232 H231 237.8 240.0
C24 C23 H232 H231 122.2 120.1
H232 C23 C24 H241 137.3 59.9
H232 C23 C24 H242 257.3 180.0
H232 C23 C24 H243 17.3 299.9
H241 C24 C23 H231 254.5 180.0
H241 C24 C23 H232 137.3 59.9
C23 C24 H241 H242 120.0 120.0
C23 C24 H241 H243 240.0 240.0
H242 C24 H241 H243 120.0 119.9
H242 C24 C23 H231 14.5 300.0
H242 C24 C23 H232 257.3 180.0
C23 C24 H242 H241 240.0 239.9
C23 C24 H242 H243 120.0 119.9
H241 C24 H242 H243 240.0 240.0
H243 C24 C23 H231 134.5 60.0
H243 C24 C23 H232 17.3 299.9
C23 C24 H243 H241 120.0 120.1
C23 C24 H243 H242 240.0 240.1
H241 C24 H243 H242 120.0 120.0