PDB Chemical Component JWS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JWS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.370 |
1.329 |
| N1 |
C15 |
1.381 |
1.330 |
| C2 |
N3 |
1.350 |
1.381 |
| C2 |
N4 |
1.378 |
1.329 |
| N4 |
C5 |
1.378 |
1.331 |
| C5 |
C6 |
1.496 |
1.481 |
| C5 |
N14 |
1.375 |
1.330 |
| C6 |
C7 |
1.462 |
1.398 |
| C6 |
C13 |
1.438 |
1.395 |
| C7 |
O8 |
1.369 |
1.358 |
| C7 |
C9 |
1.435 |
1.386 |
| C9 |
C10 |
1.446 |
1.380 |
| C10 |
C11 |
1.473 |
1.389 |
| C11 |
O12 |
1.314 |
1.359 |
| C11 |
C13 |
1.459 |
1.384 |
| O12 |
C17 |
1.445 |
1.429 |
| N14 |
C15 |
1.367 |
1.329 |
| C15 |
N16 |
1.340 |
1.380 |
| N3 |
HN3 |
1.000 |
0.970 |
| N3 |
HN3A |
1.000 |
0.970 |
| O8 |
HO8 |
0.950 |
0.968 |
| C9 |
H9 |
1.080 |
1.080 |
| C10 |
H10 |
1.080 |
1.080 |
| C13 |
H13 |
1.080 |
1.080 |
| N16 |
HN16 |
1.000 |
0.970 |
| N16 |
HN1A |
1.000 |
0.971 |
| C17 |
H17 |
1.100 |
1.090 |
| C17 |
H17A |
1.100 |
1.089 |
| C17 |
H17B |
1.100 |
1.090 |
Bond Angles for JWS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C15 |
120.2 |
120.0 |
| N1 |
C2 |
N3 |
120.6 |
119.9 |
| N1 |
C2 |
N4 |
119.8 |
120.1 |
| N1 |
C15 |
N14 |
119.5 |
120.0 |
| N1 |
C15 |
N16 |
121.0 |
120.0 |
| N3 |
C2 |
N4 |
119.6 |
120.0 |
| C2 |
N3 |
HN3 |
109.5 |
120.0 |
| C2 |
N3 |
HN3A |
109.4 |
120.0 |
| C2 |
N4 |
C5 |
120.5 |
120.0 |
| N4 |
C5 |
C6 |
120.0 |
120.0 |
| N4 |
C5 |
N14 |
119.0 |
119.9 |
| C6 |
C5 |
N14 |
121.0 |
120.1 |
| C5 |
C6 |
C7 |
122.4 |
120.2 |
| C5 |
C6 |
C13 |
118.2 |
120.1 |
| C5 |
N14 |
C15 |
121.1 |
120.0 |
| C7 |
C6 |
C13 |
119.4 |
119.7 |
| C6 |
C7 |
O8 |
119.5 |
120.1 |
| C6 |
C7 |
C9 |
119.5 |
119.9 |
| C6 |
C13 |
C11 |
122.7 |
119.9 |
| C6 |
C13 |
H13 |
118.7 |
120.1 |
| O8 |
C7 |
C9 |
120.9 |
120.1 |
| C7 |
O8 |
HO8 |
109.5 |
114.0 |
| C7 |
C9 |
C10 |
120.5 |
120.1 |
| C7 |
C9 |
H9 |
119.7 |
120.0 |
| C9 |
C10 |
C11 |
121.5 |
120.3 |
| C10 |
C9 |
H9 |
119.8 |
119.9 |
| C9 |
C10 |
H10 |
119.2 |
119.9 |
| C10 |
C11 |
O12 |
118.4 |
120.0 |
| C10 |
C11 |
C13 |
116.3 |
120.1 |
| C11 |
C10 |
H10 |
119.2 |
119.8 |
| O12 |
C11 |
C13 |
125.3 |
119.9 |
| C11 |
O12 |
C17 |
124.0 |
117.0 |
| C11 |
C13 |
H13 |
118.7 |
120.1 |
| O12 |
C17 |
H17 |
109.5 |
109.4 |
| O12 |
C17 |
H17A |
109.5 |
109.5 |
| O12 |
C17 |
H17B |
109.5 |
109.4 |
| N14 |
C15 |
N16 |
119.5 |
120.1 |
| C15 |
N16 |
HN16 |
109.5 |
120.1 |
| C15 |
N16 |
HN1A |
109.5 |
120.0 |
| HN3 |
N3 |
HN3A |
109.4 |
120.0 |
| HN16 |
N16 |
HN1A |
109.5 |
120.0 |
| H17 |
C17 |
H17A |
109.4 |
109.5 |
| H17 |
C17 |
H17B |
109.5 |
109.5 |
| H17A |
C17 |
H17B |
109.5 |
109.5 |
Torsion Angles for JWS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C15 |
N14 |
0.2 |
0.0 |
| C2 |
N1 |
C15 |
N16 |
180.2 |
180.0 |
| N3 |
C2 |
N1 |
N4 |
180.2 |
180.1 |
| N1 |
C2 |
N3 |
HN3 |
360.0 |
360.0 |
| N1 |
C2 |
N3 |
HN3A |
120.0 |
180.0 |
| N1 |
C2 |
N4 |
C5 |
359.8 |
0.0 |
| C15 |
N1 |
C2 |
N3 |
180.2 |
180.1 |
| C15 |
N1 |
C2 |
N4 |
0.0 |
360.0 |
| C5 |
N14 |
C15 |
N1 |
359.7 |
360.0 |
| N14 |
C15 |
N1 |
N16 |
180.0 |
180.0 |
| N1 |
C15 |
N16 |
HN16 |
0.0 |
0.0 |
| N1 |
C15 |
N16 |
HN1A |
120.0 |
180.0 |
| N3 |
C2 |
N1 |
C15 |
180.2 |
180.1 |
| N1 |
C2 |
N3 |
N4 |
179.8 |
179.9 |
| N3 |
C2 |
N4 |
C5 |
179.6 |
179.9 |
| HN3 |
N3 |
C2 |
HN3A |
240.0 |
179.9 |
| N4 |
C2 |
N1 |
C15 |
0.0 |
360.0 |
| N1 |
C2 |
N4 |
N3 |
180.2 |
180.1 |
| N4 |
C2 |
N3 |
HN3 |
180.2 |
180.0 |
| N4 |
C2 |
N3 |
HN3A |
300.1 |
0.1 |
| C2 |
N4 |
C5 |
C6 |
180.5 |
180.0 |
| C2 |
N4 |
C5 |
N14 |
0.1 |
360.0 |
| C6 |
C5 |
N4 |
N14 |
180.4 |
180.0 |
| N4 |
C5 |
C6 |
C7 |
179.2 |
0.0 |
| N4 |
C5 |
C6 |
C13 |
359.4 |
179.8 |
| N4 |
C5 |
N14 |
C15 |
0.1 |
0.0 |
| N4 |
C5 |
C6 |
N14 |
179.6 |
180.0 |
| C6 |
C5 |
N14 |
C15 |
179.7 |
180.0 |
| C7 |
C6 |
C5 |
C13 |
179.8 |
180.2 |
| C5 |
C6 |
C7 |
O8 |
0.3 |
360.0 |
| C5 |
C6 |
C7 |
C9 |
180.5 |
180.0 |
| C5 |
C6 |
C13 |
C11 |
179.8 |
179.7 |
| C5 |
C6 |
C13 |
H13 |
359.8 |
359.9 |
| N1 |
C15 |
N14 |
C5 |
359.7 |
360.0 |
| N4 |
C5 |
N14 |
C6 |
180.4 |
180.0 |
| N14 |
C5 |
C6 |
C7 |
359.6 |
180.0 |
| N14 |
C5 |
C6 |
C13 |
179.8 |
359.8 |
| C5 |
N14 |
C15 |
N16 |
179.8 |
180.0 |
| C7 |
C6 |
C5 |
N14 |
359.6 |
180.0 |
| C5 |
C6 |
C7 |
C13 |
180.2 |
179.8 |
| C7 |
C6 |
C13 |
C11 |
360.0 |
359.5 |
| C7 |
C6 |
C13 |
H13 |
180.0 |
179.7 |
| O8 |
C7 |
C6 |
C9 |
179.8 |
180.0 |
| C6 |
C7 |
O8 |
HO8 |
180.0 |
90.0 |
| C6 |
C7 |
C9 |
C10 |
359.7 |
0.0 |
| C6 |
C7 |
C9 |
H9 |
179.7 |
180.0 |
| C13 |
C6 |
C5 |
N14 |
179.8 |
359.8 |
| C5 |
C6 |
C13 |
C7 |
179.8 |
180.2 |
| C13 |
C6 |
C7 |
O8 |
180.1 |
180.2 |
| C13 |
C6 |
C7 |
C9 |
0.3 |
0.2 |
| C10 |
C11 |
C13 |
C6 |
359.7 |
0.5 |
| O12 |
C11 |
C13 |
C6 |
179.7 |
180.3 |
| C11 |
C13 |
C6 |
H13 |
180.0 |
179.8 |
| O8 |
C7 |
C6 |
C13 |
180.1 |
180.2 |
| C6 |
C7 |
O8 |
C9 |
180.2 |
180.0 |
| O8 |
C7 |
C9 |
C10 |
179.9 |
180.1 |
| O8 |
C7 |
C9 |
H9 |
359.9 |
360.0 |
| C9 |
C7 |
C6 |
C13 |
0.3 |
0.2 |
| C6 |
C7 |
C9 |
O8 |
179.8 |
180.0 |
| C9 |
C7 |
O8 |
HO8 |
359.8 |
270.0 |
| C7 |
C9 |
C10 |
C11 |
360.0 |
360.0 |
| C10 |
C9 |
C7 |
H9 |
180.0 |
180.1 |
| C7 |
C9 |
C10 |
H10 |
180.0 |
180.0 |
| C7 |
C9 |
C10 |
H9 |
180.0 |
179.9 |
| C9 |
C10 |
C11 |
O12 |
180.4 |
180.0 |
| C9 |
C10 |
C11 |
C13 |
0.3 |
359.8 |
| C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
| C6 |
C13 |
C11 |
C10 |
359.7 |
0.5 |
| C11 |
C10 |
C9 |
H9 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
| O12 |
C11 |
C10 |
C13 |
180.0 |
180.2 |
| C10 |
C11 |
O12 |
C17 |
0.0 |
0.1 |
| C10 |
C11 |
C13 |
H13 |
179.7 |
180.3 |
| C6 |
C13 |
C11 |
O12 |
179.7 |
180.3 |
| C10 |
C11 |
O12 |
C13 |
180.0 |
179.8 |
| O12 |
C11 |
C10 |
H10 |
0.4 |
360.0 |
| O12 |
C11 |
C13 |
H13 |
359.6 |
0.1 |
| C11 |
O12 |
C17 |
H17 |
180.0 |
300.0 |
| C11 |
O12 |
C17 |
H17A |
300.0 |
60.0 |
| C11 |
O12 |
C17 |
H17B |
60.0 |
180.0 |
| C6 |
C13 |
C11 |
H13 |
180.0 |
180.2 |
| C10 |
C11 |
C13 |
O12 |
180.0 |
180.2 |
| C13 |
C11 |
C10 |
H10 |
180.3 |
179.7 |
| C13 |
C11 |
O12 |
C17 |
180.1 |
180.3 |
| C17 |
O12 |
C11 |
C13 |
180.1 |
180.3 |
| H17 |
C17 |
O12 |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
O12 |
H17B |
120.0 |
120.0 |
| H17A |
C17 |
O12 |
H17B |
240.0 |
240.0 |
| N1 |
C15 |
N14 |
N16 |
180.0 |
180.0 |
| N14 |
C15 |
N16 |
HN16 |
180.0 |
180.0 |
| N14 |
C15 |
N16 |
HN1A |
300.0 |
359.9 |
| N1 |
C15 |
N16 |
N14 |
180.0 |
180.0 |
| HN16 |
N16 |
C15 |
HN1A |
240.0 |
180.1 |
| HN3 |
N3 |
C2 |
N4 |
180.2 |
180.0 |
| C2 |
N3 |
HN3 |
HN3A |
120.0 |
180.1 |
| HN3A |
N3 |
C2 |
N4 |
300.1 |
0.1 |
| C2 |
N3 |
HN3A |
HN3 |
240.0 |
179.9 |
| HO8 |
O8 |
C7 |
C9 |
359.8 |
270.0 |
| C7 |
C9 |
H9 |
C10 |
180.0 |
180.1 |
| H9 |
C9 |
C10 |
C11 |
180.0 |
180.0 |
| H9 |
C9 |
C10 |
H10 |
360.0 |
0.1 |
| C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
| H10 |
C10 |
C9 |
H9 |
360.0 |
0.1 |
| H10 |
C10 |
C11 |
O12 |
0.4 |
360.0 |
| H10 |
C10 |
C11 |
C13 |
180.3 |
179.7 |
| C6 |
C13 |
H13 |
C11 |
180.0 |
179.8 |
| C15 |
N16 |
HN16 |
HN1A |
120.0 |
179.9 |
| C15 |
N16 |
HN1A |
HN16 |
240.0 |
180.1 |
| O12 |
C17 |
H17 |
H17A |
120.0 |
120.0 |
| O12 |
C17 |
H17 |
H17B |
240.0 |
240.0 |
| H17A |
C17 |
H17 |
H17B |
120.0 |
120.0 |
| O12 |
C17 |
H17A |
H17 |
240.0 |
240.0 |
| O12 |
C17 |
H17A |
H17B |
120.0 |
120.0 |
| H17 |
C17 |
H17A |
H17B |
240.0 |
240.0 |
| O12 |
C17 |
H17B |
H17 |
120.0 |
120.0 |
| O12 |
C17 |
H17B |
H17A |
240.0 |
240.0 |
| H17 |
C17 |
H17B |
H17A |
120.0 |
120.0 |