PDB Chemical Component JW2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JW2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O10 |
C9 |
1.228 |
1.214 |
| C7 |
C6 |
1.543 |
1.548 |
| C7 |
C8 |
1.537 |
1.549 |
| C6 |
C5 |
1.537 |
1.543 |
| C12 |
N11 |
1.464 |
1.465 |
| C12 |
C13 |
1.508 |
1.508 |
| C9 |
N11 |
1.344 |
1.348 |
| C9 |
C2 |
1.489 |
1.494 |
| C5 |
C4 |
1.533 |
1.539 |
| N3 |
C2 |
1.346 |
1.348 |
| N3 |
C4 |
1.462 |
1.465 |
| N18 |
C13 |
1.334 |
1.318 |
| N18 |
C17 |
1.328 |
1.319 |
| C2 |
O1 |
1.220 |
1.213 |
| C8 |
C4 |
1.542 |
1.542 |
| C13 |
C14 |
1.401 |
1.382 |
| C17 |
C16 |
1.395 |
1.381 |
| C14 |
C15 |
1.396 |
1.386 |
| C16 |
C15 |
1.397 |
1.387 |
| C4 |
H1 |
1.100 |
1.090 |
| C5 |
H2 |
1.100 |
1.090 |
| C5 |
H3 |
1.100 |
1.090 |
| C6 |
H4 |
1.100 |
1.090 |
| C6 |
H5 |
1.100 |
1.090 |
| C7 |
H6 |
1.100 |
1.090 |
| C7 |
H7 |
1.100 |
1.090 |
| C8 |
H8 |
1.100 |
1.090 |
| C8 |
H9 |
1.100 |
1.090 |
| C12 |
H10 |
1.100 |
1.090 |
| C12 |
H11 |
1.100 |
1.089 |
| C15 |
H12 |
1.080 |
1.081 |
| C16 |
H13 |
1.080 |
1.080 |
| C17 |
H14 |
1.080 |
1.080 |
| N3 |
H15 |
0.999 |
0.970 |
| N11 |
H16 |
1.000 |
0.970 |
| C14 |
H17 |
1.080 |
1.080 |
Bond Angles for JW2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O10 |
C9 |
N11 |
122.2 |
120.0 |
| C7 |
C6 |
H4 |
110.4 |
110.5 |
| C7 |
C6 |
H5 |
110.4 |
110.6 |
| C8 |
C7 |
H6 |
111.4 |
110.8 |
| C8 |
C7 |
H7 |
111.5 |
110.8 |
| C7 |
C8 |
H8 |
110.7 |
110.5 |
| C7 |
C8 |
H9 |
110.7 |
110.5 |
| C6 |
C5 |
H2 |
110.5 |
110.0 |
| C6 |
C5 |
H3 |
110.5 |
110.0 |
| N11 |
C12 |
C13 |
109.8 |
109.4 |
| C12 |
N11 |
C9 |
122.4 |
120.0 |
| N11 |
C12 |
H10 |
109.4 |
109.5 |
| N11 |
C12 |
H11 |
109.4 |
109.5 |
| C12 |
N11 |
H16 |
118.8 |
120.0 |
| C12 |
C13 |
C14 |
120.4 |
119.6 |
| C13 |
C12 |
H10 |
109.4 |
109.4 |
| C13 |
C12 |
H11 |
109.4 |
109.5 |
| C9 |
N11 |
H16 |
118.8 |
120.0 |
| C5 |
C4 |
H1 |
110.8 |
110.0 |
| N3 |
C4 |
H1 |
111.9 |
110.0 |
| N18 |
C17 |
H14 |
119.7 |
119.6 |
| C8 |
C4 |
H1 |
110.7 |
110.0 |
| C13 |
C14 |
H17 |
120.7 |
120.4 |
| C17 |
C16 |
H13 |
120.5 |
120.5 |
| C14 |
C15 |
H12 |
120.5 |
120.8 |
| C16 |
C15 |
H12 |
120.4 |
120.8 |
| H2 |
C5 |
H3 |
109.4 |
110.0 |
| H4 |
C6 |
H5 |
109.5 |
110.5 |
| H6 |
C7 |
H7 |
109.5 |
110.8 |
| H8 |
C8 |
H9 |
109.5 |
110.5 |
| H10 |
C12 |
H11 |
109.5 |
109.5 |
Torsion Angles for JW2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C12 |
N11 |
C9 |
O10 |
0.7 |
0.1 |
| O10 |
C9 |
N11 |
H16 |
180.7 |
180.0 |
| C7 |
C6 |
C5 |
H2 |
96.3 |
264.3 |
| C7 |
C6 |
C5 |
H3 |
217.6 |
142.9 |
| H4 |
C6 |
C7 |
H5 |
238.9 |
122.6 |
| C8 |
C7 |
C6 |
H4 |
157.7 |
203.4 |
| C8 |
C7 |
C6 |
H5 |
278.9 |
80.8 |
| C7 |
C8 |
C4 |
H1 |
146.0 |
95.7 |
| H6 |
C7 |
C8 |
H7 |
122.6 |
123.3 |
| H8 |
C8 |
C7 |
H9 |
238.4 |
122.6 |
| C6 |
C5 |
C4 |
H1 |
238.0 |
240.7 |
| H2 |
C5 |
C6 |
H3 |
238.7 |
121.4 |
| O10 |
C9 |
N11 |
C12 |
0.7 |
0.1 |
| N11 |
C12 |
C13 |
C14 |
336.9 |
94.9 |
| C13 |
C12 |
N11 |
H10 |
239.9 |
240.1 |
| C13 |
C12 |
N11 |
H11 |
120.0 |
120.0 |
| C9 |
N11 |
C12 |
H16 |
180.0 |
179.9 |
| H10 |
C12 |
N11 |
H11 |
240.1 |
239.9 |
| C13 |
C12 |
N11 |
C9 |
122.9 |
180.0 |
| N11 |
C12 |
C13 |
H10 |
120.0 |
119.9 |
| N11 |
C12 |
C13 |
H11 |
240.0 |
240.0 |
| C13 |
C12 |
N11 |
H16 |
302.9 |
0.1 |
| C12 |
C13 |
C14 |
H17 |
359.9 |
0.0 |
| H10 |
C12 |
C13 |
H11 |
119.9 |
120.0 |
| C9 |
N11 |
C12 |
C13 |
122.9 |
180.0 |
| C9 |
N11 |
C12 |
H10 |
242.9 |
299.9 |
| C9 |
N11 |
C12 |
H11 |
2.9 |
60.0 |
| C12 |
N11 |
C9 |
H16 |
180.0 |
180.1 |
| N3 |
C4 |
C5 |
H1 |
238.5 |
238.6 |
| C8 |
C4 |
C5 |
H1 |
120.6 |
119.3 |
| C5 |
C4 |
N3 |
H1 |
120.8 |
121.4 |
| C8 |
C4 |
N3 |
H1 |
236.2 |
238.6 |
| N18 |
C13 |
C12 |
H10 |
37.2 |
155.0 |
| N18 |
C13 |
C12 |
H11 |
277.3 |
35.0 |
| C13 |
N18 |
C17 |
H14 |
181.7 |
179.8 |
| N18 |
C13 |
C14 |
H17 |
179.5 |
180.0 |
| N18 |
C17 |
C16 |
H13 |
178.6 |
180.1 |
| C5 |
C4 |
C8 |
H1 |
239.3 |
240.7 |
| N3 |
C4 |
C8 |
H1 |
124.5 |
121.4 |
| C14 |
C13 |
C12 |
H10 |
216.8 |
335.0 |
| C14 |
C13 |
C12 |
H11 |
96.9 |
215.0 |
| C13 |
C14 |
C15 |
H12 |
180.8 |
180.0 |
| C17 |
C16 |
C15 |
H12 |
180.1 |
180.0 |
| C12 |
C13 |
C14 |
C15 |
179.9 |
180.0 |
| C16 |
C15 |
C14 |
H12 |
180.0 |
179.7 |
| C14 |
C15 |
C16 |
H12 |
180.0 |
180.3 |
| C6 |
C5 |
H2 |
H3 |
121.9 |
238.6 |
| H2 |
C5 |
C4 |
H1 |
118.7 |
360.0 |
| C6 |
C5 |
H3 |
H2 |
238.1 |
121.4 |
| H3 |
C5 |
C4 |
H1 |
357.4 |
121.4 |
| C7 |
C6 |
H4 |
H5 |
121.7 |
237.3 |
| H4 |
C6 |
C5 |
H2 |
336.8 |
22.9 |
| H4 |
C6 |
C5 |
H3 |
98.2 |
261.6 |
| C7 |
C6 |
H5 |
H4 |
238.3 |
122.6 |
| H5 |
C6 |
C5 |
H2 |
215.7 |
145.5 |
| H5 |
C6 |
C5 |
H3 |
337.0 |
24.1 |
| H6 |
C7 |
C6 |
H4 |
276.4 |
321.8 |
| H6 |
C7 |
C6 |
H5 |
37.5 |
199.1 |
| C8 |
C7 |
H6 |
H7 |
236.3 |
236.7 |
| H6 |
C7 |
C8 |
H8 |
321.9 |
160.9 |
| H6 |
C7 |
C8 |
H9 |
83.5 |
38.3 |
| H7 |
C7 |
C6 |
H4 |
39.0 |
85.1 |
| H7 |
C7 |
C6 |
H5 |
160.1 |
322.5 |
| C8 |
C7 |
H7 |
H6 |
123.7 |
123.3 |
| H7 |
C7 |
C8 |
H8 |
199.3 |
37.6 |
| H7 |
C7 |
C8 |
H9 |
320.9 |
275.0 |
| H8 |
C8 |
C7 |
H6 |
321.9 |
160.9 |
| H8 |
C8 |
C7 |
H7 |
199.3 |
37.6 |
| C7 |
C8 |
H8 |
H9 |
122.3 |
237.4 |
| H8 |
C8 |
C4 |
H1 |
26.8 |
214.4 |
| H9 |
C8 |
C7 |
H6 |
83.5 |
38.3 |
| H9 |
C8 |
C7 |
H7 |
320.9 |
275.0 |
| C7 |
C8 |
H9 |
H8 |
237.7 |
122.6 |
| H9 |
C8 |
C4 |
H1 |
265.2 |
337.0 |
| N11 |
C12 |
H10 |
C13 |
239.7 |
240.1 |
| H10 |
C12 |
N11 |
C9 |
242.9 |
299.9 |
| N11 |
C12 |
H10 |
H11 |
119.8 |
120.1 |
| H10 |
C12 |
N11 |
H16 |
63.0 |
120.0 |
| H10 |
C12 |
C13 |
C14 |
216.8 |
335.0 |
| C13 |
C12 |
H10 |
H11 |
240.2 |
240.0 |
| N11 |
C12 |
H11 |
C13 |
120.3 |
120.0 |
| H11 |
C12 |
N11 |
C9 |
2.9 |
60.0 |
| N11 |
C12 |
H11 |
H10 |
240.2 |
240.0 |
| H11 |
C12 |
N11 |
H16 |
182.9 |
240.1 |
| H11 |
C12 |
C13 |
C14 |
96.9 |
215.0 |
| C13 |
C12 |
H11 |
H10 |
119.8 |
120.0 |
| H13 |
C16 |
C15 |
H12 |
0.1 |
359.9 |
| H14 |
C17 |
C16 |
H13 |
358.6 |
360.0 |
| H15 |
N3 |
C4 |
H1 |
228.7 |
214.4 |
| H16 |
N11 |
C12 |
C13 |
302.9 |
0.1 |
| C12 |
N11 |
H16 |
C9 |
180.0 |
179.9 |
| H16 |
N11 |
C12 |
H10 |
63.0 |
120.0 |
| H16 |
N11 |
C12 |
H11 |
182.9 |
240.1 |
| H17 |
C14 |
C15 |
H12 |
0.8 |
360.0 |