PDB Chemical Component JTF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JTF

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 N01 1.461 1.469
N01 C02 1.460 1.469
N01 C03 1.465 1.469
C03 C04 1.516 1.530
C04 N02 1.454 1.465
N02 C05 1.374 1.398
C05 C06 1.397 1.385
C05 C1 1.409 1.398
C06 C07 1.385 1.387
C07 C08 1.382 1.367
C08 C09 1.397 1.400
C09 C10 1.436 1.464
C09 C1 1.406 1.406
C10 C11 1.352 1.356
C11 C12 1.505 1.507
C11 C13 1.463 1.412
C13 O1 1.231 1.219
C13 N1 1.357 1.345
N1 C1 1.385 1.379
C01 H011 1.100 1.090
C01 H012 1.100 1.091
C01 H013 1.100 1.090
C02 H021 1.100 1.090
C02 H022 1.100 1.090
C02 H023 1.100 1.090
C03 H031 1.100 1.090
C03 H032 1.100 1.090
C04 H041 1.100 1.090
C04 H042 1.100 1.090
N02 H02 1.000 0.971
C06 H06 1.080 1.080
C07 H07 1.080 1.080
C08 H08 1.080 1.080
C10 H10 1.080 1.080
C12 H121 1.100 1.090
C12 H122 1.100 1.090
C12 H123 1.100 1.089
N1 H1 1.000 0.970

Bond Angles for JTF

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 N01 C02 109.9 111.0
C01 N01 C03 110.6 111.0
N01 C01 H011 109.5 109.5
N01 C01 H012 109.5 109.5
N01 C01 H013 109.5 109.5
C02 N01 C03 111.4 111.0
N01 C02 H021 109.5 109.4
N01 C02 H022 109.5 109.5
N01 C02 H023 109.5 109.5
N01 C03 C04 112.6 109.5
N01 C03 H031 108.7 109.4
N01 C03 H032 108.7 109.4
C03 C04 N02 110.3 109.5
C04 C03 H031 108.7 109.5
C04 C03 H032 108.7 109.5
C03 C04 H041 109.3 109.5
C03 C04 H042 109.3 109.5
C04 N02 C05 125.0 120.0
N02 C04 H041 109.3 109.4
N02 C04 H042 109.3 109.4
C04 N02 H02 105.5 120.0
N02 C05 C06 123.2 120.2
N02 C05 C1 119.0 120.2
C05 N02 H02 105.5 120.0
C06 C05 C1 117.8 119.6
C05 C06 C07 121.2 120.6
C05 C06 H06 119.4 119.7
C05 C1 C09 121.4 119.4
C05 C1 N1 120.0 120.9
C06 C07 C08 120.4 120.7
C07 C06 H06 119.4 119.7
C06 C07 H07 119.8 119.7
C07 C08 C09 120.5 119.8
C08 C07 H07 119.8 119.6
C07 C08 H08 119.8 120.1
C08 C09 C10 124.1 121.1
C08 C09 C1 118.6 119.9
C09 C08 H08 119.7 120.1
C10 C09 C1 117.2 119.0
C09 C10 C11 122.8 118.6
C09 C10 H10 118.6 120.7
C09 C1 N1 118.6 119.7
C10 C11 C12 121.6 119.9
C10 C11 C13 119.6 120.2
C11 C10 H10 118.6 120.7
C12 C11 C13 118.9 119.9
C11 C12 H121 109.5 109.5
C11 C12 H122 109.5 109.4
C11 C12 H123 109.5 109.5
C11 C13 O1 124.6 119.2
C11 C13 N1 116.1 121.6
O1 C13 N1 119.3 119.2
C13 N1 C1 125.6 120.9
C13 N1 H1 117.2 119.5
C1 N1 H1 117.2 119.6
H011 C01 H012 109.4 109.4
H011 C01 H013 109.5 109.5
H012 C01 H013 109.5 109.5
H021 C02 H022 109.5 109.5
H021 C02 H023 109.5 109.5
H022 C02 H023 109.5 109.5
H031 C03 H032 109.5 109.5
H041 C04 H042 109.5 109.5
H121 C12 H122 109.4 109.5
H121 C12 H123 109.5 109.5
H122 C12 H123 109.5 109.5

Torsion Angles for JTF

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 N01 C01 C03 123.4 236.0
C01 N01 C02 H021 180.0 64.0
C01 N01 C02 H022 300.0 184.0
C01 N01 C02 H023 60.0 304.0
C01 N01 C03 C04 195.6 66.0
C01 N01 C03 H031 316.1 186.0
C01 N01 C03 H032 75.2 306.0
H011 C01 N01 H012 240.0 240.1
H011 C01 N01 H013 120.0 120.1
H012 C01 N01 H013 240.0 240.0
C01 N01 C02 C03 237.1 124.0
C02 N01 C01 H011 180.0 60.0
C02 N01 C01 H012 300.0 180.0
C02 N01 C01 H013 60.0 300.0
C02 N01 C03 C04 73.2 190.0
C02 N01 C03 H031 193.6 310.0
C02 N01 C03 H032 312.7 70.0
H021 C02 N01 H022 240.0 240.0
H021 C02 N01 H023 120.0 120.0
H022 C02 N01 H023 240.0 240.0
C01 N01 C03 C02 122.5 236.0
C03 N01 C01 H011 56.6 184.0
C03 N01 C01 H012 176.6 304.0
C03 N01 C01 H013 296.6 63.9
C03 N01 C02 H021 302.9 300.0
C03 N01 C02 H022 62.9 60.0
C03 N01 C02 H023 182.9 180.0
N01 C03 C04 N02 264.7 180.0
C04 C03 N01 H031 239.5 240.0
C04 C03 N01 H032 120.5 120.0
N01 C03 C04 H041 24.9 300.0
N01 C03 C04 H042 144.6 60.0
H031 C03 N01 H032 240.9 240.0
N01 C03 C04 H031 120.4 120.0
N01 C03 C04 H032 239.5 240.0
C03 C04 N02 C05 238.2 180.0
N02 C04 C03 H041 239.9 240.0
N02 C04 C03 H042 120.1 120.0
C03 C04 N02 H02 0.4 0.0
H031 C03 C04 H032 119.1 120.0
H041 C04 C03 H042 240.3 239.9
N02 C04 C03 H031 144.3 60.0
N02 C04 C03 H032 25.2 300.0
C03 C04 N02 H041 120.1 120.0
C03 C04 N02 H042 239.9 240.0
C04 N02 C05 C06 42.6 0.0
C04 N02 C05 C1 221.4 179.7
C05 N02 C04 H02 237.9 179.9
H041 C04 N02 H042 119.8 120.0
C05 N02 C04 H041 118.1 60.0
C05 N02 C04 H042 358.3 300.0
C04 N02 C05 H02 122.1 180.1
C06 C05 N02 C1 181.2 180.4
N02 C05 C06 C07 179.6 180.0
N02 C05 C06 H06 359.6 359.9
N02 C05 C1 C09 180.5 179.7
N02 C05 C1 N1 0.9 0.7
N02 C05 C06 C1 178.8 179.7
C06 C05 N02 H02 280.4 180.0
C06 C05 C1 C09 359.3 359.4
C06 C05 C1 N1 179.8 180.3
C05 C06 C07 C08 359.4 360.0
C07 C06 C05 H06 180.0 180.0
C05 C06 C07 H07 179.4 180.0
N02 C05 C1 C06 181.1 180.4
C1 C05 N02 H02 99.2 359.6
C1 C05 C06 C07 0.8 0.3
C1 C05 C06 H06 180.8 180.3
C08 C09 C1 C05 0.3 0.6
C10 C09 C1 C05 180.4 180.4
C09 C1 C05 N1 179.5 179.1
C13 N1 C1 C05 180.1 179.6
C05 C1 N1 H1 0.1 359.3
C07 C06 C05 C1 0.8 0.3
C05 C06 C07 H06 180.0 180.0
C06 C07 C08 C09 0.1 0.0
C08 C07 C06 H07 180.0 180.0
C06 C07 C08 H08 180.1 179.9
C08 C07 C06 H06 179.4 180.0
C06 C07 C08 H07 180.0 180.0
C07 C08 C09 C10 179.8 179.9
C07 C08 C09 C1 0.0 359.7
C09 C08 C07 H08 180.0 180.1
C05 C1 C09 C08 0.3 0.6
C09 C08 C07 H07 180.1 180.0
C07 C08 C09 H08 180.0 179.9
C10 C09 C08 C1 179.8 180.3
C08 C09 C10 C11 180.0 180.0
C08 C09 C10 H10 360.0 0.0
C08 C09 C1 N1 179.8 179.7
C05 C1 C09 C10 180.4 180.4
C08 C09 C10 C1 180.2 179.7
C10 C09 C08 H08 359.8 0.0
C10 C09 C1 N1 360.0 359.4
C09 C10 C11 C12 180.1 180.0
C09 C10 C11 C13 360.0 0.0
C11 C10 C09 H10 180.0 180.0
C05 C1 C09 N1 180.5 180.9
C08 C09 C1 C10 179.8 180.3
C1 C09 C08 H08 180.0 179.8
C1 C09 C10 C11 359.8 0.3
C1 C09 C10 H10 179.8 180.3
C13 N1 C1 C09 0.5 0.5
C09 C1 N1 H1 180.5 180.3
C11 C10 C09 C1 359.8 0.3
C09 C10 C11 H10 180.0 180.0
C12 C11 C10 C13 180.1 180.0
C10 C11 C12 H121 180.0 90.0
C10 C11 C12 H122 300.0 210.0
C10 C11 C12 H123 60.0 330.0
C10 C11 C13 O1 180.0 180.0
C10 C11 C13 N1 0.5 359.9
C10 C11 C12 C13 179.9 180.0
C12 C11 C10 H10 0.1 0.0
C12 C11 C13 O1 359.9 0.1
C12 C11 C13 N1 180.3 179.9
H121 C12 C11 H122 240.0 240.0
H121 C12 C11 H123 120.0 120.0
H122 C12 C11 H123 240.0 240.0
C10 C11 C13 C12 180.1 180.0
C13 C11 C10 H10 180.0 180.1
C13 C11 C12 H121 0.1 270.0
C13 C11 C12 H122 120.1 30.0
C13 C11 C12 H123 240.1 150.0
O1 C13 C11 N1 179.5 180.2
C11 C13 N1 C1 359.3 359.8
C11 C13 N1 H1 179.3 180.1
C11 C13 O1 N1 180.5 179.9
O1 C13 N1 C1 179.7 179.7
O1 C13 N1 H1 359.7 359.9
C05 C1 N1 C13 180.1 179.6
C09 C1 N1 C13 0.5 0.5
C11 C13 N1 O1 179.6 180.2
C1 N1 C13 H1 180.0 179.8
C05 C1 N1 C09 179.6 179.1
C13 N1 C1 H1 180.0 180.2
H011 C01 N01 C02 180.0 60.0
H011 C01 N01 C03 56.6 184.0
N01 C01 H011 H012 120.0 120.0
N01 C01 H011 H013 240.0 240.0
H012 C01 H011 H013 120.0 120.0
H012 C01 N01 C02 300.0 180.0
H012 C01 N01 C03 176.6 304.0
N01 C01 H012 H011 240.0 240.0
N01 C01 H012 H013 120.0 120.0
H011 C01 H012 H013 240.0 240.0
H013 C01 N01 C02 60.0 300.0
H013 C01 N01 C03 296.6 63.9
N01 C01 H013 H011 120.0 120.1
N01 C01 H013 H012 240.0 240.0
H011 C01 H013 H012 120.0 120.0
H021 C02 N01 C03 302.9 300.0
N01 C02 H021 H022 120.0 120.0
N01 C02 H021 H023 240.0 240.0
H022 C02 H021 H023 120.0 120.0
H022 C02 N01 C03 62.9 60.0
N01 C02 H022 H021 240.0 240.1
N01 C02 H022 H023 120.0 120.0
H021 C02 H022 H023 240.0 239.9
H023 C02 N01 C03 182.9 180.0
N01 C02 H023 H021 120.0 120.0
N01 C02 H023 H022 240.0 240.0
H021 C02 H023 H022 120.0 120.0
N01 C03 H031 C04 237.2 240.0
N01 C03 H031 H032 118.6 120.0
H031 C03 C04 N02 144.3 60.0
C04 C03 H031 H032 241.4 240.0
H031 C03 C04 H041 264.4 180.0
H031 C03 C04 H042 24.2 300.1
N01 C03 H032 C04 122.8 120.0
N01 C03 H032 H031 241.5 240.0
H032 C03 C04 N02 25.2 300.0
C04 C03 H032 H031 118.6 120.0
H032 C03 C04 H041 145.3 60.0
H032 C03 C04 H042 265.1 180.0
C03 C04 H041 N02 239.2 240.0
H041 C04 C03 H031 264.4 180.0
H041 C04 C03 H032 145.3 60.0
C03 C04 H041 H042 119.6 120.0
H041 C04 N02 C05 118.1 60.0
N02 C04 H041 H042 240.4 240.0
H041 C04 N02 H02 240.2 240.0
C03 C04 H042 N02 120.7 120.0
H042 C04 C03 H031 24.2 300.1
H042 C04 C03 H032 265.1 180.0
C03 C04 H042 H041 240.4 240.0
H042 C04 N02 C05 358.3 300.0
N02 C04 H042 H041 119.6 120.0
H042 C04 N02 H02 120.5 120.0
C04 N02 H02 C05 226.0 179.9
H02 N02 C04 H041 240.2 240.0
H02 N02 C04 H042 120.5 120.0
H02 N02 C05 C06 280.4 180.0
H02 N02 C05 C1 99.2 359.6
H06 C06 C05 C1 180.8 180.3
C05 C06 H06 C07 180.0 180.0
H06 C06 C07 C08 179.4 180.0
H06 C06 C07 H07 359.4 0.0
C06 C07 H07 C08 180.0 180.0
H07 C07 C06 H06 359.4 0.0
H07 C07 C08 C09 180.1 180.0
H07 C07 C08 H08 0.1 359.9
C07 C08 H08 C09 180.0 180.1
H08 C08 C07 H07 0.1 359.9
H08 C08 C09 C10 359.8 0.0
H08 C08 C09 C1 180.0 179.8
H10 C10 C09 C1 179.8 180.3
C09 C10 H10 C11 180.0 180.0
H10 C10 C11 C12 0.1 0.0
H10 C10 C11 C13 180.0 180.1
H121 C12 C11 C13 0.1 270.0
C11 C12 H121 H122 120.0 120.0
C11 C12 H121 H123 240.0 240.0
H122 C12 H121 H123 120.0 120.0
H122 C12 C11 C13 120.1 30.0
C11 C12 H122 H121 240.0 240.0
C11 C12 H122 H123 120.0 120.0
H121 C12 H122 H123 240.0 240.0
H123 C12 C11 C13 240.1 150.0
C11 C12 H123 H121 120.0 120.0
C11 C12 H123 H122 240.0 240.0
H121 C12 H123 H122 119.9 120.0
C13 N1 H1 C1 180.0 179.8