PDB Chemical Component JQN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JQN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.502 |
1.507 |
C2 |
C3 |
1.392 |
1.384 |
C2 |
C7 |
1.391 |
1.383 |
C3 |
C4 |
1.393 |
1.381 |
C4 |
C5 |
1.403 |
1.390 |
C5 |
C6 |
1.403 |
1.390 |
C5 |
S8 |
1.762 |
1.761 |
C6 |
C7 |
1.393 |
1.381 |
S8 |
C9 |
1.810 |
1.814 |
C9 |
C10 |
1.510 |
1.507 |
C10 |
O11 |
1.212 |
1.213 |
C10 |
C12 |
1.471 |
1.468 |
C12 |
C13 |
1.413 |
1.401 |
C12 |
C17 |
1.413 |
1.402 |
C13 |
C14 |
1.373 |
1.364 |
C14 |
C15 |
1.411 |
1.397 |
C15 |
C16 |
1.406 |
1.393 |
C15 |
N21 |
1.390 |
1.390 |
C16 |
C17 |
1.377 |
1.372 |
C16 |
C18 |
1.511 |
1.511 |
C18 |
C19 |
1.516 |
1.514 |
C19 |
O20 |
1.214 |
1.213 |
C19 |
N21 |
1.344 |
1.343 |
C1 |
H11C |
1.101 |
1.090 |
C1 |
H12C |
1.100 |
1.090 |
C1 |
H13C |
1.100 |
1.091 |
C3 |
H3 |
1.080 |
1.079 |
C7 |
H7 |
1.081 |
1.079 |
C4 |
H4 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
C9 |
H91C |
1.100 |
1.089 |
C9 |
H92C |
1.101 |
1.091 |
C13 |
H13 |
1.079 |
1.081 |
C17 |
H17 |
1.080 |
1.080 |
C14 |
H14 |
1.080 |
1.080 |
N21 |
H21 |
1.000 |
0.970 |
C18 |
H181 |
1.100 |
1.090 |
C18 |
H182 |
1.100 |
1.090 |
Bond Angles for JQN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
119.4 |
119.9 |
C1 |
C2 |
C7 |
119.8 |
119.9 |
C2 |
C1 |
H11C |
109.5 |
109.4 |
C2 |
C1 |
H12C |
109.4 |
109.5 |
C2 |
C1 |
H13C |
109.4 |
109.5 |
C3 |
C2 |
C7 |
120.8 |
120.2 |
C2 |
C3 |
C4 |
119.8 |
120.0 |
C2 |
C3 |
H3 |
120.1 |
120.0 |
C2 |
C7 |
C6 |
120.0 |
120.1 |
C2 |
C7 |
H7 |
120.0 |
120.0 |
C3 |
C4 |
C5 |
119.6 |
119.9 |
C4 |
C3 |
H3 |
120.1 |
120.0 |
C3 |
C4 |
H4 |
120.2 |
120.0 |
C4 |
C5 |
C6 |
120.3 |
119.8 |
C4 |
C5 |
S8 |
119.9 |
120.1 |
C5 |
C4 |
H4 |
120.2 |
120.1 |
C6 |
C5 |
S8 |
119.7 |
120.1 |
C5 |
C6 |
C7 |
119.5 |
119.9 |
C5 |
C6 |
H6 |
120.3 |
120.0 |
C5 |
S8 |
C9 |
105.1 |
103.0 |
C6 |
C7 |
H7 |
120.0 |
119.9 |
C7 |
C6 |
H6 |
120.2 |
120.0 |
S8 |
C9 |
C10 |
107.5 |
109.5 |
S8 |
C9 |
H91C |
110.0 |
109.5 |
S8 |
C9 |
H92C |
110.0 |
109.5 |
C9 |
C10 |
O11 |
118.7 |
120.0 |
C9 |
C10 |
C12 |
122.6 |
120.0 |
C10 |
C9 |
H91C |
110.0 |
109.5 |
C10 |
C9 |
H92C |
110.0 |
109.4 |
O11 |
C10 |
C12 |
118.7 |
120.0 |
C10 |
C12 |
C13 |
121.5 |
120.3 |
C10 |
C12 |
C17 |
118.8 |
120.3 |
C13 |
C12 |
C17 |
119.6 |
119.4 |
C12 |
C13 |
C14 |
120.4 |
120.4 |
C12 |
C13 |
H13 |
119.8 |
119.8 |
C12 |
C17 |
C16 |
119.7 |
119.6 |
C12 |
C17 |
H17 |
120.2 |
120.1 |
C13 |
C14 |
C15 |
120.1 |
120.5 |
C14 |
C13 |
H13 |
119.8 |
119.9 |
C13 |
C14 |
H14 |
120.0 |
119.7 |
C14 |
C15 |
C16 |
119.6 |
119.2 |
C14 |
C15 |
N21 |
130.5 |
130.6 |
C15 |
C14 |
H14 |
120.0 |
119.8 |
C16 |
C15 |
N21 |
109.8 |
110.2 |
C15 |
C16 |
C17 |
120.6 |
120.9 |
C15 |
C16 |
C18 |
106.7 |
106.3 |
C15 |
N21 |
C19 |
112.1 |
112.4 |
C15 |
N21 |
H21 |
123.9 |
123.7 |
C17 |
C16 |
C18 |
132.7 |
132.8 |
C16 |
C17 |
H17 |
120.2 |
120.2 |
C16 |
C18 |
C19 |
103.3 |
104.0 |
C16 |
C18 |
H181 |
111.0 |
110.6 |
C16 |
C18 |
H182 |
111.0 |
110.5 |
C18 |
C19 |
O20 |
126.4 |
126.5 |
C18 |
C19 |
N21 |
108.0 |
107.1 |
C19 |
C18 |
H181 |
110.9 |
110.6 |
C19 |
C18 |
H182 |
111.0 |
110.5 |
O20 |
C19 |
N21 |
125.7 |
126.4 |
C19 |
N21 |
H21 |
124.0 |
123.9 |
H11C |
C1 |
H12C |
109.5 |
109.5 |
H11C |
C1 |
H13C |
109.5 |
109.4 |
H12C |
C1 |
H13C |
109.5 |
109.5 |
H91C |
C9 |
H92C |
109.5 |
109.4 |
H181 |
C18 |
H182 |
109.5 |
110.6 |
Torsion Angles for JQN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C2 |
C1 |
C7 |
181.1 |
180.3 |
C1 |
C2 |
C3 |
C4 |
177.9 |
180.0 |
C1 |
C2 |
C3 |
H3 |
357.9 |
360.0 |
C1 |
C2 |
C7 |
C6 |
182.3 |
179.8 |
C1 |
C2 |
C7 |
H7 |
2.3 |
0.1 |
H11C |
C1 |
C2 |
H12C |
240.0 |
239.9 |
H11C |
C1 |
C2 |
H13C |
120.0 |
119.9 |
H12C |
C1 |
C2 |
H13C |
240.0 |
240.0 |
C1 |
C2 |
C3 |
C7 |
178.9 |
179.7 |
C3 |
C2 |
C1 |
H11C |
90.6 |
90.0 |
C3 |
C2 |
C1 |
H12C |
210.5 |
210.0 |
C3 |
C2 |
C1 |
H13C |
330.5 |
330.1 |
C3 |
C2 |
C7 |
C6 |
1.2 |
359.4 |
C3 |
C2 |
C7 |
H7 |
181.1 |
179.8 |
C2 |
C3 |
C4 |
C5 |
0.7 |
0.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
180.7 |
180.0 |
C1 |
C2 |
C7 |
C3 |
181.1 |
180.3 |
C7 |
C2 |
C1 |
H11C |
269.4 |
269.6 |
C7 |
C2 |
C1 |
H12C |
29.4 |
29.7 |
C7 |
C2 |
C1 |
H13C |
149.4 |
149.7 |
C7 |
C2 |
C3 |
C4 |
359.0 |
0.3 |
C7 |
C2 |
C3 |
H3 |
179.1 |
180.3 |
C5 |
C6 |
C7 |
C2 |
358.9 |
0.6 |
C6 |
C7 |
C2 |
H7 |
180.0 |
179.7 |
C2 |
C7 |
C6 |
H6 |
178.9 |
180.3 |
C4 |
C3 |
C2 |
C7 |
359.0 |
0.3 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
359.3 |
360.0 |
C3 |
C4 |
C5 |
S8 |
179.5 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
H3 |
180.7 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
S8 |
179.7 |
180.0 |
C4 |
C5 |
C6 |
C7 |
0.9 |
359.7 |
C4 |
C5 |
C6 |
H6 |
180.9 |
180.0 |
C4 |
C5 |
S8 |
C9 |
71.2 |
180.0 |
C2 |
C7 |
C6 |
C5 |
358.9 |
0.6 |
C4 |
C5 |
C6 |
S8 |
180.3 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.3 |
180.0 |
C6 |
C5 |
S8 |
C9 |
251.4 |
360.0 |
C5 |
C6 |
C7 |
H7 |
178.9 |
180.2 |
C7 |
C6 |
C5 |
H6 |
180.0 |
179.7 |
C4 |
C5 |
S8 |
C6 |
179.7 |
180.0 |
S8 |
C5 |
C4 |
H4 |
359.6 |
0.0 |
S8 |
C5 |
C6 |
C7 |
180.6 |
179.7 |
S8 |
C5 |
C6 |
H6 |
0.6 |
0.0 |
C5 |
S8 |
C9 |
C10 |
51.2 |
180.0 |
C5 |
S8 |
C9 |
H91C |
170.8 |
300.0 |
C5 |
S8 |
C9 |
H92C |
291.5 |
60.0 |
C2 |
C7 |
C6 |
H7 |
180.0 |
180.3 |
C7 |
C6 |
C5 |
S8 |
180.6 |
179.7 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.3 |
S8 |
C9 |
C10 |
O11 |
270.2 |
360.0 |
S8 |
C9 |
C10 |
C12 |
90.1 |
180.0 |
C10 |
C9 |
S8 |
H91C |
240.3 |
239.9 |
C10 |
C9 |
S8 |
H92C |
119.7 |
120.0 |
H91C |
C9 |
S8 |
H92C |
239.4 |
240.0 |
S8 |
C9 |
C10 |
H91C |
119.7 |
120.0 |
S8 |
C9 |
C10 |
H92C |
240.3 |
240.0 |
O11 |
C10 |
C9 |
C12 |
180.1 |
180.0 |
C9 |
C10 |
C12 |
C13 |
345.3 |
-0.0 |
C9 |
C10 |
C12 |
C17 |
165.8 |
179.7 |
H91C |
C9 |
C10 |
H92C |
120.6 |
119.9 |
C9 |
C10 |
O11 |
C12 |
179.9 |
180.0 |
O11 |
C10 |
C9 |
H91C |
150.6 |
240.0 |
O11 |
C10 |
C9 |
H92C |
29.9 |
120.0 |
O11 |
C10 |
C12 |
C13 |
165.1 |
180.0 |
O11 |
C10 |
C12 |
C17 |
345.6 |
359.7 |
C9 |
C10 |
C12 |
O11 |
180.1 |
180.0 |
C12 |
C10 |
C9 |
H91C |
330.4 |
60.0 |
C12 |
C10 |
C9 |
H92C |
209.8 |
300.0 |
C13 |
C12 |
C10 |
C17 |
179.5 |
180.3 |
C10 |
C12 |
C13 |
C14 |
180.0 |
180.0 |
C10 |
C12 |
C13 |
H13 |
360.0 |
360.0 |
C10 |
C12 |
C17 |
C16 |
180.1 |
179.7 |
C10 |
C12 |
C17 |
H17 |
0.1 |
0.0 |
C10 |
C12 |
C13 |
C17 |
180.5 |
179.7 |
C13 |
C12 |
C17 |
C16 |
0.5 |
359.4 |
C13 |
C12 |
C17 |
H17 |
180.6 |
179.8 |
C12 |
C13 |
C14 |
C15 |
0.7 |
0.0 |
C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
C12 |
C13 |
C14 |
H14 |
180.7 |
180.0 |
C10 |
C12 |
C17 |
C13 |
179.5 |
180.3 |
C17 |
C12 |
C13 |
C14 |
359.5 |
0.2 |
C17 |
C12 |
C13 |
H13 |
179.5 |
180.3 |
C15 |
C16 |
C17 |
C12 |
359.2 |
0.6 |
C12 |
C17 |
C16 |
C18 |
178.5 |
180.1 |
C16 |
C17 |
C12 |
H17 |
180.0 |
179.7 |
C14 |
C13 |
C12 |
C17 |
359.5 |
0.2 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
C16 |
359.0 |
360.0 |
C13 |
C14 |
C15 |
N21 |
183.7 |
180.0 |
C15 |
C14 |
C13 |
H14 |
180.0 |
180.0 |
C15 |
C14 |
C13 |
H13 |
180.7 |
180.0 |
C13 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
N21 |
175.3 |
180.0 |
C14 |
C15 |
C16 |
C17 |
1.0 |
359.7 |
C14 |
C15 |
C16 |
C18 |
181.6 |
180.0 |
C14 |
C15 |
N21 |
C19 |
176.4 |
180.0 |
C14 |
C15 |
N21 |
H21 |
356.4 |
-0.0 |
C12 |
C17 |
C16 |
C15 |
359.2 |
0.6 |
C14 |
C15 |
C16 |
N21 |
183.8 |
180.0 |
C16 |
C15 |
C14 |
H14 |
179.0 |
180.0 |
C16 |
C15 |
N21 |
C19 |
0.7 |
360.0 |
C16 |
C15 |
N21 |
H21 |
180.7 |
180.0 |
C17 |
C16 |
C15 |
C18 |
179.4 |
179.6 |
C15 |
C16 |
C17 |
H17 |
179.2 |
180.3 |
C15 |
C16 |
C18 |
C19 |
2.7 |
359.9 |
C15 |
C16 |
C18 |
H181 |
121.7 |
118.6 |
C15 |
C16 |
C18 |
H182 |
243.7 |
241.3 |
C14 |
C15 |
N21 |
C16 |
175.7 |
180.0 |
N21 |
C15 |
C14 |
H14 |
3.7 |
-0.0 |
N21 |
C15 |
C16 |
C17 |
177.2 |
179.7 |
N21 |
C15 |
C16 |
C18 |
357.8 |
0.1 |
C18 |
C19 |
N21 |
C15 |
1.1 |
360.0 |
O20 |
C19 |
N21 |
C15 |
181.4 |
180.0 |
C19 |
N21 |
C15 |
H21 |
180.0 |
180.0 |
C12 |
C17 |
C16 |
H17 |
180.0 |
180.3 |
C17 |
C16 |
C15 |
N21 |
177.2 |
179.7 |
C15 |
C16 |
C17 |
C18 |
180.8 |
180.5 |
C17 |
C16 |
C18 |
C19 |
183.4 |
180.4 |
C17 |
C16 |
C18 |
H181 |
302.4 |
299.0 |
C17 |
C16 |
C18 |
H182 |
64.4 |
61.8 |
C18 |
C16 |
C15 |
N21 |
357.8 |
0.1 |
C15 |
C16 |
C18 |
C17 |
179.3 |
179.6 |
C18 |
C16 |
C17 |
H17 |
358.4 |
359.8 |
C16 |
C18 |
C19 |
O20 |
177.3 |
180.0 |
C16 |
C18 |
C19 |
N21 |
357.7 |
0.0 |
C19 |
C18 |
C16 |
H181 |
241.0 |
241.3 |
C19 |
C18 |
C16 |
H182 |
119.0 |
118.6 |
H181 |
C18 |
C16 |
H182 |
238.0 |
237.3 |
C15 |
N21 |
C19 |
C18 |
1.1 |
360.0 |
C16 |
C18 |
C19 |
H181 |
119.0 |
118.7 |
C16 |
C18 |
C19 |
H182 |
241.0 |
241.4 |
O20 |
C19 |
C18 |
N21 |
179.7 |
180.0 |
C18 |
C19 |
N21 |
H21 |
181.1 |
180.0 |
H181 |
C18 |
C19 |
H182 |
122.0 |
122.7 |
C15 |
N21 |
C19 |
O20 |
181.4 |
180.0 |
C18 |
C19 |
O20 |
N21 |
180.4 |
180.0 |
O20 |
C19 |
C18 |
H181 |
58.3 |
61.4 |
O20 |
C19 |
C18 |
H182 |
296.4 |
298.6 |
O20 |
C19 |
N21 |
H21 |
1.4 |
-0.0 |
C15 |
N21 |
C19 |
H21 |
180.0 |
180.0 |
C18 |
C19 |
N21 |
O20 |
179.7 |
180.0 |
N21 |
C19 |
C18 |
H181 |
238.7 |
241.4 |
N21 |
C19 |
C18 |
H182 |
116.7 |
118.6 |
H11C |
C1 |
C2 |
C3 |
90.6 |
90.0 |
H11C |
C1 |
C2 |
C7 |
269.4 |
269.6 |
C2 |
C1 |
H11C |
H12C |
120.0 |
120.0 |
C2 |
C1 |
H11C |
H13C |
240.0 |
240.0 |
H12C |
C1 |
H11C |
H13C |
120.0 |
120.0 |
H12C |
C1 |
C2 |
C3 |
210.5 |
210.0 |
H12C |
C1 |
C2 |
C7 |
29.4 |
29.7 |
C2 |
C1 |
H12C |
H11C |
240.0 |
240.0 |
C2 |
C1 |
H12C |
H13C |
120.0 |
120.0 |
H11C |
C1 |
H12C |
H13C |
240.0 |
240.0 |
H13C |
C1 |
C2 |
C3 |
330.5 |
330.1 |
H13C |
C1 |
C2 |
C7 |
149.4 |
149.7 |
C2 |
C1 |
H13C |
H11C |
120.0 |
119.9 |
C2 |
C1 |
H13C |
H12C |
240.0 |
239.9 |
H11C |
C1 |
H13C |
H12C |
120.0 |
120.0 |
H3 |
C3 |
C2 |
C7 |
179.1 |
180.3 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
C5 |
180.7 |
180.0 |
H3 |
C3 |
C4 |
H4 |
0.7 |
360.0 |
C2 |
C7 |
H7 |
C6 |
180.0 |
179.7 |
H7 |
C7 |
C6 |
H6 |
358.9 |
359.9 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
0.7 |
360.0 |
H4 |
C4 |
C5 |
C6 |
179.3 |
180.0 |
H4 |
C4 |
C5 |
S8 |
359.6 |
0.0 |
H6 |
C6 |
C5 |
S8 |
0.6 |
0.0 |
C5 |
C6 |
H6 |
C7 |
180.0 |
179.7 |
H6 |
C6 |
C7 |
H7 |
358.9 |
359.9 |
S8 |
C9 |
H91C |
C10 |
241.9 |
239.9 |
S8 |
C9 |
H91C |
H92C |
120.9 |
120.0 |
H91C |
C9 |
C10 |
O11 |
150.6 |
240.0 |
H91C |
C9 |
C10 |
C12 |
330.4 |
60.0 |
C10 |
C9 |
H91C |
H92C |
239.1 |
240.1 |
S8 |
C9 |
H92C |
C10 |
118.2 |
120.0 |
S8 |
C9 |
H92C |
H91C |
239.1 |
240.0 |
H92C |
C9 |
C10 |
O11 |
29.9 |
120.0 |
H92C |
C9 |
C10 |
C12 |
209.8 |
300.0 |
C10 |
C9 |
H92C |
H91C |
120.9 |
120.0 |
H13 |
C13 |
C12 |
C17 |
179.5 |
180.3 |
C12 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
H13 |
C13 |
C14 |
C15 |
180.7 |
180.0 |
H13 |
C13 |
C14 |
H14 |
0.7 |
360.0 |
C12 |
C17 |
H17 |
C16 |
180.0 |
179.7 |
H17 |
C17 |
C16 |
C18 |
358.4 |
359.8 |
C13 |
C14 |
H14 |
C15 |
180.0 |
180.0 |
H14 |
C14 |
C13 |
H13 |
0.7 |
360.0 |
H14 |
C14 |
C15 |
C16 |
179.0 |
180.0 |
H14 |
C14 |
C15 |
N21 |
3.7 |
360.0 |
C15 |
N21 |
H21 |
C19 |
180.0 |
180.0 |
C16 |
C18 |
H181 |
C19 |
245.7 |
245.4 |
C16 |
C18 |
H181 |
H182 |
122.9 |
122.7 |
H181 |
C18 |
C19 |
O20 |
58.3 |
61.4 |
H181 |
C18 |
C19 |
N21 |
238.7 |
241.4 |
C19 |
C18 |
H181 |
H182 |
237.2 |
237.3 |
C16 |
C18 |
H182 |
C19 |
114.3 |
114.5 |
C16 |
C18 |
H182 |
H181 |
237.1 |
237.3 |
H182 |
C18 |
C19 |
O20 |
296.4 |
298.6 |
H182 |
C18 |
C19 |
N21 |
116.7 |
118.6 |
C19 |
C18 |
H182 |
H181 |
122.8 |
122.7 |