PDB Chemical Component JQ4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JQ4
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C08 |
C07 |
1.538 |
1.533 |
| C08 |
C09 |
1.499 |
1.545 |
| C07 |
C13 |
1.536 |
1.533 |
| C07 |
N06 |
1.462 |
1.477 |
| C13 |
C12 |
1.511 |
1.530 |
| O16 |
S14 |
1.390 |
1.421 |
| C09 |
C10 |
1.483 |
1.531 |
| O15 |
S14 |
1.394 |
1.420 |
| C12 |
C10 |
1.519 |
1.531 |
| N06 |
S14 |
1.616 |
1.656 |
| N06 |
C05 |
1.442 |
1.476 |
| S14 |
C17 |
1.677 |
1.814 |
| C10 |
C05 |
1.609 |
1.536 |
| C10 |
O11 |
1.399 |
1.428 |
| C05 |
C03 |
1.557 |
1.531 |
| O04 |
C03 |
1.420 |
1.429 |
| C03 |
C02 |
1.521 |
1.530 |
| C02 |
C01 |
1.486 |
1.529 |
| C13 |
H131 |
1.099 |
1.090 |
| C13 |
H132 |
1.100 |
1.091 |
| C17 |
H171 |
1.100 |
1.089 |
| C17 |
H173 |
1.100 |
1.090 |
| C17 |
H172 |
1.100 |
1.090 |
| C01 |
H013 |
1.100 |
1.090 |
| C01 |
H011 |
1.100 |
1.090 |
| C01 |
H012 |
1.099 |
1.090 |
| C02 |
H022 |
1.100 |
1.090 |
| C02 |
H021 |
1.100 |
1.090 |
| C03 |
H031 |
1.100 |
1.090 |
| O04 |
H041 |
0.950 |
0.968 |
| C05 |
H051 |
1.100 |
1.090 |
| C07 |
H071 |
1.100 |
1.090 |
| C08 |
H082 |
1.100 |
1.090 |
| C08 |
H081 |
1.100 |
1.090 |
| C09 |
H091 |
1.100 |
1.090 |
| C09 |
H092 |
1.100 |
1.090 |
| O11 |
H111 |
0.949 |
0.966 |
| C12 |
H122 |
1.100 |
1.090 |
| C12 |
H121 |
1.100 |
1.089 |
Bond Angles for JQ4
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C08 |
C07 |
H071 |
111.2 |
110.9 |
| C09 |
C08 |
H082 |
108.6 |
109.0 |
| C09 |
C08 |
H081 |
108.6 |
109.6 |
| C08 |
C09 |
H091 |
110.0 |
109.4 |
| C08 |
C09 |
H092 |
109.9 |
109.4 |
| C07 |
C13 |
C12 |
110.1 |
109.6 |
| C07 |
C13 |
H131 |
109.3 |
109.5 |
| C07 |
C13 |
H132 |
109.3 |
109.5 |
| C07 |
N06 |
S14 |
115.0 |
122.1 |
| C12 |
C13 |
H131 |
109.3 |
109.4 |
| C12 |
C13 |
H132 |
109.3 |
109.4 |
| C13 |
C12 |
H122 |
110.0 |
109.4 |
| C13 |
C12 |
H121 |
110.0 |
109.4 |
| C09 |
C10 |
O11 |
115.0 |
109.6 |
| N06 |
C05 |
H051 |
108.0 |
110.1 |
| S14 |
C17 |
H171 |
109.5 |
109.5 |
| S14 |
C17 |
H173 |
109.5 |
109.5 |
| S14 |
C17 |
H172 |
109.5 |
109.5 |
| C05 |
C10 |
O11 |
110.9 |
109.7 |
| C10 |
C05 |
C03 |
116.4 |
110.0 |
| C10 |
C05 |
H051 |
106.1 |
110.0 |
| C10 |
O11 |
H111 |
109.5 |
114.1 |
| C05 |
C03 |
H031 |
107.9 |
109.5 |
| O04 |
C03 |
H031 |
109.7 |
109.5 |
| C03 |
C02 |
H022 |
110.0 |
109.4 |
| C03 |
C02 |
H021 |
110.0 |
109.4 |
| C02 |
C01 |
H013 |
109.5 |
109.5 |
| C02 |
C01 |
H011 |
109.4 |
109.4 |
| C02 |
C01 |
H012 |
109.5 |
109.5 |
| H131 |
C13 |
H132 |
109.5 |
109.4 |
| H171 |
C17 |
H173 |
109.4 |
109.5 |
| H171 |
C17 |
H172 |
109.5 |
109.5 |
| H173 |
C17 |
H172 |
109.5 |
109.4 |
| H013 |
C01 |
H011 |
109.5 |
109.5 |
| H013 |
C01 |
H012 |
109.5 |
109.5 |
| H011 |
C01 |
H012 |
109.5 |
109.5 |
| H022 |
C02 |
H021 |
109.5 |
109.5 |
| H082 |
C08 |
H081 |
109.5 |
109.5 |
| H091 |
C09 |
H092 |
109.5 |
109.4 |
| H122 |
C12 |
H121 |
109.5 |
109.3 |
Torsion Angles for JQ4
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C08 |
C07 |
C13 |
C12 |
321.6 |
299.6 |
| C08 |
C07 |
C13 |
H131 |
81.7 |
59.6 |
| C08 |
C07 |
C13 |
H132 |
201.6 |
179.5 |
| C08 |
C07 |
N06 |
S14 |
194.9 |
238.7 |
| C09 |
C08 |
C07 |
H071 |
187.2 |
182.6 |
| C08 |
C09 |
C10 |
O11 |
188.2 |
180.8 |
| H082 |
C08 |
C09 |
H081 |
119.0 |
119.8 |
| H091 |
C09 |
C08 |
H092 |
239.4 |
119.8 |
| C12 |
C13 |
C07 |
H131 |
239.9 |
240.0 |
| C12 |
C13 |
C07 |
H132 |
120.1 |
120.0 |
| C07 |
C13 |
C12 |
H122 |
91.7 |
240.5 |
| C07 |
C13 |
C12 |
H121 |
212.5 |
120.8 |
| H131 |
C13 |
C07 |
H132 |
240.2 |
240.0 |
| N06 |
C07 |
C13 |
C12 |
81.0 |
56.5 |
| N06 |
C07 |
C13 |
H131 |
201.1 |
176.5 |
| N06 |
C07 |
C13 |
H132 |
320.9 |
296.4 |
| C07 |
N06 |
C05 |
H051 |
110.0 |
119.4 |
| C07 |
C13 |
C12 |
H131 |
120.1 |
120.0 |
| C07 |
C13 |
C12 |
H132 |
239.9 |
239.9 |
| H131 |
C13 |
C12 |
H132 |
119.8 |
119.9 |
| H122 |
C12 |
C13 |
H121 |
239.3 |
119.7 |
| O16 |
S14 |
C17 |
H171 |
180.0 |
308.4 |
| O16 |
S14 |
C17 |
H173 |
300.0 |
68.4 |
| O16 |
S14 |
C17 |
H172 |
60.0 |
188.4 |
| C05 |
C10 |
C09 |
O11 |
236.3 |
239.9 |
| C09 |
C10 |
C05 |
H051 |
187.7 |
180.3 |
| C09 |
C10 |
O11 |
H111 |
180.0 |
60.3 |
| O15 |
S14 |
C17 |
H171 |
303.0 |
171.6 |
| O15 |
S14 |
C17 |
H173 |
63.0 |
291.6 |
| O15 |
S14 |
C17 |
H172 |
183.0 |
51.6 |
| C12 |
C10 |
C05 |
H051 |
300.3 |
300.1 |
| C12 |
C10 |
O11 |
H111 |
62.4 |
299.7 |
| S14 |
N06 |
C05 |
H051 |
334.1 |
299.3 |
| N06 |
S14 |
C17 |
H171 |
59.0 |
60.0 |
| N06 |
S14 |
C17 |
H173 |
179.0 |
180.0 |
| N06 |
S14 |
C17 |
H172 |
299.0 |
300.0 |
| N06 |
C05 |
C10 |
O11 |
180.0 |
179.6 |
| C10 |
C05 |
N06 |
H051 |
242.6 |
240.6 |
| N06 |
C05 |
C03 |
H031 |
297.2 |
289.3 |
| H171 |
C17 |
S14 |
H173 |
240.0 |
240.0 |
| H171 |
C17 |
S14 |
H172 |
120.0 |
120.0 |
| H173 |
C17 |
S14 |
H172 |
240.0 |
240.0 |
| C09 |
C10 |
C05 |
O11 |
126.2 |
120.1 |
| N06 |
C05 |
C10 |
H051 |
118.5 |
119.4 |
| C05 |
C10 |
O11 |
H111 |
301.7 |
180.0 |
| C10 |
C05 |
C03 |
H031 |
170.0 |
172.0 |
| O11 |
C10 |
C05 |
C03 |
303.1 |
298.9 |
| O11 |
C10 |
C05 |
H051 |
61.4 |
60.2 |
| C03 |
C05 |
C10 |
O11 |
303.1 |
298.9 |
| C10 |
C05 |
C03 |
H051 |
118.1 |
121.3 |
| O04 |
C03 |
C05 |
H031 |
120.6 |
120.0 |
| C05 |
C03 |
C02 |
H022 |
186.3 |
53.3 |
| C05 |
C03 |
C02 |
H021 |
307.1 |
293.4 |
| C10 |
C05 |
C03 |
O04 |
290.6 |
292.0 |
| C05 |
C03 |
O04 |
H031 |
240.5 |
240.0 |
| O04 |
C03 |
C02 |
H022 |
309.0 |
173.4 |
| O04 |
C03 |
C02 |
H021 |
69.7 |
53.4 |
| C10 |
C05 |
C03 |
C02 |
52.6 |
52.1 |
| C03 |
C02 |
C01 |
H013 |
180.0 |
300.0 |
| C03 |
C02 |
C01 |
H011 |
300.0 |
60.0 |
| C03 |
C02 |
C01 |
H012 |
60.0 |
179.9 |
| H022 |
C02 |
C03 |
H021 |
239.3 |
119.9 |
| H013 |
C01 |
C02 |
H011 |
240.0 |
240.0 |
| H013 |
C01 |
C02 |
H012 |
120.0 |
120.1 |
| H011 |
C01 |
C02 |
H012 |
240.0 |
240.0 |
| C07 |
C13 |
H131 |
C12 |
239.4 |
239.9 |
| C07 |
C13 |
H131 |
H132 |
119.7 |
120.0 |
| C12 |
C13 |
H131 |
H132 |
240.3 |
240.1 |
| H131 |
C13 |
C12 |
H122 |
331.7 |
120.5 |
| H131 |
C13 |
C12 |
H121 |
92.4 |
0.7 |
| C07 |
C13 |
H132 |
C12 |
120.6 |
120.1 |
| C07 |
C13 |
H132 |
H131 |
240.3 |
240.0 |
| C12 |
C13 |
H132 |
H131 |
119.7 |
119.9 |
| H132 |
C13 |
C12 |
H122 |
211.8 |
0.6 |
| H132 |
C13 |
C12 |
H121 |
332.5 |
240.8 |
| S14 |
C17 |
H171 |
H173 |
120.0 |
120.0 |
| S14 |
C17 |
H171 |
H172 |
240.0 |
240.0 |
| H173 |
C17 |
H171 |
H172 |
120.0 |
120.0 |
| S14 |
C17 |
H173 |
H171 |
240.0 |
239.9 |
| S14 |
C17 |
H173 |
H172 |
120.0 |
120.0 |
| H171 |
C17 |
H173 |
H172 |
240.0 |
240.0 |
| S14 |
C17 |
H172 |
H171 |
120.0 |
120.0 |
| S14 |
C17 |
H172 |
H173 |
240.0 |
240.0 |
| H171 |
C17 |
H172 |
H173 |
120.0 |
120.0 |
| C02 |
C01 |
H013 |
H011 |
120.0 |
120.0 |
| C02 |
C01 |
H013 |
H012 |
240.0 |
240.0 |
| H011 |
C01 |
H013 |
H012 |
120.0 |
120.0 |
| C02 |
C01 |
H011 |
H013 |
240.0 |
240.0 |
| C02 |
C01 |
H011 |
H012 |
120.0 |
120.0 |
| H013 |
C01 |
H011 |
H012 |
240.0 |
239.9 |
| C02 |
C01 |
H012 |
H013 |
120.0 |
120.0 |
| C02 |
C01 |
H012 |
H011 |
240.0 |
240.0 |
| H013 |
C01 |
H012 |
H011 |
120.0 |
120.0 |
| C03 |
C02 |
H022 |
H021 |
121.0 |
240.1 |
| H022 |
C02 |
C01 |
H013 |
60.4 |
60.0 |
| H022 |
C02 |
C01 |
H011 |
180.4 |
180.0 |
| H022 |
C02 |
C01 |
H012 |
300.3 |
299.9 |
| C03 |
C02 |
H021 |
H022 |
239.0 |
119.9 |
| H021 |
C02 |
C01 |
H013 |
299.7 |
180.0 |
| H021 |
C02 |
C01 |
H011 |
59.6 |
300.0 |
| H021 |
C02 |
C01 |
H012 |
179.6 |
60.0 |
| H031 |
C03 |
C02 |
H022 |
69.2 |
293.3 |
| H031 |
C03 |
C02 |
H021 |
190.0 |
173.4 |
| H041 |
O04 |
C03 |
H031 |
299.5 |
222.7 |
| H051 |
C05 |
C10 |
O11 |
61.4 |
60.2 |
| C10 |
C05 |
H051 |
C03 |
235.3 |
238.7 |
| H051 |
C05 |
C03 |
H031 |
51.9 |
50.7 |
| H071 |
C07 |
C13 |
C12 |
201.3 |
177.5 |
| H071 |
C07 |
C13 |
H131 |
321.4 |
297.6 |
| H071 |
C07 |
C13 |
H132 |
81.2 |
57.5 |
| H071 |
C07 |
N06 |
S14 |
322.4 |
0.3 |
| H082 |
C08 |
C07 |
H071 |
307.7 |
302.2 |
| C09 |
C08 |
H082 |
H081 |
241.5 |
240.1 |
| H082 |
C08 |
C09 |
H091 |
340.6 |
119.4 |
| H082 |
C08 |
C09 |
H092 |
101.2 |
359.6 |
| H081 |
C08 |
C07 |
H071 |
66.6 |
62.2 |
| C09 |
C08 |
H081 |
H082 |
118.5 |
119.5 |
| H081 |
C08 |
C09 |
H091 |
221.6 |
359.5 |
| H081 |
C08 |
C09 |
H092 |
342.2 |
239.8 |
| H091 |
C09 |
C08 |
H082 |
340.6 |
119.4 |
| H091 |
C09 |
C08 |
H081 |
221.6 |
359.5 |
| C08 |
C09 |
H091 |
H092 |
120.8 |
240.2 |
| H091 |
C09 |
C10 |
O11 |
68.5 |
300.3 |
| H092 |
C09 |
C08 |
H082 |
101.2 |
359.6 |
| H092 |
C09 |
C08 |
H081 |
342.2 |
239.8 |
| C08 |
C09 |
H092 |
H091 |
239.1 |
119.8 |
| H092 |
C09 |
C10 |
O11 |
307.9 |
60.5 |
| H122 |
C12 |
C13 |
H131 |
331.7 |
120.5 |
| H122 |
C12 |
C13 |
H132 |
211.8 |
0.6 |
| C13 |
C12 |
H122 |
H121 |
121.0 |
240.2 |
| H121 |
C12 |
C13 |
H131 |
92.4 |
0.7 |
| H121 |
C12 |
C13 |
H132 |
332.5 |
240.8 |
| C13 |
C12 |
H121 |
H122 |
239.0 |
119.8 |