PDB Chemical Component JPS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JPS

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAA CAG 1.538 1.530
CAA CA0 1.532 1.530
CAA CA1 1.527 1.530
CAG CAH 1.540 1.530
CAH CAM 1.528 1.507
CAM CAI 1.346 1.330
CAM SAK 1.646 1.757
CAI CAN 1.355 1.392
SAK CAO 1.669 1.758
CAO CAN 1.397 1.346
CAO CAQ 1.494 1.515
CAN CAR 1.554 1.523
CAR CAL 1.529 1.506
CAR OAF 1.452 1.429
CAR CAJ 1.541 1.530
CAL OAC 1.232 1.208
CAL OAB 1.250 1.343
CAJ CAP 1.549 1.532
CAP OAD 1.439 1.429
CAP CAQ 1.521 1.533
CAQ OAE 1.448 1.429
CA0 CA1 1.511 1.530
CAA HAA 1.100 1.089
CAG HAG1 1.100 1.090
CAG HAG2 1.101 1.090
CA0 HA01 1.100 1.090
CA0 HA02 1.100 1.090
CA1 HA11 1.100 1.090
CA1 HA12 1.101 1.090
CAH HAH1 1.100 1.090
CAH HAH2 1.101 1.090
CAI HAI 1.080 1.080
CAQ HAQ 1.100 1.090
OAF HAF 0.950 0.967
CAJ HAJ1 1.100 1.090
CAJ HAJ2 1.100 1.090
OAB HAB 0.950 0.967
CAP HAP 1.100 1.090
OAD HAD 0.950 0.968
OAE HAE 0.950 0.967

Bond Angles for JPS

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CAG CAA CA0 115.5 117.4
CAG CAA CA1 115.9 117.5
CAA CAG CAH 114.1 109.4
CAG CAA HAA 95.0 115.6
CAA CAG HAG1 108.0 109.5
CAA CAG HAG2 106.9 109.5
CA0 CAA CA1 59.2 60.0
CAA CA0 CA1 60.2 60.0
CA0 CAA HAA 135.6 117.5
CAA CA0 HA01 130.8 117.6
CAA CA0 HA02 135.9 117.5
CAA CA1 CA0 60.6 60.0
CA1 CAA HAA 135.3 117.5
CAA CA1 HA11 130.6 117.5
CAA CA1 HA12 135.7 117.5
CAG CAH CAM 107.9 109.4
CAH CAG HAG1 107.9 109.5
CAH CAG HAG2 106.9 109.5
CAG CAH HAH1 110.0 109.5
CAG CAH HAH2 110.3 109.5
CAH CAM CAI 129.0 125.2
CAH CAM SAK 122.1 125.2
CAM CAH HAH1 110.0 109.5
CAM CAH HAH2 110.3 109.5
CAI CAM SAK 108.9 109.6
CAM CAI CAN 116.1 115.7
CAM CAI HAI 121.9 122.2
CAM SAK CAO 95.2 91.1
CAI CAN CAO 111.0 113.7
CAI CAN CAR 128.6 123.5
CAN CAI HAI 122.0 122.2
SAK CAO CAN 108.8 110.0
SAK CAO CAQ 127.0 125.2
CAN CAO CAQ 124.1 124.8
CAO CAN CAR 120.4 122.9
CAO CAQ CAP 112.5 108.7
CAO CAQ OAE 109.3 109.6
CAO CAQ HAQ 109.3 109.5
CAN CAR CAL 108.9 109.6
CAN CAR OAF 111.0 109.6
CAN CAR CAJ 111.5 108.8
CAL CAR OAF 105.6 109.6
CAL CAR CAJ 112.8 109.5
CAR CAL OAC 114.1 120.1
CAR CAL OAB 120.8 120.0
OAF CAR CAJ 106.8 109.7
CAR OAF HAF 109.5 114.0
CAR CAJ CAP 109.1 109.3
CAR CAJ HAJ1 109.6 109.5
CAR CAJ HAJ2 109.7 109.6
OAC CAL OAB 125.1 120.0
CAL OAB HAB 109.5 117.0
CAJ CAP OAD 109.2 109.6
CAJ CAP CAQ 111.4 108.8
CAP CAJ HAJ1 109.6 109.5
CAP CAJ HAJ2 109.7 109.5
CAJ CAP HAP 107.4 109.5
OAD CAP CAQ 106.3 109.5
OAD CAP HAP 112.4 109.6
CAP OAD HAD 109.5 114.0
CAP CAQ OAE 114.3 109.7
CAP CAQ HAQ 103.6 109.6
CAQ CAP HAP 110.2 109.8
OAE CAQ HAQ 107.3 109.7
CAQ OAE HAE 109.5 114.0
CA1 CA0 HA01 130.8 117.5
CA1 CA0 HA02 135.9 117.5
CA0 CA1 HA11 130.6 117.5
CA0 CA1 HA12 135.7 117.5
HAG1 CAG HAG2 113.2 109.5
HA01 CA0 HA02 74.9 115.5
HA11 CA1 HA12 75.1 115.5
HAH1 CAH HAH2 108.3 109.5
HAJ1 CAJ HAJ2 109.1 109.5

Torsion Angles for JPS

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CA0 CAA CAG CA1 66.5 68.6
CAG CAA CA0 CA1 253.8 252.5
CA0 CAA CAG HAA 213.2 214.3
CAG CAA CA0 HA01 13.8 0.0
CAG CAA CA0 HA02 127.1 145.0
CAG CAA CA1 CA0 105.5 107.4
CA1 CAA CAG HAA 146.7 145.7
CAG CAA CA1 HA11 225.6 215.0
CAG CAA CA1 HA12 338.8 360.0
CAA CAG CAH CAM 169.2 180.0
CAH CAG CAA HAG1 240.0 240.0
CAH CAG CAA HAG2 117.9 120.0
CAA CAG CAH HAH1 289.2 300.0
CAA CAG CAH HAH2 48.6 60.0
HAG1 CAG CAA HAG2 237.9 239.9
CA0 CAA CAG CAH 193.8 185.0
CAG CAA CA0 HAA 128.8 145.0
CA0 CAA CAG HAG1 313.8 305.0
CA0 CAA CAG HAG2 75.9 65.0
CA0 CAA CA1 CA0 360.0 -0.0
CA1 CAA CA0 HAA 235.0 252.5
CA0 CAA CA1 HA11 120.0 107.6
CA0 CAA CA1 HA12 233.2 252.5
CA1 CA0 CAA HA01 240.0 252.5
CA1 CA0 CAA HA02 126.7 107.5
CAA CA0 CA1 HA11 240.0 252.5
CAA CA0 CA1 HA12 126.7 107.5
HA01 CA0 CAA HA02 246.7 215.0
CA1 CAA CAG CAH 127.4 116.4
CAG CAA CA1 HAA 231.0 214.9
CA1 CAA CAG HAG1 247.4 236.4
CA1 CAA CAG HAG2 9.4 356.4
CA1 CAA CA0 CA1 360.0 360.0
CA0 CAA CA1 HAA 125.5 107.5
CA1 CAA CA0 HA01 120.0 107.5
CA1 CAA CA0 HA02 233.3 252.5
CAA CA1 CA0 HA01 240.0 252.5
CAA CA1 CA0 HA02 126.7 107.5
CA0 CA1 CAA HA11 240.0 252.4
CA0 CA1 CAA HA12 126.8 107.5
HA11 CA1 CAA HA12 246.8 215.0
CAH CAG CAA CA0 193.8 185.0
CAH CAG CAA CA1 127.4 116.4
CAH CAG CAA HAA 340.6 330.7
CAA CAG CAH HAG1 120.0 120.0
CAA CAG CAH HAG2 242.1 240.0
CAG CAH CAM CAI 241.7 90.0
CAG CAH CAM SAK 62.2 269.7
CAM CAH CAG HAH1 240.0 240.0
CAM CAH CAG HAH2 120.6 120.0
HAG1 CAG CAH HAG2 122.0 120.1
HAH1 CAH CAG HAH2 240.6 239.9
CAM CAH CAG HAG1 49.2 60.0
CAM CAH CAG HAG2 287.2 300.0
CAG CAH CAM HAH1 120.0 120.0
CAG CAH CAM HAH2 239.4 240.0
CAI CAM CAH SAK 179.5 180.3
CAH CAM CAI CAN 180.2 180.0
CAH CAM CAI HAI 0.2 0.0
CAH CAM SAK CAO 179.9 180.0
HAH1 CAH CAM HAH2 119.4 120.0
CAH CAM CAI SAK 180.5 179.7
CAI CAM CAH HAH1 121.7 330.0
CAI CAM CAH HAH2 2.3 210.0
CAI CAM SAK CAO 0.3 359.8
CAM CAI CAN CAO 0.0 359.9
CAM CAI CAN CAR 181.0 180.0
CAN CAI CAM HAI 180.0 179.9
CAH CAM SAK CAI 179.6 180.3
SAK CAM CAH HAH1 302.2 149.7
SAK CAM CAH HAH2 182.8 29.7
SAK CAM CAI CAN 359.8 0.2
SAK CAM CAI HAI 179.8 180.3
CAM SAK CAO CAN 359.7 0.2
CAM SAK CAO CAQ 176.8 180.0
CAN CAI CAM SAK 359.8 0.2
CAM CAI CAN HAI 180.0 180.1
SAK CAO CAN CAI 0.2 359.9
CAI CAN CAO CAQ 183.0 180.1
CAO CAN CAI CAR 179.0 179.9
CAI CAN CAR CAL 33.3 42.8
CAI CAN CAR OAF 277.5 282.4
CAI CAN CAR CAJ 158.5 162.5
CAI CAN CAO SAK 0.2 359.9
CAN CAO SAK CAQ 182.9 180.2
SAK CAO CAN CAR 179.3 179.8
SAK CAO CAQ CAP 168.8 163.7
SAK CAO CAQ OAE 40.6 43.9
SAK CAO CAQ HAQ 283.4 283.5
CAI CAN CAO CAR 180.9 180.1
CAO CAN CAI HAI 180.0 179.8
SAK CAO CAN CAQ 177.2 179.8
CAN CAO CAQ CAP 345.5 343.6
CAN CAO CAQ OAE 217.3 223.7
CAN CAO CAQ HAQ 100.1 103.3
CAO CAN CAR CAL 214.5 222.9
CAO CAN CAR OAF 98.6 102.5
CAO CAN CAR CAJ 339.6 342.6
SAK CAO CAQ CAN 183.3 180.2
CAQ CAO CAN CAR 2.0 360.0
CAJ CAP CAQ CAO 45.2 49.8
OAD CAP CAQ CAO 164.1 169.6
CAP CAQ CAO OAE 128.2 119.9
CAP CAQ CAO HAQ 245.4 240.3
CAO CAQ CAP HAP 286.1 289.9
OAE CAQ CAO HAQ 117.2 120.4
CAO CAQ OAE HAE 221.8 300.1
CAI CAN CAR CAO 178.9 179.9
CAR CAN CAI HAI 1.0 360.0
CAR CAN CAO CAQ 2.0 360.0
CAL CAR CAN OAF 115.9 120.4
CAL CAR CAN CAJ 234.9 240.3
CAN CAR CAL OAC 278.4 95.0
CAN CAR CAL OAB 98.9 274.9
OAF CAR CAN CAJ 119.0 119.9
CAN CAR OAF HAF 270.4 60.0
CAN CAR CAJ CAP 49.8 51.2
CAN CAR CAJ HAJ1 169.8 171.1
CAN CAR CAJ HAJ2 289.6 291.3
CAN CAR CAL OAF 240.7 239.7
CAN CAR CAL CAJ 124.3 119.2
OAF CAR CAL CAJ 243.6 239.6
CAL CAR OAF HAF 152.5 299.7
CAL CAR CAJ CAP 172.7 171.0
CAL CAR CAJ HAJ1 292.7 290.9
CAL CAR CAJ HAJ2 52.5 51.0
OAC CAL CAR OAB 179.5 180.1
CAR CAL OAB HAB 179.4 180.0
CAN CAR OAF CAL 117.9 120.3
CAN CAR OAF CAJ 238.3 240.7
CAL CAR OAF CAJ 120.4 120.3
OAF CAR CAL OAC 37.7 215.3
OAF CAR CAL OAB 218.2 35.3
OAF CAR CAJ CAP 288.4 291.3
OAF CAR CAJ HAJ1 48.4 51.3
OAF CAR CAJ HAJ2 168.2 171.4
CAN CAR CAJ CAL 237.1 240.3
CAN CAR CAJ OAF 121.5 119.9
CAL CAR CAJ OAF 244.4 239.6
CAJ CAR CAL OAC 154.0 335.8
CAJ CAR CAL OAB 334.6 155.7
CAJ CAR OAF HAF 32.1 179.4
CAR CAJ CAP OAD 178.6 169.6
CAR CAJ CAP CAQ 295.7 289.3
CAP CAJ CAR HAJ1 240.0 240.1
CAP CAJ CAR HAJ2 120.2 119.9
CAR CAJ CAP HAP 56.4 49.4
HAJ1 CAJ CAR HAJ2 240.2 239.9
OAC CAL CAR OAF 37.7 215.3
OAC CAL CAR CAJ 154.0 335.8
CAR CAL OAC OAB 180.6 179.9
OAC CAL OAB HAB 0.0 360.0
OAB CAL CAR OAF 218.2 35.3
OAB CAL CAR CAJ 334.6 155.7
CAR CAL OAB OAC 179.4 180.1
CAO CAQ CAP CAJ 45.2 49.8
CAR CAJ CAP HAJ1 120.0 119.9
CAR CAJ CAP HAJ2 239.8 240.0
OAD CAP CAJ CAQ 242.9 240.3
OAD CAP CAJ HAP 122.1 120.2
CAJ CAP OAD HAD 34.2 180.0
CAJ CAP CAQ OAE 170.7 169.6
CAJ CAP CAQ HAQ 287.2 290.2
CAQ CAP CAJ HAP 239.2 239.9
HAJ1 CAJ CAP HAJ2 119.8 120.0
CAO CAQ CAP OAD 164.1 169.6
CAJ CAP OAD CAQ 120.3 119.3
OAD CAP CAJ HAJ1 58.6 49.6
OAD CAP CAJ HAJ2 298.7 289.6
CAJ CAP OAD HAP 240.9 239.8
OAD CAP CAQ OAE 289.6 289.4
OAD CAP CAQ HAQ 46.1 49.9
CAQ CAP OAD HAP 120.7 120.5
CAO CAQ CAP OAE 234.5 240.2
CAO CAQ CAP HAQ 118.0 119.7
CAJ CAP CAQ OAD 241.2 240.2
CAQ CAP CAJ HAJ1 175.7 169.3
CAQ CAP CAJ HAJ2 55.8 49.3
CAJ CAP CAQ HAP 119.1 119.9
OAD CAP CAQ HAP 238.0 239.7
CAQ CAP OAD HAD 273.9 60.7
OAE CAQ CAP HAQ 243.5 239.5
CAP CAQ OAE HAE 94.6 180.8
CAO CAQ OAE CAP 127.2 119.2
CAO CAQ OAE HAQ 241.5 239.7
CAP CAQ OAE HAQ 114.4 120.5
OAE CAQ CAP HAP 51.6 49.7
CA1 CA0 CAA CA1 360.0 360.0
CA1 CA0 CAA HAA 125.0 107.5
CAA CA0 CA1 HA01 120.0 107.5
CAA CA0 CA1 HA02 233.3 252.5
CA0 CA1 CAA HAA 234.5 252.5
CAA CA1 CA0 HA11 120.0 107.5
CAA CA1 CA0 HA12 233.3 252.5
HA01 CA0 CA1 HA02 113.3 145.0
HA11 CA1 CA0 HA12 113.2 145.0
CAG CAA HAA CA0 224.9 214.3
CAG CAA HAA CA1 135.4 145.7
HAA CAA CAG CAH 340.6 330.7
HAA CAA CAG HAG1 100.6 90.6
HAA CAA CAG HAG2 222.7 210.7
CA0 CAA HAA CA1 270.5 291.4
HAA CAA CA0 CA1 125.0 107.5
HAA CAA CA0 HA01 245.0 215.0
HAA CAA CA0 HA02 358.3 0.0
HAA CAA CA1 CA0 234.5 252.5
HAA CAA CA1 HA11 354.6 0.1
HAA CAA CA1 HA12 107.8 145.0
HAG1 CAG CAA CA0 313.8 305.0
HAG1 CAG CAA CA1 247.4 236.4
CAA CAG HAG1 CAH 236.2 240.0
HAG1 CAG CAA HAA 100.6 90.6
CAA CAG HAG1 HAG2 118.1 120.0
HAG1 CAG CAH CAM 49.2 60.0
CAH CAG HAG1 HAG2 241.9 240.0
HAG1 CAG CAH HAH1 169.2 180.0
HAG1 CAG CAH HAH2 288.6 300.1
HAG2 CAG CAA CA0 75.9 65.0
HAG2 CAG CAA CA1 9.4 356.4
CAA CAG HAG2 CAH 122.6 119.9
HAG2 CAG CAA HAA 222.7 210.7
CAA CAG HAG2 HAG1 241.3 240.0
HAG2 CAG CAH CAM 287.2 300.0
CAH CAG HAG2 HAG1 118.7 120.0
HAG2 CAG CAH HAH1 47.2 59.9
HAG2 CAG CAH HAH2 166.6 180.0
HA01 CA0 CAA CA1 120.0 107.5
CAA CA0 HA01 CA1 277.0 291.3
HA01 CA0 CAA HAA 245.0 215.0
CAA CA0 HA01 HA02 138.5 145.7
CA1 CA0 HA01 HA02 221.5 214.3
HA01 CA0 CA1 HA11 120.0 145.0
HA01 CA0 CA1 HA12 6.7 360.0
HA02 CA0 CAA CA1 233.3 252.5
CAA CA0 HA02 CA1 92.2 68.6
HA02 CA0 CAA HAA 358.3 0.0
CAA CA0 HA02 HA01 226.1 214.3
CA1 CA0 HA02 HA01 133.9 145.7
HA02 CA0 CA1 HA11 6.7 360.0
HA02 CA0 CA1 HA12 253.4 215.0
CAA CA1 HA11 CA0 276.8 291.4
HA11 CA1 CAA HAA 354.6 0.1
CAA CA1 HA11 HA12 138.4 145.7
HA11 CA1 CA0 HA01 120.0 145.0
HA11 CA1 CA0 HA02 6.7 360.0
CA0 CA1 HA11 HA12 221.6 214.3
CAA CA1 HA12 CA0 92.4 68.6
HA12 CA1 CAA HAA 107.8 145.0
CAA CA1 HA12 HA11 226.2 214.3
HA12 CA1 CA0 HA01 6.7 360.0
HA12 CA1 CA0 HA02 253.4 215.0
CA0 CA1 HA12 HA11 133.8 145.7
CAG CAH HAH1 CAM 241.3 240.0
HAH1 CAH CAG HAG1 169.2 180.0
HAH1 CAH CAG HAG2 47.2 59.9
CAG CAH HAH1 HAH2 120.7 120.0
HAH1 CAH CAM CAI 121.7 330.0
HAH1 CAH CAM SAK 302.2 149.7
CAM CAH HAH1 HAH2 239.4 240.0
CAG CAH HAH2 CAM 119.1 119.9
HAH2 CAH CAG HAG1 288.6 300.1
HAH2 CAH CAG HAG2 166.6 180.0
CAG CAH HAH2 HAH1 239.6 240.0
HAH2 CAH CAM CAI 2.3 210.0
HAH2 CAH CAM SAK 182.8 29.7
CAM CAH HAH2 HAH1 120.4 120.0
HAI CAI CAM SAK 179.8 180.3
CAM CAI HAI CAN 180.0 179.9
HAI CAI CAN CAO 180.0 179.8
HAI CAI CAN CAR 1.0 360.0
CAO CAQ HAQ CAP 239.8 240.9
CAO CAQ HAQ OAE 118.4 120.4
CAP CAQ HAQ OAE 238.7 239.5
HAQ CAQ CAP HAP 168.1 170.3
HAQ CAQ OAE HAE 340.2 60.4
HAF OAF CAR CAJ 32.1 179.4
CAR CAJ HAJ1 CAP 240.3 240.2
CAR CAJ HAJ1 HAJ2 120.1 120.2
HAJ1 CAJ CAP OAD 58.6 49.6
HAJ1 CAJ CAP CAQ 175.7 169.3
CAP CAJ HAJ1 HAJ2 239.8 240.0
HAJ1 CAJ CAP HAP 296.5 289.4
CAR CAJ HAJ2 CAP 119.8 119.9
CAR CAJ HAJ2 HAJ1 239.9 239.9
HAJ2 CAJ CAP OAD 298.7 289.6
HAJ2 CAJ CAP CAQ 55.8 49.3
CAP CAJ HAJ2 HAJ1 120.1 120.0
HAJ2 CAJ CAP HAP 176.6 169.4
CAJ CAP HAP OAD 120.1 120.2
CAJ CAP HAP CAQ 238.5 240.5
HAP CAP CAJ HAJ1 296.5 289.4
HAP CAP CAJ HAJ2 176.6 169.4
OAD CAP HAP CAQ 118.4 120.3
HAP CAP OAD HAD 153.2 300.2
HAP CAP CAQ OAE 51.6 49.7
HAP CAP CAQ HAQ 168.1 170.3
HAD OAD CAP CAQ 273.9 60.7
HAD OAD CAP HAP 153.2 300.2
HAE OAE CAQ HAQ 340.2 60.4