PDB Chemical Component JPH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JPH

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAR	CAQ	1.390	1.380
CAR	CAS	1.385	1.388
CAX	OAY	1.422	1.432
CAX	CAW	1.488	1.534
OAY	CAS	1.368	1.361
CAQ	CAP	1.373	1.394
CAS	CAT	1.389	1.391
CAP	CAM	1.324	1.485
CAP	CAU	1.400	1.393
CAT	CAU	1.412	1.385
CAT	OAV	1.380	1.361
CAW	OAV	1.455	1.432
CAM	CAL	1.334	1.364
CAM	NAN	1.326	1.345
CAL	NAK	1.330	1.352
NAN	NAO	1.350	1.286
NAK	NAO	1.339	1.286
NAK	CAJ	1.439	1.465
CAJ	CAI	1.521	1.529
CAI	C2	1.425	1.507
N1	C2	1.432	1.307
N1	C6	1.409	1.345
C2	N3	1.369	1.346
O6	C6	1.227	1.222
C6	C5	1.396	1.415
N3	C4	1.350	1.362
C5	C4	1.414	1.353
C4	CAA	1.389	1.508
C5	H1	1.080	1.081
CAU	H3	1.080	1.080
CAW	H4	1.100	1.090
CAW	H5	1.100	1.090
CAX	H6	1.100	1.091
CAX	H7	1.100	1.090
CAR	H8	1.080	1.079
CAQ	H9	1.080	1.079
CAL	H10	1.080	1.080
CAJ	H11	1.100	1.090
CAJ	H12	1.100	1.090
CAI	H13	1.100	1.091
CAI	H14	1.100	1.090
CAA	H15	1.100	1.089
CAA	H16	1.100	1.090
CAA	H17	1.100	1.090
N3	H18	1.000	0.970

Bond Angles for JPH

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAR	CAQ	CAP	119.9	120.0
CAQ	CAR	H8	119.0	119.9
CAR	CAQ	H9	120.0	120.0
CAX	OAY	CAS	116.2	116.7
OAY	CAX	H6	110.6	109.7
OAY	CAX	H7	110.6	109.7
CAX	CAW	H4	109.8	109.7
CAX	CAW	H5	109.8	109.8
CAQ	CAP	CAM	117.1	120.1
CAP	CAQ	H9	120.1	120.0
CAP	CAM	CAL	124.0	126.9
CAP	CAM	NAN	125.5	126.9
CAP	CAU	H3	119.7	120.0
CAT	CAU	H3	119.7	120.0
CAL	CAM	NAN	110.4	106.2
CAM	CAL	NAK	107.5	106.1
CAM	CAL	H10	126.2	127.0
CAM	NAN	NAO	105.2	108.8
CAL	NAK	NAO	107.1	108.5
CAL	NAK	CAJ	126.8	125.8
NAK	CAL	H10	126.2	127.0
NAK	CAJ	CAI	108.7	109.5
NAK	CAJ	H11	109.7	109.5
NAK	CAJ	H12	109.7	109.4
CAJ	CAI	C2	109.3	109.5
CAI	CAJ	H11	109.7	109.5
CAI	CAJ	H12	109.7	109.5
CAJ	CAI	H13	109.5	109.5
CAJ	CAI	H14	109.5	109.5
N1	C2	CAI	118.3	119.3
C2	CAI	H13	109.5	109.4
C2	CAI	H14	109.5	109.5
C6	N1	C2	118.6	120.7
N1	C2	N3	120.3	121.5
N1	C6	C5	120.1	119.3
C2	N3	H18	119.8	119.7
C6	C5	H1	120.7	120.7
N3	C4	CAA	119.4	120.4
C4	N3	H18	119.7	119.7
C5	C4	CAA	118.6	120.4
C4	CAA	H15	109.5	109.5
C4	CAA	H16	109.5	109.4
C4	CAA	H17	109.5	109.4
H4	CAW	H5	109.5	109.7
H6	CAX	H7	109.5	109.7
H11	CAJ	H12	109.5	109.5
H13	CAI	H14	109.5	109.5
H15	CAA	H16	109.5	109.5
H15	CAA	H17	109.4	109.5
H16	CAA	H17	109.5	109.5

Torsion Angles for JPH

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAR	CAQ	CAP	CAM	179.9	180.1
CAP	CAQ	CAR	H9	180.0	179.7
OAY	CAX	CAW	H4	56.3	180.5
OAY	CAX	CAW	H5	176.7	59.9
H6	CAX	OAY	H7	238.5	120.6
H4	CAW	CAX	H5	239.6	120.6
CAS	OAY	CAX	H6	175.7	286.6
CAS	OAY	CAX	H7	297.2	166.0
CAP	CAQ	CAR	H8	181.0	180.0
CAR	CAQ	CAP	H9	180.0	180.3
CAQ	CAP	CAM	CAL	29.7	5.0
CAQ	CAP	CAM	NAN	209.0	184.7
CAQ	CAP	CAU	H3	180.2	179.7
CAS	CAT	CAU	H3	180.6	179.9
CAM	CAP	CAQ	H9	359.9	359.8
CAM	CAP	CAU	H3	359.2	0.2
CAL	CAM	CAP	NAN	180.7	180.3
CAP	CAM	CAL	NAK	178.8	180.0
CAP	CAM	CAL	H10	358.8	360.0
CAP	CAM	NAN	NAO	180.4	180.0
CAT	CAU	CAP	H3	180.0	179.8
CAP	CAU	CAT	H3	180.0	180.2
OAV	CAT	CAU	H3	359.6	359.8
CAP	CAM	CAL	NAN	179.4	179.7
CAL	CAM	NAN	NAO	359.8	359.7
CAM	CAL	NAK	NAO	1.1	359.9
CAM	CAL	NAK	CAJ	179.4	180.0
NAK	CAL	CAM	H10	180.0	180.0
CAP	CAM	NAN	CAL	180.6	180.3
NAN	CAM	CAL	NAK	359.4	0.2
NAN	CAM	CAL	H10	179.4	180.2
NAK	CAL	CAM	NAN	359.4	0.2
CAM	CAL	NAK	H10	180.0	180.0
CAL	NAK	CAJ	CAI	139.4	125.0
CAL	NAK	CAJ	H11	259.3	245.0
CAL	NAK	CAJ	H12	19.5	5.0
CAL	NAK	NAO	NAN	358.7	360.0
CAL	NAK	NAO	CAJ	178.3	180.1
NAO	NAK	CAL	H10	181.1	179.9
CAL	NAK	CAJ	NAO	182.0	179.8
CAJ	NAK	CAL	H10	359.5	360.0
NAK	CAJ	CAI	C2	263.4	180.0
CAI	CAJ	NAK	H11	240.1	240.0
CAI	CAJ	NAK	H12	119.9	120.0
NAK	CAJ	CAI	H13	23.4	300.0
NAK	CAJ	CAI	H14	143.4	60.0
H11	CAJ	NAK	H12	239.8	240.0
NAK	CAJ	CAI	H11	119.9	120.0
NAK	CAJ	CAI	H12	240.1	240.0
N1	C2	CAI	CAJ	319.7	360.0
C2	CAI	CAJ	H13	240.0	240.1
C2	CAI	CAJ	H14	120.0	120.0
H11	CAJ	CAI	H12	120.3	120.0
H13	CAI	CAJ	H14	239.9	240.0
C2	CAI	CAJ	H11	143.5	60.0
C2	CAI	CAJ	H12	23.3	300.0
CAJ	CAI	C2	H13	120.0	120.0
CAJ	CAI	C2	H14	240.1	240.0
C6	N1	C2	CAI	181.7	180.0
N1	C2	CAI	N3	178.9	180.0
CAI	C2	N3	H18	358.5	360.0
H13	CAI	C2	H14	120.1	120.0
CAJ	CAI	C2	N1	319.7	360.0
N1	C2	CAI	H13	199.8	240.0
N1	C2	CAI	H14	79.7	120.0
C2	N1	C6	C5	359.0	0.0
N1	C2	N3	H18	179.6	180.0
C6	N1	C2	N3	0.6	360.0
N1	C6	C5	H1	181.2	180.0
N1	C2	N3	CAI	181.1	180.0
C2	N3	C4	CAA	179.0	180.0
C4	N3	C2	H18	180.0	180.0
O6	C6	C5	H1	1.3	0.1
C5	C6	N1	C2	359.0	0.0
C6	C5	C4	CAA	180.6	180.0
N1	C2	N3	C4	359.6	360.0
C2	N3	C4	H18	180.0	180.0
C5	C4	N3	CAA	181.7	180.0
N3	C4	CAA	H15	180.0	90.0
N3	C4	CAA	H16	300.0	210.0
N3	C4	CAA	H17	60.0	330.0
N1	C6	C5	C4	1.2	360.0
N3	C4	C5	CAA	178.3	180.0
C5	C4	N3	H18	180.7	180.0
C5	C4	CAA	H15	358.4	270.0
C5	C4	CAA	H16	118.4	30.0
C5	C4	CAA	H17	238.4	150.0
CAA	C4	N3	H18	359.0	360.0
H15	CAA	C4	H16	240.0	240.0
H15	CAA	C4	H17	120.0	120.0
H16	CAA	C4	H17	240.0	240.0
H1	C5	C4	CAA	0.6	360.0
CAX	CAW	H4	H5	120.5	239.4
CAX	CAW	H5	H4	239.5	120.6
H6	CAX	OAY	CAS	175.7	286.6
OAY	CAX	H6	H7	122.2	239.4
H6	CAX	CAW	H4	297.1	300.2
H6	CAX	CAW	H5	57.4	179.6
H7	CAX	OAY	CAS	297.2	166.0
OAY	CAX	H7	H6	237.8	120.6
H7	CAX	CAW	H4	175.6	60.8
H7	CAX	CAW	H5	295.9	300.2
H8	CAR	CAQ	CAP	181.0	180.0
H8	CAR	CAQ	H9	1.0	0.3
CAR	CAQ	H9	CAP	180.0	179.7
H9	CAQ	CAR	H8	1.0	0.3
H9	CAQ	CAP	CAM	359.9	359.8
H10	CAL	CAM	NAN	179.4	180.2
CAM	CAL	H10	NAK	180.0	180.0
H10	CAL	NAK	NAO	181.1	179.9
H10	CAL	NAK	CAJ	359.5	360.0
NAK	CAJ	H11	CAI	240.7	240.0
NAK	CAJ	H11	H12	120.3	120.0
H11	CAJ	CAI	C2	143.5	60.0
CAI	CAJ	H11	H12	239.6	240.0
H11	CAJ	CAI	H13	263.5	180.0
H11	CAJ	CAI	H14	23.6	300.0
NAK	CAJ	H12	CAI	119.3	120.0
NAK	CAJ	H12	H11	239.7	240.0
H12	CAJ	CAI	C2	23.3	300.0
CAI	CAJ	H12	H11	120.4	120.0
H12	CAJ	CAI	H13	143.2	60.0
H12	CAJ	CAI	H14	263.3	180.0
CAJ	CAI	H13	C2	240.2	240.0
H13	CAI	CAJ	H11	263.5	180.0
H13	CAI	CAJ	H12	143.2	60.0
CAJ	CAI	H13	H14	120.1	120.1
C2	CAI	H13	H14	239.9	240.0
CAJ	CAI	H14	C2	119.8	120.0
H14	CAI	CAJ	H11	23.6	300.0
H14	CAI	CAJ	H12	263.3	180.0
CAJ	CAI	H14	H13	239.9	240.0
C2	CAI	H14	H13	120.1	119.9
C4	CAA	H15	H16	120.0	120.0
C4	CAA	H15	H17	240.0	240.0
H16	CAA	H15	H17	120.0	120.1
C4	CAA	H16	H15	240.0	240.0
C4	CAA	H16	H17	120.0	119.9
H15	CAA	H16	H17	240.0	239.9
C4	CAA	H17	H15	120.0	120.0
C4	CAA	H17	H16	240.0	240.1
H15	CAA	H17	H16	120.0	120.1
H18	N3	C4	CAA	359.0	360.0