PDB Chemical Component JPG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JPG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C01 |
C02 |
1.531 |
1.507 |
| O03 |
C02 |
1.168 |
1.212 |
| C02 |
C04 |
1.519 |
1.468 |
| C05 |
C04 |
1.340 |
1.399 |
| C05 |
C06 |
1.310 |
1.378 |
| C04 |
C09 |
1.384 |
1.405 |
| C13 |
C12 |
1.318 |
1.381 |
| C13 |
C14 |
1.314 |
1.383 |
| C12 |
C11 |
1.324 |
1.388 |
| C06 |
C07 |
1.344 |
1.386 |
| C09 |
O10 |
1.281 |
1.356 |
| C09 |
C08 |
1.343 |
1.387 |
| C14 |
C15 |
1.312 |
1.383 |
| C07 |
C08 |
1.280 |
1.381 |
| C11 |
O10 |
1.253 |
1.359 |
| C11 |
C16 |
1.377 |
1.387 |
| C15 |
C16 |
1.248 |
1.381 |
| C13 |
H131 |
1.080 |
1.080 |
| C15 |
H151 |
1.080 |
1.079 |
| C01 |
H011 |
1.100 |
1.090 |
| C01 |
H012 |
1.100 |
1.090 |
| C01 |
H013 |
1.100 |
1.090 |
| C05 |
H051 |
1.080 |
1.079 |
| C06 |
H061 |
1.080 |
1.080 |
| C07 |
H071 |
1.080 |
1.080 |
| C08 |
H081 |
1.080 |
1.080 |
| C12 |
H121 |
1.080 |
1.080 |
| C14 |
H141 |
1.080 |
1.080 |
| C16 |
H161 |
1.080 |
1.080 |
Bond Angles for JPG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C01 |
C02 |
C04 |
117.3 |
120.0 |
| C02 |
C01 |
H011 |
109.5 |
109.5 |
| C02 |
C01 |
H012 |
109.5 |
109.5 |
| C02 |
C01 |
H013 |
109.5 |
109.4 |
| O03 |
C02 |
C04 |
121.0 |
120.1 |
| C02 |
C04 |
C09 |
126.5 |
120.2 |
| C05 |
C04 |
C09 |
116.6 |
119.6 |
| C05 |
C06 |
C07 |
120.4 |
120.3 |
| C06 |
C05 |
H051 |
119.0 |
120.1 |
| C05 |
C06 |
H061 |
119.8 |
119.9 |
| C04 |
C09 |
O10 |
121.9 |
120.2 |
| C04 |
C09 |
C08 |
119.4 |
119.6 |
| C12 |
C13 |
C14 |
120.5 |
120.1 |
| C13 |
C12 |
C11 |
119.3 |
119.9 |
| C12 |
C13 |
H131 |
119.7 |
120.0 |
| C13 |
C12 |
H121 |
120.3 |
120.0 |
| C13 |
C14 |
C15 |
119.6 |
120.1 |
| C14 |
C13 |
H131 |
119.8 |
120.0 |
| C13 |
C14 |
H141 |
120.2 |
119.9 |
| C12 |
C11 |
C16 |
118.4 |
119.8 |
| C06 |
C07 |
C08 |
119.9 |
120.5 |
| C07 |
C06 |
H061 |
119.8 |
119.8 |
| C06 |
C07 |
H071 |
120.1 |
119.8 |
| C09 |
C08 |
H081 |
119.1 |
120.0 |
| C14 |
C15 |
C16 |
122.0 |
120.0 |
| C14 |
C15 |
H151 |
119.0 |
119.9 |
| C08 |
C07 |
H071 |
120.1 |
119.7 |
| C07 |
C08 |
H081 |
119.2 |
119.9 |
| C15 |
C16 |
C11 |
120.0 |
120.0 |
| C11 |
C16 |
H161 |
120.0 |
120.0 |
| C16 |
C15 |
H151 |
119.0 |
120.0 |
| C15 |
C16 |
H161 |
120.0 |
120.0 |
| H011 |
C01 |
H012 |
109.5 |
109.5 |
| H011 |
C01 |
H013 |
109.5 |
109.5 |
| H012 |
C01 |
H013 |
109.5 |
109.5 |
Torsion Angles for JPG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O03 |
C02 |
C01 |
C04 |
178.9 |
180.0 |
| C01 |
C02 |
C04 |
C09 |
332.8 |
180.0 |
| H011 |
C01 |
C02 |
H012 |
240.0 |
239.9 |
| H011 |
C01 |
C02 |
H013 |
120.0 |
120.0 |
| H012 |
C01 |
C02 |
H013 |
240.0 |
240.0 |
| C01 |
C02 |
O03 |
C04 |
181.1 |
180.0 |
| O03 |
C02 |
C01 |
H011 |
0.0 |
180.0 |
| O03 |
C02 |
C01 |
H012 |
120.0 |
300.1 |
| O03 |
C02 |
C01 |
H013 |
240.0 |
60.0 |
| O03 |
C02 |
C04 |
C09 |
153.9 |
360.0 |
| C04 |
C02 |
C01 |
H011 |
181.1 |
360.0 |
| C04 |
C02 |
C01 |
H012 |
301.1 |
120.0 |
| C04 |
C02 |
C01 |
H013 |
61.1 |
240.0 |
| C05 |
C04 |
C02 |
C09 |
179.8 |
180.3 |
| C02 |
C04 |
C09 |
O10 |
356.6 |
360.0 |
| C02 |
C04 |
C09 |
C08 |
182.4 |
179.7 |
| C02 |
C04 |
C05 |
C09 |
180.2 |
179.7 |
| C05 |
C04 |
C09 |
O10 |
176.9 |
179.7 |
| C05 |
C04 |
C09 |
C08 |
2.7 |
359.4 |
| C06 |
C05 |
C04 |
C09 |
0.1 |
0.3 |
| C05 |
C06 |
C07 |
C08 |
0.0 |
360.0 |
| C07 |
C06 |
C05 |
H061 |
180.0 |
180.0 |
| C05 |
C06 |
C07 |
H071 |
180.0 |
180.0 |
| C04 |
C09 |
C08 |
H081 |
175.8 |
180.3 |
| C12 |
C13 |
C14 |
C15 |
1.6 |
360.0 |
| C14 |
C13 |
C12 |
H131 |
180.0 |
180.3 |
| C12 |
C13 |
C14 |
H141 |
181.7 |
179.9 |
| C13 |
C12 |
C11 |
C16 |
1.9 |
359.9 |
| C14 |
C13 |
C12 |
C11 |
356.4 |
0.1 |
| C12 |
C13 |
C14 |
H131 |
180.0 |
179.7 |
| C14 |
C13 |
C12 |
H121 |
176.4 |
179.9 |
| C13 |
C14 |
C15 |
C16 |
2.3 |
0.0 |
| C13 |
C14 |
C15 |
H151 |
182.2 |
180.0 |
| C11 |
C12 |
C13 |
C14 |
356.4 |
0.1 |
| C11 |
C12 |
C13 |
H131 |
176.4 |
179.8 |
| C13 |
C12 |
C11 |
H121 |
180.0 |
179.8 |
| C15 |
C16 |
C11 |
C12 |
1.9 |
0.0 |
| C12 |
C11 |
C16 |
H161 |
181.9 |
180.1 |
| C07 |
C06 |
C05 |
H051 |
178.6 |
180.0 |
| C05 |
C06 |
C07 |
H061 |
180.0 |
180.0 |
| C08 |
C07 |
C06 |
H071 |
180.0 |
180.0 |
| C06 |
C07 |
C08 |
H081 |
182.8 |
180.0 |
| C04 |
C09 |
O10 |
C08 |
185.8 |
179.7 |
| O10 |
C09 |
C08 |
H081 |
1.4 |
0.0 |
| C04 |
C09 |
C08 |
O10 |
174.4 |
180.3 |
| C09 |
C08 |
C07 |
H071 |
182.8 |
179.7 |
| C07 |
C08 |
C09 |
H081 |
180.0 |
180.2 |
| C15 |
C14 |
C13 |
H131 |
181.7 |
180.3 |
| C13 |
C14 |
C15 |
H141 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
C11 |
356.0 |
360.0 |
| C16 |
C15 |
C14 |
H151 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
H161 |
176.0 |
179.9 |
| C04 |
C09 |
C08 |
C07 |
355.8 |
0.6 |
| C08 |
C07 |
C06 |
H061 |
180.0 |
180.0 |
| C06 |
C07 |
C08 |
H071 |
180.0 |
180.0 |
| C09 |
C08 |
C07 |
H081 |
180.0 |
179.8 |
| C13 |
C12 |
C11 |
O10 |
184.4 |
180.0 |
| C15 |
C16 |
C11 |
O10 |
179.4 |
180.0 |
| C11 |
C16 |
C15 |
H151 |
176.0 |
180.0 |
| C15 |
C16 |
C11 |
H161 |
180.0 |
179.9 |
| C12 |
C11 |
C16 |
C15 |
1.9 |
0.0 |
| C14 |
C15 |
C16 |
H151 |
180.0 |
180.0 |
| C11 |
C16 |
C15 |
H161 |
180.0 |
180.1 |
| C12 |
C13 |
H131 |
C14 |
180.0 |
180.3 |
| H131 |
C13 |
C12 |
C11 |
176.4 |
179.8 |
| H131 |
C13 |
C12 |
H121 |
356.4 |
359.6 |
| H131 |
C13 |
C14 |
C15 |
181.7 |
180.3 |
| H131 |
C13 |
C14 |
H141 |
1.7 |
0.2 |
| C14 |
C15 |
H151 |
C16 |
180.0 |
180.0 |
| H151 |
C15 |
C16 |
C11 |
176.0 |
180.0 |
| H151 |
C15 |
C16 |
H161 |
356.0 |
360.0 |
| H011 |
C01 |
C02 |
C04 |
181.1 |
360.0 |
| C02 |
C01 |
H011 |
H012 |
120.0 |
120.0 |
| C02 |
C01 |
H011 |
H013 |
240.0 |
240.1 |
| H012 |
C01 |
H011 |
H013 |
120.0 |
120.0 |
| H012 |
C01 |
C02 |
C04 |
301.1 |
120.0 |
| C02 |
C01 |
H012 |
H011 |
240.0 |
240.0 |
| C02 |
C01 |
H012 |
H013 |
120.0 |
120.0 |
| H011 |
C01 |
H012 |
H013 |
240.0 |
240.0 |
| H013 |
C01 |
C02 |
C04 |
61.1 |
240.0 |
| C02 |
C01 |
H013 |
H011 |
120.0 |
120.0 |
| C02 |
C01 |
H013 |
H012 |
240.0 |
240.0 |
| H011 |
C01 |
H013 |
H012 |
120.0 |
120.0 |
| H051 |
C05 |
C04 |
C09 |
180.0 |
180.3 |
| H051 |
C05 |
C06 |
C07 |
178.6 |
180.0 |
| H051 |
C05 |
C06 |
H061 |
358.6 |
360.0 |
| C05 |
C06 |
H061 |
C07 |
180.0 |
180.0 |
| H061 |
C06 |
C05 |
H051 |
358.6 |
360.0 |
| H061 |
C06 |
C07 |
C08 |
180.0 |
180.0 |
| H061 |
C06 |
C07 |
H071 |
0.0 |
0.0 |
| C06 |
C07 |
H071 |
C08 |
180.0 |
180.0 |
| H071 |
C07 |
C06 |
H061 |
0.0 |
0.0 |
| H071 |
C07 |
C08 |
H081 |
2.8 |
360.0 |
| H081 |
C08 |
C07 |
H071 |
2.8 |
360.0 |
| H121 |
C12 |
C13 |
C14 |
176.4 |
179.9 |
| C13 |
C12 |
H121 |
C11 |
180.0 |
180.2 |
| H121 |
C12 |
C13 |
H131 |
356.4 |
359.6 |
| H121 |
C12 |
C11 |
C16 |
181.9 |
180.1 |
| C13 |
C14 |
H141 |
C15 |
180.0 |
180.0 |
| H141 |
C14 |
C13 |
H131 |
1.7 |
0.2 |
| H141 |
C14 |
C15 |
C16 |
182.3 |
180.0 |
| H141 |
C14 |
C15 |
H151 |
2.2 |
360.0 |
| C15 |
C16 |
H161 |
C11 |
180.0 |
180.1 |
| H161 |
C16 |
C15 |
H151 |
356.0 |
360.0 |