PDB Chemical Component JOZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JOZ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C4 |
C8 |
1.377 |
1.392 |
| C4 |
C2 |
1.378 |
1.381 |
| C5 |
C6 |
1.509 |
1.527 |
| C5 |
C7 |
1.488 |
1.505 |
| C6 |
N10 |
1.445 |
1.460 |
| C7 |
C8 |
1.378 |
1.398 |
| C7 |
C3 |
1.382 |
1.377 |
| C8 |
C9 |
1.476 |
1.478 |
| C1 |
C2 |
1.378 |
1.384 |
| C1 |
C3 |
1.383 |
1.385 |
| C9 |
N10 |
1.376 |
1.348 |
| C9 |
O11 |
1.225 |
1.215 |
| C4 |
H4 |
1.080 |
1.081 |
| C5 |
H5 |
1.100 |
1.090 |
| C5 |
H5A |
1.100 |
1.090 |
| C6 |
H6 |
1.100 |
1.090 |
| C6 |
H6A |
1.100 |
1.090 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
H3 |
1.080 |
1.080 |
| N10 |
HN10 |
1.000 |
0.970 |
Bond Angles for JOZ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C4 |
C2 |
119.9 |
119.6 |
| C4 |
C8 |
C7 |
121.1 |
120.0 |
| C4 |
C8 |
C9 |
118.2 |
121.2 |
| C8 |
C4 |
H4 |
120.1 |
120.2 |
| C4 |
C2 |
C1 |
119.6 |
120.1 |
| C2 |
C4 |
H4 |
120.1 |
120.2 |
| C4 |
C2 |
H2 |
120.2 |
119.9 |
| C6 |
C5 |
C7 |
109.4 |
110.0 |
| C5 |
C6 |
N10 |
111.8 |
111.0 |
| C6 |
C5 |
H5 |
109.5 |
109.4 |
| C6 |
C5 |
H5A |
109.5 |
109.4 |
| C5 |
C6 |
H6 |
108.7 |
109.2 |
| C5 |
C6 |
H6A |
108.7 |
109.1 |
| C5 |
C7 |
C8 |
120.6 |
119.2 |
| C5 |
C7 |
C3 |
120.4 |
121.0 |
| C7 |
C5 |
H5 |
109.5 |
109.4 |
| C7 |
C5 |
H5A |
109.5 |
109.4 |
| C6 |
N10 |
C9 |
122.8 |
121.2 |
| N10 |
C6 |
H6 |
108.7 |
109.2 |
| N10 |
C6 |
H6A |
108.7 |
109.2 |
| C6 |
N10 |
HN10 |
118.6 |
119.4 |
| C8 |
C7 |
C3 |
119.0 |
119.9 |
| C7 |
C8 |
C9 |
120.7 |
118.8 |
| C7 |
C3 |
C1 |
120.2 |
119.9 |
| C7 |
C3 |
H3 |
119.9 |
120.1 |
| C8 |
C9 |
N10 |
115.3 |
119.1 |
| C8 |
C9 |
O11 |
119.2 |
120.5 |
| C2 |
C1 |
C3 |
120.3 |
120.4 |
| C2 |
C1 |
H1 |
119.8 |
119.8 |
| C1 |
C2 |
H2 |
120.2 |
119.9 |
| C3 |
C1 |
H1 |
119.8 |
119.8 |
| C1 |
C3 |
H3 |
119.9 |
120.0 |
| N10 |
C9 |
O11 |
125.5 |
120.5 |
| C9 |
N10 |
HN10 |
118.6 |
119.4 |
| H5 |
C5 |
H5A |
109.4 |
109.3 |
| H6 |
C6 |
H6A |
110.2 |
109.2 |
Torsion Angles for JOZ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
C4 |
C2 |
C1 |
359.8 |
359.9 |
| C2 |
C4 |
C8 |
H4 |
180.0 |
180.3 |
| C8 |
C4 |
C2 |
H2 |
179.8 |
179.9 |
| C5 |
C7 |
C8 |
C4 |
179.7 |
180.0 |
| C4 |
C8 |
C7 |
C3 |
0.0 |
0.0 |
| C7 |
C8 |
C4 |
C9 |
180.3 |
180.1 |
| C4 |
C8 |
C9 |
N10 |
165.5 |
197.7 |
| C4 |
C8 |
C9 |
O11 |
345.0 |
17.7 |
| C2 |
C4 |
C8 |
C7 |
0.2 |
0.1 |
| C2 |
C4 |
C8 |
C9 |
179.8 |
179.9 |
| C8 |
C4 |
C2 |
H4 |
180.0 |
179.7 |
| C4 |
C2 |
C1 |
C3 |
0.0 |
360.0 |
| C4 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
| C1 |
C2 |
C4 |
H2 |
180.0 |
180.0 |
| C6 |
C5 |
C7 |
C8 |
32.1 |
326.0 |
| C6 |
C5 |
C7 |
C3 |
211.8 |
146.0 |
| C7 |
C5 |
C6 |
H5 |
240.0 |
239.8 |
| C7 |
C5 |
C6 |
H5A |
120.0 |
120.1 |
| C5 |
C6 |
N10 |
C9 |
39.4 |
322.2 |
| N10 |
C6 |
C5 |
H6 |
240.0 |
239.6 |
| N10 |
C6 |
C5 |
H6A |
120.0 |
120.4 |
| C5 |
C6 |
N10 |
HN10 |
219.4 |
142.3 |
| H5 |
C5 |
C6 |
H5A |
240.0 |
240.3 |
| H6 |
C6 |
C5 |
H6A |
240.0 |
240.8 |
| C4 |
C8 |
C7 |
C5 |
179.7 |
180.0 |
| C7 |
C5 |
C6 |
N10 |
310.6 |
51.1 |
| C6 |
C5 |
C7 |
H5 |
120.0 |
120.2 |
| C6 |
C5 |
C7 |
H5A |
240.0 |
239.9 |
| C7 |
C5 |
C6 |
H6 |
70.5 |
171.6 |
| C7 |
C5 |
C6 |
H6A |
190.5 |
290.8 |
| C8 |
C7 |
C5 |
C3 |
180.3 |
180.0 |
| C5 |
C7 |
C8 |
C9 |
0.1 |
0.1 |
| C5 |
C7 |
C3 |
C1 |
180.1 |
179.9 |
| C5 |
C7 |
C3 |
H3 |
0.1 |
0.0 |
| H5 |
C5 |
C7 |
H5A |
120.0 |
119.7 |
| N10 |
C6 |
C5 |
C7 |
310.6 |
51.1 |
| N10 |
C6 |
C5 |
H5 |
70.6 |
171.3 |
| N10 |
C6 |
C5 |
H5A |
190.6 |
291.0 |
| C5 |
C6 |
N10 |
H6 |
120.0 |
120.4 |
| C5 |
C6 |
N10 |
H6A |
240.0 |
239.7 |
| C8 |
C9 |
N10 |
C6 |
353.7 |
2.9 |
| C6 |
N10 |
C9 |
O11 |
174.3 |
182.8 |
| C9 |
N10 |
C6 |
HN10 |
180.0 |
179.9 |
| H6 |
C6 |
N10 |
H6A |
120.0 |
119.3 |
| C7 |
C8 |
C4 |
C2 |
0.2 |
0.1 |
| C4 |
C8 |
C7 |
C9 |
179.6 |
179.9 |
| C7 |
C8 |
C4 |
H4 |
180.2 |
179.7 |
| C5 |
C7 |
C8 |
C3 |
179.7 |
180.0 |
| C8 |
C7 |
C5 |
H5 |
272.1 |
205.9 |
| C8 |
C7 |
C5 |
H5A |
152.1 |
86.2 |
| C8 |
C7 |
C3 |
C1 |
359.8 |
359.9 |
| C8 |
C7 |
C3 |
H3 |
179.8 |
180.0 |
| C7 |
C8 |
C9 |
N10 |
345.2 |
17.6 |
| C7 |
C8 |
C9 |
O11 |
164.7 |
197.6 |
| C5 |
C7 |
C3 |
C8 |
180.3 |
180.0 |
| C3 |
C7 |
C5 |
H5 |
91.8 |
25.8 |
| C3 |
C7 |
C5 |
H5A |
331.8 |
266.1 |
| C3 |
C7 |
C8 |
C9 |
180.4 |
180.1 |
| C2 |
C1 |
C3 |
C7 |
0.2 |
0.1 |
| C7 |
C3 |
C1 |
H1 |
180.2 |
180.1 |
| C1 |
C3 |
C7 |
H3 |
180.0 |
179.9 |
| C9 |
C8 |
C4 |
C2 |
179.8 |
179.9 |
| C4 |
C8 |
C9 |
C7 |
180.3 |
180.1 |
| C9 |
C8 |
C4 |
H4 |
359.8 |
359.6 |
| C6 |
N10 |
C9 |
C8 |
353.7 |
2.9 |
| C9 |
C8 |
C7 |
C3 |
180.4 |
180.1 |
| N10 |
C9 |
C8 |
O11 |
180.5 |
180.0 |
| C8 |
C9 |
N10 |
HN10 |
173.7 |
182.8 |
| C1 |
C2 |
C4 |
H4 |
179.8 |
180.3 |
| C4 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C7 |
C3 |
C1 |
C2 |
0.2 |
0.1 |
| C3 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
| C2 |
C1 |
C3 |
H3 |
180.2 |
180.0 |
| C7 |
C3 |
C1 |
H3 |
180.0 |
180.1 |
| C2 |
C1 |
C3 |
H1 |
180.0 |
180.0 |
| C3 |
C1 |
C2 |
H2 |
180.0 |
180.0 |
| C9 |
N10 |
C6 |
H6 |
279.4 |
201.8 |
| C9 |
N10 |
C6 |
H6A |
159.4 |
82.6 |
| C6 |
N10 |
C9 |
HN10 |
180.0 |
180.1 |
| C8 |
C9 |
N10 |
O11 |
179.5 |
180.0 |
| C8 |
C9 |
O11 |
N10 |
180.5 |
180.0 |
| O11 |
C9 |
N10 |
HN10 |
354.3 |
2.8 |
| C8 |
C4 |
H4 |
C2 |
180.0 |
180.4 |
| H4 |
C4 |
C8 |
C7 |
180.2 |
179.7 |
| H4 |
C4 |
C8 |
C9 |
359.8 |
359.6 |
| H4 |
C4 |
C2 |
C1 |
179.8 |
180.3 |
| H4 |
C4 |
C2 |
H2 |
359.8 |
0.3 |
| C6 |
C5 |
H5 |
C7 |
240.1 |
239.5 |
| H5 |
C5 |
C6 |
N10 |
70.6 |
171.3 |
| C6 |
C5 |
H5 |
H5A |
120.0 |
119.7 |
| H5 |
C5 |
C6 |
H6 |
190.6 |
291.7 |
| H5 |
C5 |
C6 |
H6A |
310.5 |
50.9 |
| H5 |
C5 |
C7 |
C8 |
272.1 |
205.9 |
| H5 |
C5 |
C7 |
C3 |
91.8 |
25.8 |
| C7 |
C5 |
H5 |
H5A |
240.0 |
240.3 |
| C6 |
C5 |
H5A |
C7 |
119.9 |
120.5 |
| H5A |
C5 |
C6 |
N10 |
190.6 |
291.0 |
| C6 |
C5 |
H5A |
H5 |
239.9 |
240.3 |
| H5A |
C5 |
C6 |
H6 |
310.6 |
51.4 |
| H5A |
C5 |
C6 |
H6A |
70.6 |
170.6 |
| H5A |
C5 |
C7 |
C8 |
152.1 |
86.2 |
| H5A |
C5 |
C7 |
C3 |
331.8 |
266.1 |
| C7 |
C5 |
H5A |
H5 |
120.0 |
119.8 |
| H6 |
C6 |
C5 |
C7 |
70.5 |
171.6 |
| C5 |
C6 |
H6 |
N10 |
238.1 |
238.5 |
| H6 |
C6 |
C5 |
H5 |
190.6 |
291.7 |
| H6 |
C6 |
C5 |
H5A |
310.6 |
51.4 |
| C5 |
C6 |
H6 |
H6A |
119.1 |
119.2 |
| H6 |
C6 |
N10 |
C9 |
279.4 |
201.8 |
| N10 |
C6 |
H6 |
H6A |
240.9 |
240.7 |
| H6 |
C6 |
N10 |
HN10 |
99.4 |
21.9 |
| H6A |
C6 |
C5 |
C7 |
190.5 |
290.8 |
| C5 |
C6 |
H6A |
N10 |
121.9 |
121.5 |
| H6A |
C6 |
C5 |
H5 |
310.5 |
50.9 |
| H6A |
C6 |
C5 |
H5A |
70.6 |
170.6 |
| C5 |
C6 |
H6A |
H6 |
241.0 |
240.8 |
| H6A |
C6 |
N10 |
C9 |
159.4 |
82.6 |
| N10 |
C6 |
H6A |
H6 |
119.1 |
119.3 |
| H6A |
C6 |
N10 |
HN10 |
339.4 |
262.6 |
| C2 |
C1 |
H1 |
C3 |
180.0 |
180.0 |
| H1 |
C1 |
C2 |
H2 |
360.0 |
360.0 |
| H1 |
C1 |
C3 |
H3 |
0.2 |
360.0 |
| C4 |
C2 |
H2 |
C1 |
180.0 |
180.0 |
| H2 |
C2 |
C4 |
H4 |
359.8 |
0.3 |
| H2 |
C2 |
C1 |
C3 |
180.0 |
180.0 |
| H2 |
C2 |
C1 |
H1 |
360.0 |
360.0 |
| C7 |
C3 |
H3 |
C1 |
180.0 |
179.9 |
| H3 |
C3 |
C1 |
H1 |
0.2 |
360.0 |
| C6 |
N10 |
HN10 |
C9 |
180.0 |
179.9 |
| HN10 |
N10 |
C6 |
H6 |
99.4 |
21.9 |
| HN10 |
N10 |
C6 |
H6A |
339.4 |
262.6 |
| HN10 |
N10 |
C9 |
O11 |
354.3 |
2.8 |