PDB Chemical Component JNK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JNK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.495 1.484
C1 C3 1.405 1.394
C1 C4 1.404 1.399
C2 C5 1.391 1.395
C2 C6 1.407 1.400
C3 C7 1.398 1.390
C3 H3 1.080 1.080
C4 C8 1.372 1.378
C4 H4 1.080 1.080
C5 C9 1.379 1.389
C5 H5 1.080 1.080
C6 C10 1.379 1.379
C6 H6 1.080 1.080
C7 N11 1.409 1.391
C7 N12 1.336 1.324
C8 N12 1.319 1.320
C8 H8 1.080 1.080
C9 N13 1.406 1.393
C9 N14 1.322 1.325
C10 N14 1.324 1.319
C10 H10 1.080 1.080
N11 C15 1.408 1.399
N11 H11 1.000 0.970
N13 C16 1.380 1.347
N13 H13 1.000 0.970
C15 C17 1.409 1.388
C15 C18 1.406 1.388
C16 C19 1.512 1.507
C16 O20 1.225 1.213
C17 C21 1.398 1.381
C17 H17 1.080 1.081
C18 C22 1.395 1.382
C18 H18 1.080 1.080
C19 C23 1.537 1.530
C19 C24 1.537 1.530
C19 H19 1.100 1.090
C21 C25 1.410 1.386
C21 H21 1.080 1.079
C22 C25 1.400 1.384
C22 H22 1.080 1.079
C23 C26 1.546 1.531
C23 H231 1.100 1.089
C23 H232 1.100 1.090
C24 C27 1.552 1.530
C24 H241 1.100 1.090
C24 H242 1.099 1.090
C25 F31 1.366 1.352
C26 C28 1.559 1.530
C26 H261 1.101 1.090
C26 H262 1.100 1.089
C27 C28 1.560 1.529
C27 H271 1.100 1.090
C27 H272 1.100 1.091
C28 O29 1.452 1.429
C28 H28 1.100 1.090
O29 C30 1.444 1.429
C30 H301 1.100 1.090
C30 H302 1.101 1.091
C30 H303 1.100 1.090

Bond Angles for JNK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C3 122.1 120.8
C2 C1 C4 120.0 120.9
C1 C2 C5 119.8 120.9
C1 C2 C6 122.1 120.9
C3 C1 C4 117.9 118.3
C1 C3 C7 119.3 118.9
C1 C3 H3 120.3 120.5
C1 C4 C8 119.9 119.2
C1 C4 H4 120.0 120.4
C5 C2 C6 118.0 118.3
C2 C5 C9 120.8 119.0
C2 C5 H5 119.6 120.5
C2 C6 C10 118.3 119.1
C2 C6 H6 120.9 120.4
C7 C3 H3 120.4 120.5
C3 C7 N11 122.2 119.6
C3 C7 N12 119.2 120.7
C8 C4 H4 120.0 120.4
C4 C8 N12 120.3 121.0
C4 C8 H8 119.9 119.5
C9 C5 H5 119.6 120.5
C5 C9 N13 119.7 119.7
C5 C9 N14 118.5 120.7
C10 C6 H6 120.8 120.5
C6 C10 N14 120.7 121.0
C6 C10 H10 119.7 119.5
N11 C7 N12 118.5 119.6
C7 N11 C15 125.6 120.0
C7 N11 H11 117.2 120.0
C7 N12 C8 123.4 121.9
N12 C8 H8 119.9 119.5
N13 C9 N14 121.2 119.6
C9 N13 C16 125.6 120.0
C9 N13 H13 117.2 120.0
C9 N14 C10 123.5 121.9
N14 C10 H10 119.7 119.5
C15 N11 H11 117.2 120.0
N11 C15 C17 119.6 120.0
N11 C15 C18 120.5 120.1
C16 N13 H13 117.2 120.0
N13 C16 C19 121.7 120.0
N13 C16 O20 122.2 120.0
C17 C15 C18 119.9 119.9
C15 C17 C21 118.6 120.0
C15 C17 H17 120.7 120.0
C15 C18 C22 120.7 120.0
C15 C18 H18 119.7 120.0
C19 C16 O20 116.1 120.0
C16 C19 C23 112.3 109.5
C16 C19 C24 117.1 109.5
C16 C19 H19 102.5 109.4
C21 C17 H17 120.7 120.0
C17 C21 C25 121.7 120.0
C17 C21 H21 119.2 120.0
C22 C18 H18 119.6 120.0
C18 C22 C25 120.1 120.0
C18 C22 H22 120.0 120.0
C23 C19 C24 111.8 109.5
C23 C19 H19 109.0 109.5
C19 C23 C26 109.3 109.5
C19 C23 H231 109.6 109.5
C19 C23 H232 109.5 109.5
C24 C19 H19 103.1 109.5
C19 C24 C27 109.6 109.4
C19 C24 H241 109.4 109.4
C19 C24 H242 109.4 109.5
C25 C21 H21 119.1 120.0
C21 C25 C22 118.9 120.1
C21 C25 F31 121.3 119.9
C25 C22 H22 120.0 120.0
C22 C25 F31 119.8 120.0
C26 C23 H231 109.6 109.4
C26 C23 H232 109.6 109.4
C23 C26 C28 114.8 109.4
C23 C26 H261 106.5 109.5
C23 C26 H262 107.7 109.4
H231 C23 H232 109.3 109.5
C27 C24 H241 109.4 109.5
C27 C24 H242 109.4 109.5
C24 C27 C28 115.1 109.5
C24 C27 H271 106.3 109.5
C24 C27 H272 107.6 109.4
H241 C24 H242 109.6 109.5
C28 C26 H261 106.5 109.5
C28 C26 H262 107.7 109.5
C26 C28 C27 113.0 109.5
C26 C28 O29 110.8 109.5
C26 C28 H28 107.1 109.5
H261 C26 H262 113.8 109.5
C28 C27 H271 106.3 109.5
C28 C27 H272 107.6 109.5
C27 C28 O29 112.3 109.5
C27 C28 H28 105.4 109.4
H271 C27 H272 114.0 109.4
O29 C28 H28 107.9 109.5
C28 O29 C30 114.3 106.8
O29 C30 H301 109.4 109.5
O29 C30 H302 109.5 109.4
O29 C30 H303 109.5 109.4
H301 C30 H302 109.5 109.5
H301 C30 H303 109.5 109.5
H302 C30 H303 109.5 109.5

Torsion Angles for JNK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C1 C2 C4 177.1 179.7
C2 C1 C3 C7 181.8 179.7
C2 C1 C3 H3 1.8 0.3
C2 C1 C4 C8 178.0 180.0
C2 C1 C4 H4 358.0 360.0
C5 C2 C1 C6 177.3 180.0
C1 C2 C5 C9 183.3 180.0
C1 C2 C5 H5 3.3 360.0
C1 C2 C6 C10 178.6 180.0
C1 C2 C6 H6 358.6 360.0
C2 C1 C3 C4 182.8 180.3
C3 C1 C2 C5 198.6 219.7
C3 C1 C2 C6 21.3 39.7
C3 C1 C4 C8 0.7 0.3
C3 C1 C4 H4 180.7 180.3
C7 C3 C1 H3 180.0 179.4
C1 C3 C7 N11 180.2 180.3
C1 C3 C7 N12 0.6 0.6
C2 C1 C4 C3 177.2 179.7
C4 C1 C2 C5 21.5 40.0
C4 C1 C2 C6 204.2 220.0
C4 C1 C3 C7 359.0 359.4
C4 C1 C3 H3 179.0 180.0
C8 C4 C1 H4 180.0 180.0
C1 C4 C8 N12 360.0 360.0
C1 C4 C8 H8 180.0 180.0
C5 C2 C1 C3 198.6 219.7
C5 C2 C1 C4 21.5 40.0
C1 C2 C5 C6 182.6 180.0
C5 C2 C6 C10 1.3 360.0
C5 C2 C6 H6 181.3 180.0
C9 C5 C2 H5 180.0 180.0
C2 C5 C9 N13 185.1 180.0
C2 C5 C9 N14 356.7 0.3
C6 C2 C1 C3 21.3 39.7
C6 C2 C1 C4 204.2 220.0
C1 C2 C6 C5 177.3 180.0
C6 C2 C5 C9 0.7 360.0
C6 C2 C5 H5 180.7 180.0
C10 C6 C2 H6 180.0 180.0
C2 C6 C10 N14 359.2 359.8
C2 C6 C10 H10 179.2 180.0
C7 C3 C1 C4 359.0 359.4
C1 C3 C7 H3 180.0 180.6
N11 C7 C3 N12 179.6 179.6
C3 C7 N11 C15 9.0 174.1
C3 C7 N11 H11 189.0 354.1
C3 C7 N12 C8 0.1 359.6
H3 C3 C1 C4 179.0 180.0
C1 C3 H3 C7 180.0 179.4
H3 C3 C7 N11 0.3 359.7
H3 C3 C7 N12 180.7 180.0
C1 C4 C8 H4 180.0 180.0
C7 N12 C8 C4 359.6 0.0
N12 C8 C4 H8 180.0 180.0
C1 C4 H4 C8 180.0 180.0
H4 C4 C8 N12 180.0 180.0
H4 C4 C8 H8 360.0 0.1
C9 C5 C2 C6 0.7 360.0
C2 C5 C9 H5 180.0 180.0
N13 C9 C5 N14 188.3 179.7
C5 C9 N13 C16 348.1 185.9
C5 C9 N13 H13 168.1 5.8
C5 C9 N14 C10 4.0 359.4
H5 C5 C2 C6 180.7 180.0
C2 C5 H5 C9 180.0 180.0
H5 C5 C9 N13 5.1 360.0
H5 C5 C9 N14 176.7 180.3
C2 C6 C10 H6 180.0 180.0
C9 N14 C10 C6 358.0 0.5
N14 C10 C6 H10 180.0 179.8
C2 C6 H6 C10 180.0 180.0
H6 C6 C10 N14 179.2 179.8
H6 C6 C10 H10 359.2 0.0
N11 C7 C3 H3 0.3 359.7
C3 C7 N11 N12 180.4 180.4
N11 C7 N12 C8 180.5 180.0
C15 N11 C7 H11 180.0 179.9
C7 N11 C15 C17 227.2 143.2
C7 N11 C15 C18 48.0 322.9
N12 C7 C3 H3 180.7 180.0
C3 C7 N12 N11 179.6 179.6
C4 C8 N12 C7 359.6 0.0
N12 C7 N11 C15 188.6 353.7
N12 C7 N11 H11 8.6 173.8
C7 N12 C8 H8 179.6 180.0
N12 C8 C4 H4 180.0 180.0
C4 C8 N12 H8 180.0 180.0
H8 C8 C4 H4 360.0 0.1
C4 C8 H8 N12 180.0 180.0
N13 C9 C5 H5 5.1 360.0
C5 C9 N13 N14 171.4 180.3
N13 C9 N14 C10 175.5 179.7
C16 N13 C9 H13 180.0 180.0
C9 N13 C16 C19 173.1 174.3
C9 N13 C16 O20 355.2 354.4
N14 C9 C5 H5 176.7 180.3
C5 C9 N14 N13 188.5 179.7
C6 C10 N14 C9 358.0 0.5
N14 C9 N13 C16 176.7 5.6
N14 C9 N13 H13 356.7 185.6
C9 N14 C10 H10 178.0 180.3
N14 C10 C6 H6 179.2 179.8
C6 C10 N14 H10 180.0 180.2
H10 C10 C6 H6 359.2 0.0
C6 C10 H10 N14 180.0 179.8
C15 N11 C7 N12 188.6 353.7
C7 N11 C15 H11 180.0 180.1
C17 C15 N11 C18 179.2 180.3
N11 C15 C17 C21 180.1 180.0
N11 C15 C17 H17 0.1 0.0
N11 C15 C18 C22 180.2 179.7
N11 C15 C18 H18 0.2 0.3
H11 N11 C7 N12 8.6 173.8
C7 N11 H11 C15 180.0 179.9
H11 N11 C15 C17 47.2 323.1
H11 N11 C15 C18 228.0 142.8
C16 N13 C9 N14 176.7 5.6
C9 N13 C16 H13 180.0 180.0
C19 C16 N13 O20 177.8 180.0
N13 C16 C19 C23 347.2 180.0
N13 C16 C19 C24 118.4 300.0
N13 C16 C19 H19 230.4 60.1
H13 N13 C9 N14 356.7 185.6
C9 N13 H13 C16 180.0 180.0
H13 N13 C16 C19 353.0 354.4
H13 N13 C16 O20 175.2 174.4
C17 C15 N11 H11 47.2 323.1
N11 C15 C17 C18 180.8 179.7
C17 C15 C18 C22 1.1 359.4
C17 C15 C18 H18 181.0 180.0
C21 C17 C15 H17 180.0 180.0
C15 C17 C21 C25 359.9 0.1
C15 C17 C21 H21 179.9 180.0
C18 C15 N11 H11 228.0 142.8
N11 C15 C18 C17 179.2 180.3
C18 C15 C17 C21 359.3 0.3
C18 C15 C17 H17 179.3 180.3
C22 C18 C15 H18 180.0 179.4
C15 C18 C22 C25 359.4 0.5
C15 C18 C22 H22 179.4 180.3
C19 C16 N13 H13 353.0 354.4
N13 C16 C19 O20 182.0 180.0
C23 C19 C16 C24 228.8 240.0
C23 C19 C16 H19 116.8 120.0
C16 C19 C23 C26 198.0 180.1
C16 C19 C23 H231 77.9 60.1
C16 C19 C23 H232 318.0 300.0
C24 C19 C16 H19 248.0 240.0
C16 C19 C24 C27 171.3 180.0
C16 C19 C24 H241 51.4 299.9
C16 C19 C24 H242 291.3 60.0
O20 C16 N13 H13 175.2 174.4
N13 C16 O20 C19 178.0 180.0
O20 C16 C19 C23 165.2 360.0
O20 C16 C19 C24 296.4 120.0
O20 C16 C19 H19 48.4 240.0
C21 C17 C15 C18 359.3 0.3
C15 C17 C21 H17 180.0 180.0
C25 C21 C17 H21 180.0 180.0
C17 C21 C25 C22 0.5 359.9
C17 C21 C25 F31 180.0 180.0
H17 C17 C15 C18 179.3 180.3
C15 C17 H17 C21 180.0 180.0
H17 C17 C21 C25 179.9 180.0
H17 C17 C21 H21 359.9 360.0
C15 C18 C22 H18 180.0 180.6
C21 C25 C22 C18 359.8 359.8
C25 C22 C18 H22 180.0 180.2
C18 C22 C25 F31 180.4 179.7
C15 C18 H18 C22 180.0 179.4
H18 C18 C22 C25 179.4 180.0
H18 C18 C22 H22 359.4 359.7
C23 C19 C16 O20 165.2 360.0
C16 C19 C23 C24 133.9 120.0
C16 C19 C23 H19 247.2 240.1
C24 C19 C23 H19 113.3 120.0
C23 C19 C24 C27 302.8 300.0
C23 C19 C24 H241 182.9 59.9
C23 C19 C24 H242 62.8 180.0
C26 C23 C19 H231 120.1 120.0
C26 C23 C19 H232 240.0 240.1
C19 C23 C26 C28 346.3 300.0
C19 C23 C26 H261 228.7 180.0
C19 C23 C26 H262 106.3 60.0
H231 C23 C19 H232 119.9 120.1
C24 C19 C16 O20 296.4 120.0
C16 C19 C24 C23 228.5 240.0
C16 C19 C24 H19 111.6 120.0
C23 C19 C24 H19 243.1 240.0
C24 C19 C23 C26 64.1 60.0
C24 C19 C23 H231 304.0 300.0
C24 C19 C23 H232 184.1 180.0
C27 C24 C19 H241 119.9 240.1
C27 C24 C19 H242 240.0 120.0
C19 C24 C27 C28 1.6 60.0
C19 C24 C27 H271 244.1 299.9
C19 C24 C27 H272 121.6 180.0
H241 C24 C19 H242 120.1 240.0
H19 C19 C16 O20 48.4 240.0
C16 C19 H19 C23 119.1 120.0
C16 C19 H19 C24 238.0 240.0
C23 C19 H19 C24 118.9 120.0
H19 C19 C23 C26 310.8 300.0
H19 C19 C23 H231 190.7 180.0
H19 C19 C23 H232 70.8 59.9
H19 C19 C24 C27 59.7 60.0
H19 C19 C24 H241 299.8 179.9
H19 C19 C24 H242 179.7 300.0
C25 C21 C17 H17 179.9 180.0
C17 C21 C25 H21 180.0 180.0
C18 C22 C25 C21 359.8 359.8
C21 C25 C22 H22 179.9 180.0
C22 C25 C21 F31 180.5 179.9
H21 C21 C17 H17 359.9 360.0
C17 C21 H21 C25 180.0 180.0
H21 C21 C25 C22 180.5 179.9
H21 C21 C25 F31 0.0 360.0
C25 C22 C18 H18 179.4 180.0
C18 C22 C25 H22 180.0 179.8
C22 C25 C21 H21 180.5 179.9
C21 C25 C22 F31 179.5 180.1
H22 C22 C18 H18 359.4 359.7
C18 C22 H22 C25 180.0 180.2
H22 C22 C25 F31 0.4 360.0
C26 C23 C19 C24 64.1 60.0
C26 C23 C19 H19 310.8 300.0
C19 C23 C26 H231 239.9 240.0
C19 C23 C26 H232 120.0 120.0
H231 C23 C26 H232 240.1 240.0
C28 C26 C23 H261 117.6 120.0
C28 C26 C23 H262 240.0 240.0
C23 C26 C28 C27 321.6 60.0
C23 C26 C28 O29 88.5 180.0
C23 C26 C28 H28 206.0 300.0
H261 C26 C23 H262 122.4 120.0
H231 C23 C19 C24 304.0 300.0
H231 C23 C19 H19 190.7 180.0
C19 C23 H231 C26 119.9 120.0
C19 C23 H231 H232 240.0 239.9
C26 C23 H231 H232 120.1 119.9
H231 C23 C26 C28 106.4 60.0
H231 C23 C26 H261 348.8 300.0
H231 C23 C26 H262 226.4 180.0
H232 C23 C19 C24 184.1 180.0
H232 C23 C19 H19 70.8 59.9
C19 C23 H232 C26 240.2 240.0
C19 C23 H232 H231 120.1 120.1
C26 C23 H232 H231 239.9 240.0
H232 C23 C26 C28 226.3 180.0
H232 C23 C26 H261 108.7 60.0
H232 C23 C26 H262 346.3 300.0
C27 C24 C19 H19 59.7 60.0
C19 C24 C27 H241 240.1 119.9
C19 C24 C27 H242 120.0 240.0
H241 C24 C27 H242 239.9 120.1
C26 C28 C27 C24 45.3 300.0
C28 C27 C24 H271 117.5 120.1
C28 C27 C24 H272 240.0 240.0
C24 C27 C28 O29 279.2 180.0
C24 C27 C28 H28 161.9 60.0
H271 C27 C24 H272 122.5 119.9
H241 C24 C19 H19 299.8 179.9
C19 C24 H241 C27 120.0 240.1
C19 C24 H241 H242 240.0 120.0
C27 C24 H241 H242 120.0 239.9
H241 C24 C27 C28 121.5 300.1
H241 C24 C27 H271 4.0 180.0
H241 C24 C27 H272 241.5 60.1
H242 C24 C19 H19 179.7 300.0
C19 C24 H242 C27 239.9 120.0
C19 C24 H242 H241 120.0 240.0
C27 C24 H242 H241 240.0 120.0
H242 C24 C27 C28 241.6 180.0
H242 C24 C27 H271 124.1 59.9
H242 C24 C27 H272 1.6 300.0
F31 C25 C21 H21 0.0 360.0
C21 C25 F31 C22 180.5 179.9
F31 C25 C22 H22 0.4 360.0
C28 C26 C23 H231 106.4 60.0
C28 C26 C23 H232 226.3 180.0
C23 C26 C28 H261 242.4 240.0
C23 C26 C28 H262 120.0 120.0
C24 C27 C28 C26 45.3 300.0
H261 C26 C28 H262 237.6 240.0
C26 C28 C27 H271 162.8 60.0
C26 C28 C27 H272 285.4 180.0
C27 C28 C26 O29 233.0 240.0
C27 C28 C26 H28 115.6 120.0
O29 C28 C26 H28 242.6 240.0
C26 C28 O29 C30 134.6 150.0
H261 C26 C23 H231 348.8 300.0
H261 C26 C23 H232 108.7 60.0
C23 C26 H261 C28 123.0 120.0
C23 C26 H261 H262 241.5 240.0
C28 C26 H261 H262 118.5 120.0
H261 C26 C28 C27 79.1 180.0
H261 C26 C28 O29 206.1 300.0
H261 C26 C28 H28 323.5 60.0
H262 C26 C23 H231 226.4 180.0
H262 C26 C23 H232 346.3 300.0
C23 C26 H262 C28 235.6 240.0
C23 C26 H262 H261 117.8 120.0
C28 C26 H262 H261 242.2 240.0
H262 C26 C28 C27 201.6 300.0
H262 C26 C28 O29 328.5 60.0
H262 C26 C28 H28 86.0 180.1
C28 C27 C24 H241 121.5 300.1
C28 C27 C24 H242 241.6 180.0
C24 C27 C28 H271 242.5 240.0
C24 C27 C28 H272 120.0 120.0
C27 C28 C26 H261 79.1 180.0
C27 C28 C26 H262 201.6 300.0
C26 C28 C27 O29 126.2 120.0
C26 C28 C27 H28 243.4 240.0
H271 C27 C28 H272 237.4 240.0
O29 C28 C27 H28 117.2 120.0
C27 C28 O29 C30 261.9 270.0
H271 C27 C24 H241 4.0 180.0
H271 C27 C24 H242 124.1 59.9
C24 C27 H271 C28 123.2 120.1
C24 C27 H271 H272 241.6 240.1
C28 C27 H271 H272 118.4 120.0
H271 C27 C28 O29 36.6 300.0
H271 C27 C28 H28 279.4 180.0
H272 C27 C24 H241 241.5 60.1
H272 C27 C24 H242 1.6 300.0
C24 C27 H272 C28 235.4 240.0
C24 C27 H272 H271 117.7 119.9
C28 C27 H272 H271 242.3 239.9
H272 C27 C28 O29 159.2 60.0
H272 C27 C28 H28 42.0 300.0
O29 C28 C26 H261 206.1 300.0
O29 C28 C26 H262 328.5 60.0
C26 C28 O29 C27 232.6 240.0
C26 C28 O29 H28 116.9 120.0
O29 C28 C27 H271 36.6 300.0
O29 C28 C27 H272 159.2 60.0
C27 C28 O29 H28 244.3 240.0
C28 O29 C30 H301 298.7 300.0
C28 O29 C30 H302 178.7 60.0
C28 O29 C30 H303 58.7 180.0
H28 C28 C26 H261 323.5 60.0
H28 C28 C26 H262 86.0 180.1
C26 C28 H28 C27 120.6 120.0
C26 C28 H28 O29 240.7 240.0
H28 C28 C27 H271 279.4 180.0
H28 C28 C27 H272 42.0 300.0
C27 C28 H28 O29 120.1 120.0
H28 C28 O29 C30 17.7 29.9
C30 O29 C28 H28 17.7 29.9
H301 C30 O29 H302 120.0 240.0
H301 C30 O29 H303 240.0 120.0
H302 C30 O29 H303 120.0 240.0
O29 C30 H301 H302 240.0 120.0
O29 C30 H301 H303 120.0 240.0
H302 C30 H301 H303 240.0 120.0
O29 C30 H302 H301 120.0 240.0
O29 C30 H302 H303 240.0 120.0
H301 C30 H302 H303 120.0 240.0
O29 C30 H303 H301 240.0 120.0
O29 C30 H303 H302 120.0 240.0
H301 C30 H303 H302 240.0 120.0