PDB Chemical Component JJG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JJG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C06 |
C05 |
1.392 |
1.380 |
| C06 |
C01 |
1.384 |
1.383 |
| C05 |
C04 |
1.394 |
1.390 |
| C01 |
C02 |
1.396 |
1.384 |
| C04 |
S07 |
1.779 |
1.762 |
| C04 |
C03 |
1.373 |
1.390 |
| C02 |
C03 |
1.384 |
1.380 |
| S07 |
C08 |
1.850 |
1.814 |
| C08 |
C09 |
1.540 |
1.529 |
| C09 |
N10 |
1.567 |
1.469 |
| N10 |
C15 |
1.520 |
1.471 |
| N10 |
C11 |
1.501 |
1.470 |
| C15 |
C14 |
1.533 |
1.531 |
| C11 |
C12 |
1.527 |
1.531 |
| C14 |
O13 |
1.396 |
1.430 |
| C12 |
O13 |
1.391 |
1.430 |
| C15 |
H151 |
1.100 |
1.090 |
| C15 |
H152 |
1.100 |
1.090 |
| C01 |
H011 |
1.080 |
1.080 |
| C02 |
H021 |
1.080 |
1.080 |
| C03 |
H031 |
1.079 |
1.080 |
| C05 |
H051 |
1.080 |
1.080 |
| C06 |
H061 |
1.080 |
1.080 |
| C08 |
H081 |
1.101 |
1.090 |
| C08 |
H082 |
1.100 |
1.091 |
| C09 |
H091 |
1.100 |
1.090 |
| C09 |
H092 |
1.100 |
1.090 |
| C11 |
H112 |
1.100 |
1.090 |
| C11 |
H111 |
1.100 |
1.090 |
| C12 |
H121 |
1.100 |
1.090 |
| C12 |
H122 |
1.100 |
1.090 |
| C14 |
H142 |
1.100 |
1.091 |
| C14 |
H141 |
1.100 |
1.089 |
Bond Angles for JJG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C06 |
C05 |
H051 |
119.8 |
120.1 |
| C06 |
C01 |
H011 |
120.5 |
120.0 |
| C05 |
C04 |
S07 |
119.2 |
120.1 |
| C01 |
C02 |
C03 |
121.2 |
120.1 |
| C02 |
C01 |
H011 |
120.5 |
119.9 |
| C01 |
C02 |
H021 |
119.4 |
119.9 |
| C04 |
S07 |
C08 |
117.1 |
103.0 |
| C04 |
C03 |
H031 |
120.2 |
120.0 |
| C03 |
C02 |
H021 |
119.4 |
120.0 |
| C02 |
C03 |
H031 |
120.2 |
120.1 |
| S07 |
C08 |
C09 |
111.7 |
109.5 |
| S07 |
C08 |
H081 |
108.9 |
109.5 |
| S07 |
C08 |
H082 |
108.9 |
109.5 |
| C08 |
C09 |
N10 |
113.6 |
109.4 |
| C09 |
C08 |
H081 |
108.9 |
109.5 |
| C09 |
C08 |
H082 |
108.9 |
109.5 |
| C08 |
C09 |
H091 |
108.4 |
109.5 |
| C08 |
C09 |
H092 |
108.5 |
109.5 |
| C09 |
N10 |
C11 |
112.1 |
111.0 |
| N10 |
C09 |
H091 |
108.4 |
109.4 |
| N10 |
C09 |
H092 |
108.4 |
109.5 |
| N10 |
C15 |
C14 |
113.6 |
109.2 |
| N10 |
C15 |
H151 |
108.4 |
109.5 |
| N10 |
C15 |
H152 |
108.4 |
109.5 |
| N10 |
C11 |
C12 |
112.8 |
109.3 |
| N10 |
C11 |
H112 |
108.7 |
109.5 |
| N10 |
C11 |
H111 |
108.7 |
109.5 |
| C15 |
C14 |
O13 |
110.4 |
109.3 |
| C14 |
C15 |
H151 |
108.4 |
109.5 |
| C14 |
C15 |
H152 |
108.4 |
109.5 |
| C15 |
C14 |
H142 |
109.2 |
109.5 |
| C15 |
C14 |
H141 |
109.3 |
109.5 |
| C11 |
C12 |
O13 |
116.4 |
109.3 |
| C12 |
C11 |
H112 |
108.6 |
109.5 |
| C12 |
C11 |
H111 |
108.6 |
109.5 |
| C11 |
C12 |
H121 |
107.7 |
109.5 |
| C11 |
C12 |
H122 |
107.7 |
109.5 |
| O13 |
C12 |
H121 |
107.7 |
109.5 |
| O13 |
C12 |
H122 |
107.7 |
109.4 |
| H151 |
C15 |
H152 |
109.5 |
109.6 |
| H081 |
C08 |
H082 |
109.5 |
109.4 |
| H091 |
C09 |
H092 |
109.5 |
109.5 |
| H112 |
C11 |
H111 |
109.4 |
109.5 |
| H121 |
C12 |
H122 |
109.5 |
109.6 |
| H142 |
C14 |
H141 |
109.4 |
109.5 |
Torsion Angles for JJG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C05 |
C06 |
C01 |
H011 |
181.3 |
179.7 |
| C06 |
C05 |
C04 |
S07 |
179.5 |
179.8 |
| C02 |
C01 |
C06 |
H011 |
180.0 |
179.8 |
| C06 |
C01 |
C02 |
H021 |
180.0 |
180.2 |
| C05 |
C04 |
S07 |
C08 |
134.2 |
360.0 |
| C05 |
C04 |
C03 |
H031 |
179.6 |
180.0 |
| C06 |
C01 |
C02 |
H011 |
180.0 |
180.2 |
| C03 |
C02 |
C01 |
H021 |
180.0 |
180.0 |
| C01 |
C02 |
C03 |
H031 |
179.5 |
180.0 |
| S07 |
C04 |
C03 |
H031 |
1.9 |
0.0 |
| C04 |
S07 |
C08 |
C09 |
278.9 |
180.0 |
| C04 |
S07 |
C08 |
H081 |
39.2 |
300.0 |
| C04 |
S07 |
C08 |
H082 |
158.6 |
60.0 |
| C04 |
C03 |
C02 |
H021 |
179.5 |
180.0 |
| C02 |
C03 |
C04 |
H031 |
180.0 |
180.0 |
| C03 |
C02 |
C01 |
H011 |
180.0 |
180.0 |
| C01 |
C02 |
C03 |
H021 |
180.0 |
180.0 |
| C04 |
C03 |
C02 |
H031 |
180.0 |
180.0 |
| S07 |
C08 |
C09 |
N10 |
109.9 |
180.0 |
| C09 |
C08 |
S07 |
H081 |
239.7 |
240.0 |
| C09 |
C08 |
S07 |
H082 |
120.3 |
120.0 |
| S07 |
C08 |
C09 |
H091 |
230.5 |
299.9 |
| S07 |
C08 |
C09 |
H092 |
349.3 |
60.0 |
| H081 |
C08 |
S07 |
H082 |
240.7 |
240.0 |
| S07 |
C08 |
C09 |
H081 |
120.3 |
120.0 |
| S07 |
C08 |
C09 |
H082 |
239.7 |
240.0 |
| C08 |
C09 |
N10 |
C11 |
69.6 |
66.3 |
| N10 |
C09 |
C08 |
H091 |
239.4 |
240.1 |
| N10 |
C09 |
C08 |
H092 |
120.6 |
120.0 |
| H081 |
C08 |
C09 |
H082 |
119.4 |
120.0 |
| H091 |
C09 |
C08 |
H092 |
241.2 |
239.9 |
| N10 |
C09 |
C08 |
H081 |
349.5 |
60.0 |
| N10 |
C09 |
C08 |
H082 |
230.2 |
300.0 |
| C08 |
C09 |
N10 |
H091 |
120.6 |
119.9 |
| C08 |
C09 |
N10 |
H092 |
239.4 |
240.0 |
| C09 |
N10 |
C15 |
C14 |
210.5 |
177.6 |
| C09 |
N10 |
C15 |
H151 |
331.1 |
297.5 |
| C09 |
N10 |
C15 |
H152 |
89.9 |
57.6 |
| C09 |
N10 |
C11 |
C12 |
97.1 |
182.4 |
| C09 |
N10 |
C11 |
H112 |
217.6 |
302.4 |
| C09 |
N10 |
C11 |
H111 |
336.5 |
62.5 |
| H091 |
C09 |
N10 |
H092 |
118.8 |
120.0 |
| N10 |
C15 |
C14 |
O13 |
64.4 |
56.8 |
| C14 |
C15 |
N10 |
H151 |
239.4 |
240.1 |
| C14 |
C15 |
N10 |
H152 |
120.6 |
120.0 |
| N10 |
C15 |
C14 |
H142 |
184.5 |
176.8 |
| N10 |
C15 |
C14 |
H141 |
304.2 |
296.8 |
| H151 |
C15 |
N10 |
H152 |
241.2 |
239.8 |
| C11 |
N10 |
C09 |
H091 |
309.0 |
306.4 |
| C11 |
N10 |
C09 |
H092 |
190.3 |
186.3 |
| C11 |
N10 |
C15 |
C14 |
336.7 |
301.4 |
| C11 |
N10 |
C15 |
H151 |
97.3 |
61.3 |
| C11 |
N10 |
C15 |
H152 |
216.0 |
181.5 |
| N10 |
C11 |
C12 |
O13 |
56.2 |
303.2 |
| C12 |
C11 |
N10 |
H112 |
239.5 |
240.0 |
| C12 |
C11 |
N10 |
H111 |
120.5 |
119.9 |
| N10 |
C11 |
C12 |
H121 |
177.2 |
63.1 |
| N10 |
C11 |
C12 |
H122 |
295.2 |
183.3 |
| H112 |
C11 |
N10 |
H111 |
241.0 |
239.9 |
| N10 |
C15 |
C14 |
H151 |
120.6 |
119.9 |
| N10 |
C15 |
C14 |
H152 |
239.4 |
240.0 |
| H151 |
C15 |
C14 |
H152 |
118.8 |
120.2 |
| H142 |
C14 |
C15 |
H141 |
240.3 |
239.9 |
| N10 |
C11 |
C12 |
H112 |
120.5 |
120.0 |
| N10 |
C11 |
C12 |
H111 |
239.5 |
240.1 |
| O13 |
C12 |
C11 |
H121 |
239.0 |
240.1 |
| O13 |
C12 |
C11 |
H122 |
121.0 |
119.9 |
| H112 |
C11 |
C12 |
H111 |
118.9 |
120.1 |
| H121 |
C12 |
C11 |
H122 |
242.0 |
239.8 |
| O13 |
C14 |
C15 |
H151 |
303.8 |
297.0 |
| O13 |
C14 |
C15 |
H152 |
185.0 |
176.8 |
| C15 |
C14 |
O13 |
H142 |
120.1 |
119.9 |
| C15 |
C14 |
O13 |
H141 |
239.8 |
240.0 |
| C14 |
O13 |
C12 |
H121 |
223.4 |
298.8 |
| C14 |
O13 |
C12 |
H122 |
105.4 |
178.6 |
| C15 |
C14 |
O13 |
C12 |
318.9 |
301.3 |
| O13 |
C12 |
C11 |
H112 |
295.7 |
183.2 |
| O13 |
C12 |
C11 |
H111 |
176.7 |
63.1 |
| C11 |
C12 |
O13 |
H121 |
121.0 |
119.9 |
| C11 |
C12 |
O13 |
H122 |
239.0 |
240.1 |
| H121 |
C12 |
O13 |
H122 |
118.0 |
120.1 |
| N10 |
C15 |
H151 |
C14 |
236.2 |
240.3 |
| N10 |
C15 |
H151 |
H152 |
118.1 |
120.2 |
| H151 |
C15 |
C14 |
O13 |
303.8 |
297.0 |
| C14 |
C15 |
H151 |
H152 |
241.9 |
239.9 |
| H151 |
C15 |
C14 |
H142 |
63.9 |
56.9 |
| H151 |
C15 |
C14 |
H141 |
183.6 |
177.0 |
| N10 |
C15 |
H152 |
C14 |
123.8 |
119.8 |
| N10 |
C15 |
H152 |
H151 |
241.9 |
239.9 |
| H152 |
C15 |
C14 |
O13 |
185.0 |
176.8 |
| C14 |
C15 |
H152 |
H151 |
118.1 |
120.1 |
| H152 |
C15 |
C14 |
H142 |
305.2 |
296.7 |
| H152 |
C15 |
C14 |
H141 |
64.9 |
56.8 |
| H011 |
C01 |
C02 |
C03 |
180.0 |
180.0 |
| H011 |
C01 |
C02 |
H021 |
0.0 |
0.0 |
| C01 |
C02 |
H021 |
C03 |
180.0 |
180.0 |
| H021 |
C02 |
C01 |
H011 |
0.0 |
0.0 |
| H021 |
C02 |
C03 |
H031 |
359.5 |
360.0 |
| H031 |
C03 |
C02 |
H021 |
359.5 |
360.0 |
| H051 |
C05 |
C04 |
S07 |
359.5 |
0.0 |
| H061 |
C06 |
C05 |
H051 |
357.8 |
359.8 |
| H061 |
C06 |
C01 |
H011 |
1.3 |
0.2 |
| S07 |
C08 |
H081 |
C09 |
237.9 |
240.0 |
| S07 |
C08 |
H081 |
H082 |
119.0 |
120.0 |
| H081 |
C08 |
C09 |
N10 |
349.5 |
60.0 |
| C09 |
C08 |
H081 |
H082 |
241.0 |
240.0 |
| H081 |
C08 |
C09 |
H091 |
110.1 |
180.0 |
| H081 |
C08 |
C09 |
H092 |
228.9 |
300.0 |
| S07 |
C08 |
H082 |
C09 |
122.0 |
120.0 |
| S07 |
C08 |
H082 |
H081 |
241.0 |
240.0 |
| H082 |
C08 |
C09 |
N10 |
230.2 |
300.0 |
| C09 |
C08 |
H082 |
H081 |
119.0 |
120.0 |
| H082 |
C08 |
C09 |
H091 |
350.8 |
60.0 |
| H082 |
C08 |
C09 |
H092 |
109.6 |
180.0 |
| C08 |
C09 |
H091 |
N10 |
236.2 |
240.1 |
| H091 |
C09 |
C08 |
H081 |
110.1 |
180.0 |
| H091 |
C09 |
C08 |
H082 |
350.8 |
60.0 |
| C08 |
C09 |
H091 |
H092 |
118.2 |
120.1 |
| H091 |
C09 |
N10 |
C11 |
309.0 |
306.4 |
| N10 |
C09 |
H091 |
H092 |
241.9 |
240.0 |
| C08 |
C09 |
H092 |
N10 |
123.8 |
120.0 |
| H092 |
C09 |
C08 |
H081 |
228.9 |
300.0 |
| H092 |
C09 |
C08 |
H082 |
109.6 |
180.0 |
| C08 |
C09 |
H092 |
H091 |
241.9 |
240.0 |
| H092 |
C09 |
N10 |
C11 |
190.3 |
186.3 |
| N10 |
C09 |
H092 |
H091 |
118.1 |
120.0 |
| N10 |
C11 |
H112 |
C12 |
236.9 |
240.2 |
| N10 |
C11 |
H112 |
H111 |
118.5 |
120.0 |
| H112 |
C11 |
C12 |
O13 |
295.7 |
183.2 |
| C12 |
C11 |
H112 |
H111 |
241.5 |
239.9 |
| H112 |
C11 |
C12 |
H121 |
56.7 |
303.1 |
| H112 |
C11 |
C12 |
H122 |
174.7 |
63.3 |
| N10 |
C11 |
H111 |
C12 |
123.1 |
119.8 |
| N10 |
C11 |
H111 |
H112 |
241.5 |
239.9 |
| H111 |
C11 |
C12 |
O13 |
176.7 |
63.1 |
| C12 |
C11 |
H111 |
H112 |
118.4 |
120.1 |
| H111 |
C11 |
C12 |
H121 |
297.8 |
183.0 |
| H111 |
C11 |
C12 |
H122 |
55.8 |
303.2 |
| C11 |
C12 |
H121 |
O13 |
233.7 |
240.2 |
| H121 |
C12 |
C11 |
H112 |
56.7 |
303.1 |
| H121 |
C12 |
C11 |
H111 |
297.8 |
183.0 |
| C11 |
C12 |
H121 |
H122 |
116.9 |
120.2 |
| O13 |
C12 |
H121 |
H122 |
243.1 |
239.9 |
| C11 |
C12 |
H122 |
O13 |
126.3 |
119.8 |
| H122 |
C12 |
C11 |
H112 |
174.7 |
63.3 |
| H122 |
C12 |
C11 |
H111 |
55.8 |
303.2 |
| C11 |
C12 |
H122 |
H121 |
243.1 |
239.8 |
| O13 |
C12 |
H122 |
H121 |
116.9 |
120.1 |
| C15 |
C14 |
H142 |
O13 |
239.1 |
240.2 |
| H142 |
C14 |
C15 |
H151 |
63.9 |
56.9 |
| H142 |
C14 |
C15 |
H152 |
305.2 |
296.7 |
| C15 |
C14 |
H142 |
H141 |
119.6 |
120.1 |
| C15 |
C14 |
H141 |
O13 |
120.9 |
119.8 |
| H141 |
C14 |
C15 |
H151 |
183.6 |
177.0 |
| H141 |
C14 |
C15 |
H152 |
64.9 |
56.8 |
| C15 |
C14 |
H141 |
H142 |
240.4 |
239.9 |