PDB Chemical Component JIN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JIN

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C10 C01 1.388 1.452
C10 C09 1.396 1.342
C10 H10 1.080 1.085
C12 C09 1.402 1.503
C12 N11 1.341 1.397
C12 O14 1.232 1.232
C13 N11 1.496 1.460
C13 H131 1.100 1.094
C13 H132 1.100 1.093
C13 H133 1.100 1.093
C15 C16 1.419 1.395
C15 C20 1.405 1.395
C15 H15 1.080 1.087
C16 C17 1.425 1.395
C16 H16 1.080 1.086
C19 C18 1.406 1.398
C19 C09 1.492 1.475
C19 C20 1.371 1.399
C20 CL5 1.789 1.731
C27 C28 1.410 1.397
C27 N08 1.367 1.408
C27 C26 1.406 1.396
C30 C29 1.375 1.395
C30 F35 1.328 1.340
C30 C31 1.372 1.395
C31 C26 1.407 1.395
C31 H31 1.080 1.086
C34 C29 1.506 1.491
C34 H341 1.100 1.097
C34 H342 1.100 1.098
C34 H343 1.100 1.098
C29 C28 1.418 1.394
C28 H28 1.080 1.088
C26 H26 1.080 1.086
N08 C04 1.341 1.411
N08 HN08 1.000 1.016
C04 N03 1.311 1.343
C04 N05 1.343 1.347
N03 C02 1.348 1.348
C02 C01 1.406 1.387
C02 H02 1.080 1.085
N05 C06 1.349 1.354
C06 C01 1.369 1.386
C06 N11 1.326 1.428
C18 CL4 1.746 1.731
C18 C17 1.408 1.395
C17 H17 1.080 1.087

Bond Angles for JIN

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C09 C10 C01 120.5 120.7
C01 C10 H10 119.7 117.8
C10 C01 C02 122.3 122.4
C10 C01 C06 118.0 121.1
C09 C10 H10 119.8 121.4
C10 C09 C12 117.1 120.2
C10 C09 C19 117.9 119.1
N11 C12 C09 121.5 116.9
O14 C12 C09 121.2 119.1
C12 C09 C19 124.9 120.6
N11 C12 O14 117.3 123.9
C12 N11 C13 122.2 120.2
C12 N11 C06 120.1 122.7
N11 C13 H131 109.5 110.1
N11 C13 H132 109.4 110.2
N11 C13 H133 109.4 110.2
C13 N11 C06 117.6 117.1
H131 C13 H132 109.5 108.7
H131 C13 H133 109.5 108.8
H132 C13 H133 109.5 108.8
C16 C15 C20 119.2 120.0
C16 C15 H15 120.4 119.0
C15 C16 C17 120.3 120.0
C15 C16 H16 119.8 120.0
C20 C15 H15 120.4 121.0
C15 C20 C19 121.2 120.3
C15 C20 CL5 118.6 117.7
C17 C16 H16 119.8 120.0
C16 C17 C18 117.8 120.0
C16 C17 H17 121.1 119.0
C09 C19 C18 118.1 120.3
C20 C19 C18 119.8 119.5
C19 C18 CL4 124.5 122.0
C19 C18 C17 121.6 120.3
C20 C19 C09 121.5 120.2
C19 C20 CL5 120.1 122.0
C28 C27 N08 115.0 120.1
C28 C27 C26 115.0 119.8
C27 C28 C29 120.0 120.1
C27 C28 H28 120.0 119.9
C26 C27 N08 129.7 120.1
C27 N08 C04 127.3 132.6
C27 N08 HN08 116.3 113.8
C27 C26 C31 123.5 120.1
C27 C26 H26 118.2 120.6
F35 C30 C29 123.7 120.5
C31 C30 C29 117.3 120.0
C30 C29 C34 115.3 120.1
C30 C29 C28 123.2 120.0
C31 C30 F35 119.0 119.5
C30 C31 C26 120.6 120.0
C30 C31 H31 119.7 120.0
C26 C31 H31 119.7 120.0
C31 C26 H26 118.2 119.4
C29 C34 H341 109.5 110.4
C29 C34 H342 109.5 111.3
C29 C34 H343 109.5 111.3
C34 C29 C28 121.3 119.9
H341 C34 H342 109.4 108.4
H341 C34 H343 109.5 108.5
H342 C34 H343 109.5 106.8
C29 C28 H28 120.0 119.9
C04 N08 HN08 116.3 113.5
N08 C04 N03 112.3 116.6
N08 C04 N05 121.9 116.5
N03 C04 N05 125.7 126.9
C04 N03 C02 119.1 114.8
C04 N05 C06 116.8 116.3
N03 C02 C01 118.1 123.8
N03 C02 H02 120.9 114.6
C01 C02 H02 120.9 121.6
C02 C01 C06 119.7 116.5
N05 C06 C01 120.5 121.8
N05 C06 N11 116.7 120.0
N11 C06 C01 122.7 118.3
C17 C18 CL4 113.9 117.7
C18 C17 H17 121.1 121.0

Torsion Angles for JIN

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C09 C10 C01 H10 180.0 180.2
C01 C10 C09 C12 1.8 0.1
C01 C10 C09 C19 178.8 179.2
N03 C02 C01 C10 180.6 179.8
C10 C01 C02 H02 0.7 359.8
C02 C01 C10 C06 177.5 180.3
N05 C06 C01 C10 178.6 180.2
N11 C06 C01 C10 356.5 0.4
C01 C10 C09 H10 180.0 179.8
C09 C10 C01 C02 178.5 179.8
C09 C10 C01 C06 1.0 359.5
N11 C12 C09 C10 357.5 0.4
O14 C12 C09 C10 179.2 180.8
C12 C09 C10 C19 183.1 180.9
C10 C09 C19 C18 89.4 270.0
C20 C19 C09 C10 260.5 90.0
C09 C10 H10 C01 180.0 179.8
H10 C10 C01 C02 358.5 359.6
H10 C10 C01 C06 181.0 179.3
H10 C10 C09 C12 181.8 180.4
H10 C10 C09 C19 358.7 359.4
C12 C09 C10 C01 1.8 0.1
C12 C09 C10 H10 181.8 180.4
C10 C09 C12 C19 176.7 179.1
N11 C12 C09 O14 178.3 179.6
C09 C12 N11 C13 183.3 179.7
C09 C12 N11 C06 0.2 359.5
C12 C09 C19 C18 266.1 89.0
C20 C19 C09 C12 77.1 269.1
C10 C09 C12 N11 357.5 0.4
O14 C12 N11 C09 178.4 179.6
N11 C12 C09 C19 180.8 181.3
C12 N11 C13 H131 304.3 239.1
C12 N11 C13 H132 64.3 119.1
C12 N11 C13 H133 184.3 359.1
C13 N11 C12 C06 183.2 180.2
N05 C06 N11 C12 180.9 180.3
C12 N11 C06 C01 3.0 0.1
C10 C09 C12 O14 179.2 180.8
N11 C12 O14 C09 181.6 180.4
O14 C12 C09 C19 2.5 1.7
O14 C12 N11 C13 1.7 359.3
O14 C12 N11 C06 178.5 179.1
C13 N11 C12 C09 183.3 179.7
C13 N11 C12 O14 1.7 359.3
C12 N11 C13 C06 176.9 179.8
H131 C13 N11 H132 240.0 119.9
H131 C13 N11 H133 120.0 240.0
H132 C13 N11 H133 240.0 120.1
N05 C06 N11 C13 357.9 0.1
C13 N11 C06 C01 180.0 179.9
N11 C13 H131 H132 120.0 239.2
N11 C13 H131 H133 240.0 120.9
H131 C13 N11 C06 127.4 59.3
H132 C13 H131 H133 120.1 241.7
N11 C13 H132 H131 240.0 120.7
N11 C13 H132 H133 119.9 239.0
H132 C13 N11 C06 247.4 299.4
H131 C13 H132 H133 239.9 118.3
N11 C13 H133 H131 120.0 239.2
N11 C13 H133 H132 240.0 120.9
H133 C13 N11 C06 7.4 179.3
H131 C13 H133 H132 120.0 241.7
C20 C15 C16 H15 180.0 180.0
C16 C15 C20 C19 2.9 0.0
C16 C15 C20 CL5 179.6 180.0
C17 C16 C15 H16 180.0 179.9
C15 C16 C17 C18 3.2 360.0
C15 C16 C17 H17 183.1 180.0
C16 C15 C20 H15 180.0 180.0
C20 C15 C16 C17 356.4 0.0
C20 C15 C16 H16 176.4 180.1
C15 C20 C19 C18 358.2 360.0
C15 C20 C19 C09 187.3 179.9
C19 C20 C15 CL5 183.3 180.0
C16 C15 H15 C20 180.0 180.0
H15 C15 C16 C17 176.4 180.0
H15 C15 C16 H16 356.4 0.1
H15 C15 C20 C19 182.9 180.0
H15 C15 C20 CL5 359.6 0.0
C17 C16 C15 C20 356.4 0.0
C17 C16 C15 H15 176.4 180.0
C15 C16 C17 H16 180.0 180.1
C19 C18 C17 C16 358.0 0.1
C16 C17 C18 CL4 179.4 180.0
C18 C17 C16 H17 180.0 179.9
H16 C16 C15 C20 176.4 180.1
H16 C16 C15 H15 356.4 0.1
C15 C16 H16 C17 180.0 179.9
H16 C16 C17 C18 183.1 179.9
H16 C16 C17 H17 3.1 360.0
C16 C17 C18 C19 358.0 0.1
C20 C19 C18 C09 188.8 180.0
C18 C19 C20 CL5 181.6 180.0
C17 C18 C19 CL4 181.6 179.9
C19 C18 C17 H17 178.0 180.0
C19 C09 C10 C01 178.8 179.2
C19 C09 C10 H10 358.7 359.4
C10 C09 C19 C12 183.3 180.9
C20 C19 C09 C18 171.0 180.0
C09 C19 C18 CL4 350.9 0.1
C09 C19 C18 C17 172.5 180.0
C09 C19 C20 CL5 10.7 359.9
C10 C09 C19 C20 260.5 90.0
C12 C09 C19 C20 77.1 269.1
C19 C20 C15 H15 182.9 180.0
C15 C20 C19 CL5 176.6 180.0
C09 C19 C20 C18 189.1 180.0
C20 C19 C18 CL4 179.7 180.1
C20 C19 C18 C17 1.3 360.0
CL5 C20 C15 H15 359.6 0.0
C15 C20 CL5 C19 183.3 180.0
CL5 C20 C19 C18 181.6 180.0
CL5 C20 C19 C09 10.7 359.9
C26 C27 C28 N08 186.1 180.2
C28 C27 N08 C04 162.4 330.1
C28 C27 N08 HN08 342.4 150.1
C28 C27 C26 C31 355.2 359.9
C28 C27 C26 H26 175.2 180.0
C30 C29 C28 C27 353.1 360.0
C34 C29 C28 C27 178.2 179.9
C29 C28 C27 H28 180.0 180.0
C28 C27 N08 C26 187.2 180.2
N08 C27 C28 C29 181.3 179.9
N08 C27 C28 H28 1.3 359.9
N08 C27 C26 C31 182.4 180.1
N08 C27 C26 H26 2.4 0.1
C04 N08 C27 HN08 180.0 180.0
C27 N08 C04 N03 189.3 180.0
C27 N08 C04 N05 10.5 360.0
C28 C27 C26 N08 172.8 179.8
C26 C27 C28 C29 7.3 0.1
C26 C27 C28 H28 187.3 180.0
C26 C27 N08 C04 335.2 149.9
C26 C27 N08 HN08 155.2 329.9
C30 C31 C26 C27 1.2 0.1
C27 C26 C31 H31 181.2 180.0
C31 C26 C27 H26 180.0 179.9
C27 C28 C29 C30 353.1 360.0
C31 C30 C29 F35 177.9 180.0
C29 C30 C31 C26 359.9 360.0
C29 C30 C31 H31 179.9 180.1
C30 C29 C34 H341 323.6 323.2
C30 C29 C34 H342 83.5 83.7
C30 C29 C34 H343 203.5 202.7
C34 C29 C30 C28 175.1 180.1
C30 C29 C28 H28 173.1 180.0
C31 C30 F35 C29 182.1 180.0
F35 C30 C29 C34 0.2 0.0
F35 C30 C29 C28 185.1 180.0
F35 C30 C31 C26 177.9 180.0
F35 C30 C31 H31 357.9 0.1
C27 C26 C31 C30 1.2 0.1
F35 C30 C31 C29 178.0 180.0
C31 C30 C29 C34 178.1 180.1
C31 C30 C29 C28 3.0 360.0
C26 C31 C30 H31 180.0 179.9
C30 C31 C26 H26 181.2 180.0
C31 C26 C27 N08 182.4 180.1
C27 C26 C31 H26 180.0 180.1
C26 C31 C30 C29 359.9 360.0
C26 C31 C30 F35 177.9 180.0
C30 C31 C26 H31 180.0 180.1
H31 C31 C30 C29 179.9 180.1
H31 C31 C30 F35 357.9 0.1
C30 C31 H31 C26 180.0 179.9
H31 C31 C26 H26 1.2 359.9
C27 C28 C29 C34 178.2 179.9
C30 C29 C34 C28 184.8 179.9
H341 C34 C29 H342 240.0 239.5
H341 C34 C29 H343 120.0 120.5
H342 C34 C29 H343 240.0 241.0
C34 C29 C28 H28 358.2 360.0
C29 C34 H341 H342 120.0 122.2
C29 C34 H341 H343 240.0 237.8
H341 C34 C29 C28 138.8 143.3
H342 C34 H341 H343 120.0 115.6
C29 C34 H342 H341 240.0 238.4
C29 C34 H342 H343 120.0 121.6
H342 C34 C29 C28 258.8 263.8
H341 C34 H342 H343 240.0 243.3
C29 C34 H343 H341 120.0 121.6
C29 C34 H343 H342 240.0 238.3
H343 C34 C29 C28 18.8 22.8
H341 C34 H343 H342 120.0 116.7
C29 C28 C27 N08 181.3 179.9
C29 C28 C27 C26 7.3 0.1
C27 C28 C29 H28 180.0 180.0
C30 C29 C28 C34 174.9 180.1
C28 C29 C34 H341 138.8 143.3
C28 C29 C34 H342 258.8 263.8
C28 C29 C34 H343 18.8 22.8
H28 C28 C27 N08 1.3 359.9
H28 C28 C27 C26 187.3 180.0
C27 C28 H28 C29 180.0 180.0
H26 C26 C27 N08 2.4 0.1
C27 C26 H26 C31 180.0 179.9
H26 C26 C31 H31 1.2 359.9
C27 N08 C04 HN08 180.0 180.0
N03 C04 N08 N05 178.8 180.1
N08 C04 N03 C02 179.0 180.0
N08 C04 N05 C06 179.9 180.0
C27 N08 HN08 C04 180.0 180.0
HN08 N08 C04 N03 9.3 0.1
HN08 N08 C04 N05 190.5 180.0
N03 C04 N08 HN08 9.3 0.1
N08 C04 N03 N05 181.2 179.9
N03 C04 N05 C06 1.3 359.9
C04 N03 C02 C01 2.4 360.0
C04 N03 C02 H02 182.3 180.0
N05 C04 N08 HN08 190.5 180.0
N08 C04 N05 N03 178.7 180.1
N05 C04 N03 C02 357.8 0.0
C04 N05 C06 C01 359.3 0.1
C04 N05 C06 N11 181.4 179.9
C10 C01 C02 N03 180.6 179.8
C02 N03 C04 N05 357.8 0.0
C01 C02 N03 H02 180.0 180.0
N03 C02 C01 C06 358.1 0.1
C02 C01 C10 H10 358.5 359.6
C10 C01 C02 C06 182.5 179.7
N03 C02 C01 H02 180.0 180.0
N05 C06 C01 C02 1.1 359.9
N11 C06 C01 C02 178.9 180.1
N03 C02 H02 C01 180.0 180.0
H02 C02 C01 C06 178.1 180.1
C10 C01 C06 N05 178.6 180.2
C12 N11 C06 N05 180.9 180.3
C13 N11 C06 N05 357.9 0.1
C02 C01 C06 N05 1.1 359.9
N11 C06 N05 C01 182.1 179.8
C06 C01 C10 H10 181.0 179.3
C10 C01 C06 C02 177.6 180.3
C06 C01 C02 H02 178.1 180.1
N05 C06 C01 N11 182.2 179.8
C10 C01 C06 N11 356.5 0.4
C06 N11 C12 C09 0.2 359.5
C06 N11 C12 O14 178.5 179.1
C12 N11 C06 C13 183.0 180.2
C06 N11 C13 H131 127.4 59.3
C06 N11 C13 H132 247.4 299.4
C06 N11 C13 H133 7.4 179.3
C02 C01 C06 N11 178.9 180.1
N05 C06 N11 C01 177.9 180.2
C19 C18 CL4 C17 181.4 179.9
CL4 C18 C17 H17 359.4 359.9
C18 C17 C16 H16 183.1 179.9
C16 C17 C18 H17 180.0 180.1
C19 C18 C17 CL4 178.6 180.1
H17 C17 C16 H16 3.1 360.0
C16 C17 H17 C18 180.0 179.9
H17 C17 C18 CL4 359.4 359.9