PDB Chemical Component JGP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for JGP
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C14 |
C15 |
1.374 |
1.548 |
| C14 |
C13 |
1.448 |
1.471 |
| C15 |
N09 |
1.421 |
1.446 |
| C11 |
C10 |
1.369 |
1.540 |
| C11 |
C12 |
1.435 |
1.509 |
| C13 |
C12 |
1.519 |
1.525 |
| C10 |
N09 |
1.516 |
1.476 |
| N09 |
C07 |
1.401 |
1.347 |
| O16 |
C04 |
1.299 |
1.365 |
| O16 |
C17 |
1.365 |
1.439 |
| C05 |
C04 |
1.345 |
1.381 |
| C05 |
C06 |
1.398 |
1.398 |
| C07 |
C06 |
1.472 |
1.476 |
| C07 |
O08 |
1.155 |
1.216 |
| C04 |
C03 |
1.377 |
1.396 |
| C06 |
C01 |
1.327 |
1.397 |
| C17 |
O18 |
1.314 |
1.440 |
| C03 |
O18 |
1.288 |
1.364 |
| C03 |
C02 |
1.335 |
1.388 |
| C01 |
C02 |
1.365 |
1.378 |
| C10 |
H101 |
1.100 |
1.089 |
| C10 |
H102 |
1.100 |
1.091 |
| C13 |
H132 |
1.100 |
1.090 |
| C13 |
H131 |
1.100 |
1.090 |
| C15 |
H152 |
1.100 |
1.090 |
| C15 |
H151 |
1.099 |
1.090 |
| C17 |
H171 |
1.100 |
1.090 |
| C17 |
H172 |
1.100 |
1.089 |
| C01 |
H011 |
1.080 |
1.080 |
| C02 |
H021 |
1.080 |
1.080 |
| C05 |
H051 |
1.080 |
1.080 |
| C11 |
H111 |
1.100 |
1.089 |
| C11 |
H112 |
1.100 |
1.090 |
| C12 |
H121 |
1.100 |
1.091 |
| C12 |
H122 |
1.099 |
1.091 |
| C14 |
H142 |
1.101 |
1.091 |
| C14 |
H141 |
1.100 |
1.090 |
Bond Angles for JGP
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C14 |
C15 |
H152 |
107.8 |
109.4 |
| C14 |
C15 |
H151 |
107.8 |
109.4 |
| C14 |
C13 |
H132 |
107.7 |
108.6 |
| C14 |
C13 |
H131 |
107.7 |
108.4 |
| C10 |
N09 |
C15 |
115.8 |
122.7 |
| C15 |
N09 |
C07 |
122.3 |
118.6 |
| N09 |
C15 |
H152 |
107.8 |
109.5 |
| N09 |
C15 |
H151 |
107.8 |
109.4 |
| C11 |
C10 |
H101 |
106.4 |
108.9 |
| C11 |
C10 |
H102 |
106.4 |
108.9 |
| C13 |
C12 |
C11 |
111.6 |
109.4 |
| C12 |
C11 |
H111 |
108.1 |
109.4 |
| C12 |
C11 |
H112 |
108.1 |
109.4 |
| C11 |
C12 |
H121 |
108.9 |
109.5 |
| C11 |
C12 |
H122 |
108.9 |
109.5 |
| C12 |
C13 |
H132 |
107.7 |
108.5 |
| C12 |
C13 |
H131 |
107.7 |
108.5 |
| C13 |
C12 |
H121 |
108.9 |
109.5 |
| C13 |
C12 |
H122 |
108.9 |
109.5 |
| C10 |
N09 |
C07 |
121.5 |
118.7 |
| N09 |
C10 |
H101 |
106.5 |
108.9 |
| N09 |
C10 |
H102 |
106.5 |
108.9 |
| O16 |
C17 |
O18 |
109.8 |
103.8 |
| O16 |
C17 |
H171 |
109.4 |
110.6 |
| O16 |
C17 |
H172 |
109.4 |
110.7 |
| C06 |
C05 |
H051 |
120.2 |
120.1 |
| C04 |
C03 |
O18 |
110.1 |
108.6 |
| C06 |
C01 |
H011 |
118.0 |
120.0 |
| C17 |
O18 |
C03 |
105.6 |
105.5 |
| O18 |
C17 |
H171 |
109.4 |
110.5 |
| O18 |
C17 |
H172 |
109.4 |
110.5 |
| C03 |
C02 |
H021 |
121.2 |
119.9 |
| C02 |
C01 |
H011 |
117.9 |
120.0 |
| C01 |
C02 |
H021 |
121.2 |
119.9 |
| H101 |
C10 |
H102 |
109.4 |
108.9 |
| H132 |
C13 |
H131 |
109.5 |
108.4 |
| H152 |
C15 |
H151 |
109.5 |
109.4 |
| H171 |
C17 |
H172 |
109.5 |
110.5 |
| H111 |
C11 |
H112 |
109.5 |
109.3 |
| H121 |
C12 |
H122 |
109.5 |
109.5 |
| H142 |
C14 |
H141 |
109.5 |
109.2 |
Torsion Angles for JGP
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C15 |
C14 |
C13 |
H132 |
197.8 |
301.5 |
| C15 |
C14 |
C13 |
H131 |
315.7 |
183.9 |
| N09 |
C15 |
C14 |
H152 |
239.0 |
120.1 |
| N09 |
C15 |
C14 |
H151 |
121.0 |
239.9 |
| H152 |
C15 |
C14 |
H151 |
241.9 |
119.8 |
| C12 |
C13 |
C14 |
H132 |
239.0 |
121.3 |
| C12 |
C13 |
C14 |
H131 |
121.0 |
238.9 |
| C14 |
C13 |
C12 |
H121 |
236.1 |
34.9 |
| C14 |
C13 |
C12 |
H122 |
116.7 |
155.0 |
| H132 |
C13 |
C14 |
H131 |
242.1 |
117.6 |
| C14 |
C15 |
N09 |
H152 |
121.0 |
239.9 |
| C14 |
C15 |
N09 |
H151 |
239.0 |
120.1 |
| C10 |
N09 |
C15 |
C07 |
173.0 |
179.9 |
| C15 |
N09 |
C10 |
H101 |
283.6 |
78.6 |
| C15 |
N09 |
C10 |
H102 |
166.9 |
197.3 |
| H152 |
C15 |
N09 |
H151 |
118.1 |
240.1 |
| N09 |
C10 |
C11 |
H101 |
238.3 |
120.7 |
| N09 |
C10 |
C11 |
H102 |
121.7 |
239.4 |
| H101 |
C10 |
C11 |
H102 |
243.3 |
118.7 |
| C12 |
C11 |
C10 |
H101 |
161.5 |
198.8 |
| C12 |
C11 |
C10 |
H102 |
278.2 |
80.1 |
| C11 |
C12 |
C13 |
H132 |
235.3 |
36.3 |
| C11 |
C12 |
C13 |
H131 |
117.4 |
153.9 |
| C13 |
C12 |
C11 |
H121 |
239.7 |
120.0 |
| C13 |
C12 |
C11 |
H122 |
120.3 |
240.0 |
| H111 |
C11 |
C12 |
H112 |
118.4 |
119.6 |
| H121 |
C12 |
C11 |
H122 |
240.6 |
120.0 |
| C14 |
C13 |
C12 |
H132 |
121.0 |
238.7 |
| C14 |
C13 |
C12 |
H131 |
239.0 |
121.1 |
| C13 |
C12 |
C11 |
H111 |
171.4 |
331.7 |
| C13 |
C12 |
C11 |
H112 |
53.0 |
212.1 |
| C11 |
C12 |
C13 |
H121 |
120.3 |
240.0 |
| C11 |
C12 |
C13 |
H122 |
239.7 |
120.0 |
| H132 |
C13 |
C12 |
H131 |
117.9 |
242.4 |
| H121 |
C12 |
C13 |
H122 |
119.4 |
240.0 |
| C15 |
N09 |
C10 |
C07 |
187.0 |
180.1 |
| C10 |
N09 |
C15 |
H152 |
194.7 |
210.8 |
| C10 |
N09 |
C15 |
H151 |
76.6 |
330.6 |
| C11 |
C10 |
N09 |
H101 |
121.6 |
239.3 |
| C11 |
C10 |
N09 |
H102 |
238.3 |
120.6 |
| H101 |
C10 |
N09 |
H102 |
116.7 |
241.3 |
| C10 |
N09 |
C07 |
C15 |
187.4 |
180.1 |
| C07 |
N09 |
C15 |
H152 |
21.7 |
30.9 |
| C07 |
N09 |
C15 |
H151 |
263.6 |
150.7 |
| C07 |
N09 |
C10 |
H101 |
96.7 |
258.5 |
| C07 |
N09 |
C10 |
H102 |
340.0 |
17.2 |
| C04 |
O16 |
C17 |
O18 |
15.4 |
332.8 |
| C04 |
O16 |
C17 |
H171 |
135.4 |
91.4 |
| C04 |
O16 |
C17 |
H172 |
255.3 |
214.2 |
| O16 |
C04 |
C03 |
O18 |
2.3 |
0.0 |
| O16 |
C17 |
O18 |
C03 |
346.2 |
27.2 |
| O18 |
C17 |
O16 |
H171 |
240.0 |
241.4 |
| O18 |
C17 |
O16 |
H172 |
120.0 |
118.6 |
| H171 |
C17 |
O16 |
H172 |
240.1 |
237.2 |
| C05 |
C04 |
C03 |
O18 |
180.9 |
180.0 |
| C05 |
C06 |
C01 |
H011 |
179.6 |
180.0 |
| C15 |
N09 |
C07 |
C06 |
355.9 |
185.7 |
| C10 |
N09 |
C07 |
C06 |
183.3 |
5.8 |
| C07 |
C06 |
C05 |
H051 |
359.5 |
0.0 |
| C07 |
C06 |
C01 |
H011 |
0.9 |
0.1 |
| C15 |
N09 |
C07 |
O08 |
177.5 |
5.7 |
| C10 |
N09 |
C07 |
O08 |
5.0 |
185.8 |
| C17 |
O18 |
C03 |
C04 |
7.2 |
342.6 |
| C04 |
C03 |
C02 |
H021 |
181.5 |
180.0 |
| C02 |
C01 |
C06 |
H011 |
180.0 |
179.9 |
| C06 |
C01 |
C02 |
H021 |
179.3 |
180.0 |
| O16 |
C17 |
O18 |
H171 |
120.1 |
118.6 |
| O16 |
C17 |
O18 |
H172 |
240.0 |
241.3 |
| C04 |
C03 |
O18 |
C17 |
7.2 |
342.6 |
| H171 |
C17 |
O18 |
H172 |
119.9 |
122.7 |
| C03 |
O18 |
C17 |
H171 |
226.1 |
268.7 |
| C03 |
O18 |
C17 |
H172 |
106.2 |
146.0 |
| O18 |
C03 |
C02 |
H021 |
359.0 |
359.9 |
| C17 |
O18 |
C03 |
C02 |
189.4 |
162.7 |
| C03 |
C02 |
C01 |
H011 |
179.3 |
180.0 |
| C01 |
C02 |
C03 |
H021 |
180.0 |
180.0 |
| C06 |
C01 |
C02 |
H011 |
180.0 |
180.1 |
| C03 |
C02 |
C01 |
H021 |
180.0 |
180.0 |
| H101 |
C10 |
N09 |
C15 |
283.6 |
78.6 |
| C11 |
C10 |
H101 |
H102 |
114.6 |
241.4 |
| H101 |
C10 |
N09 |
C07 |
96.7 |
258.5 |
| N09 |
C10 |
H101 |
H102 |
245.3 |
118.7 |
| H102 |
C10 |
N09 |
C15 |
166.9 |
197.3 |
| C11 |
C10 |
H102 |
H101 |
245.4 |
118.7 |
| H102 |
C10 |
N09 |
C07 |
340.0 |
17.2 |
| N09 |
C10 |
H102 |
H101 |
114.7 |
241.3 |
| C14 |
C13 |
H132 |
H131 |
116.8 |
242.5 |
| H132 |
C13 |
C12 |
C11 |
235.3 |
36.3 |
| C12 |
C13 |
H132 |
H131 |
243.2 |
117.7 |
| H132 |
C13 |
C12 |
H121 |
115.0 |
156.3 |
| H132 |
C13 |
C12 |
H122 |
355.6 |
276.3 |
| C14 |
C13 |
H131 |
H132 |
243.2 |
117.6 |
| H131 |
C13 |
C12 |
C11 |
117.4 |
153.9 |
| C12 |
C13 |
H131 |
H132 |
116.8 |
242.3 |
| H131 |
C13 |
C12 |
H121 |
357.1 |
273.9 |
| H131 |
C13 |
C12 |
H122 |
237.7 |
33.9 |
| C14 |
C15 |
H152 |
H151 |
117.0 |
240.1 |
| H152 |
C15 |
N09 |
C07 |
21.7 |
30.9 |
| N09 |
C15 |
H152 |
H151 |
243.0 |
119.9 |
| C14 |
C15 |
H151 |
H152 |
243.0 |
119.9 |
| H151 |
C15 |
N09 |
C07 |
263.6 |
150.7 |
| N09 |
C15 |
H151 |
H152 |
117.0 |
240.1 |
| O16 |
C17 |
H171 |
O18 |
239.7 |
245.7 |
| O16 |
C17 |
H171 |
H172 |
119.9 |
123.0 |
| H171 |
C17 |
O18 |
C03 |
226.1 |
268.7 |
| O18 |
C17 |
H171 |
H172 |
240.2 |
237.3 |
| O16 |
C17 |
H172 |
O18 |
120.3 |
114.4 |
| O16 |
C17 |
H172 |
H171 |
240.1 |
237.1 |
| H172 |
C17 |
O18 |
C03 |
106.2 |
146.0 |
| O18 |
C17 |
H172 |
H171 |
119.8 |
122.7 |
| H011 |
C01 |
C02 |
H021 |
359.3 |
360.0 |
| H021 |
C02 |
C01 |
H011 |
359.3 |
360.0 |
| H111 |
C11 |
C10 |
H101 |
282.3 |
318.9 |
| H111 |
C11 |
C10 |
H102 |
39.0 |
200.3 |
| C12 |
C11 |
H111 |
H112 |
242.5 |
240.3 |
| H111 |
C11 |
C12 |
H121 |
291.7 |
211.7 |
| H111 |
C11 |
C12 |
H122 |
51.1 |
91.7 |
| H112 |
C11 |
C10 |
H101 |
40.7 |
78.6 |
| H112 |
C11 |
C10 |
H102 |
157.4 |
319.9 |
| C12 |
C11 |
H112 |
H111 |
117.5 |
119.7 |
| H112 |
C11 |
C12 |
H121 |
173.3 |
92.1 |
| H112 |
C11 |
C12 |
H122 |
292.7 |
332.1 |
| C13 |
C12 |
H121 |
C11 |
121.9 |
240.1 |
| H121 |
C12 |
C11 |
H111 |
291.7 |
211.7 |
| H121 |
C12 |
C11 |
H112 |
173.3 |
92.1 |
| C11 |
C12 |
H121 |
H122 |
119.0 |
240.0 |
| H121 |
C12 |
C13 |
H132 |
115.0 |
156.3 |
| H121 |
C12 |
C13 |
H131 |
357.1 |
273.9 |
| C13 |
C12 |
H121 |
H122 |
241.0 |
120.1 |
| C13 |
C12 |
H122 |
C11 |
238.1 |
119.9 |
| H122 |
C12 |
C11 |
H111 |
51.1 |
91.7 |
| H122 |
C12 |
C11 |
H112 |
292.7 |
332.1 |
| C11 |
C12 |
H122 |
H121 |
241.0 |
120.1 |
| H122 |
C12 |
C13 |
H132 |
355.6 |
276.3 |
| H122 |
C12 |
C13 |
H131 |
237.7 |
33.9 |
| C13 |
C12 |
H122 |
H121 |
119.0 |
240.0 |
| H142 |
C14 |
C15 |
H152 |
204.7 |
48.4 |
| H142 |
C14 |
C15 |
H151 |
322.8 |
288.5 |
| H142 |
C14 |
C13 |
H132 |
76.8 |
61.7 |
| H142 |
C14 |
C13 |
H131 |
194.8 |
304.2 |
| H141 |
C14 |
C15 |
H152 |
322.8 |
288.9 |
| H141 |
C14 |
C15 |
H151 |
80.9 |
169.0 |
| H141 |
C14 |
C13 |
H132 |
318.7 |
181.3 |
| H141 |
C14 |
C13 |
H131 |
76.7 |
63.7 |