PDB Chemical Component JFM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for JFM

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O04 S02 1.371 1.421
N05 S02 1.600 1.656
N05 C06 1.526 1.464
S02 O03 1.360 1.421
S02 C01 1.649 1.814
C07 C06 1.611 1.531
C07 C08 1.521 1.507
C09 C08 1.370 1.383
C09 C10 1.381 1.382
C08 C13 1.363 1.383
C10 C11 1.382 1.383
C13 C12 1.389 1.382
C11 C12 1.377 1.382
C10 H101 1.080 1.080
C13 H131 1.080 1.080
C01 H011 1.100 1.090
C01 H012 1.100 1.090
C01 H013 1.100 1.091
N05 H051 1.001 0.970
C06 H061 1.100 1.090
C06 H062 1.100 1.090
C07 H071 1.100 1.090
C07 H072 1.100 1.090
C09 H091 1.080 1.080
C11 H111 1.080 1.081
C12 H121 1.080 1.080

Bond Angles for JFM

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C06 N05 H051 105.6 120.0
N05 C06 H061 107.9 109.5
N05 C06 H062 107.9 109.5
S02 C01 H011 109.5 109.5
S02 C01 H012 109.5 109.5
S02 C01 H013 109.5 109.5
C07 C06 H061 107.9 109.4
C07 C06 H062 107.9 109.4
C08 C07 H071 109.2 109.5
C08 C07 H072 109.2 109.5
C09 C10 C11 119.4 120.0
C09 C10 H101 120.3 120.0
C08 C13 C12 120.5 120.0
C08 C13 H131 119.7 120.0
C10 C11 C12 118.8 120.0
C11 C10 H101 120.3 120.0
C10 C11 H111 120.6 120.0
C13 C12 C11 120.7 120.1
C12 C13 H131 119.7 120.1
C13 C12 H121 119.6 120.0
C12 C11 H111 120.6 120.0
C11 C12 H121 119.6 120.0
H011 C01 H012 109.5 109.5
H011 C01 H013 109.4 109.5
H012 C01 H013 109.5 109.5
H061 C06 H062 109.5 109.5
H071 C07 H072 109.5 109.5

Torsion Angles for JFM

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O04 S02 C01 H011 180.0 188.3
O04 S02 C01 H012 300.0 308.4
O04 S02 C01 H013 60.0 68.3
N05 S02 C01 H011 291.7 300.0
N05 S02 C01 H012 51.7 60.0
N05 S02 C01 H013 171.7 180.0
C07 C06 N05 H061 239.1 240.0
C07 C06 N05 H062 120.9 119.9
H061 C06 N05 H062 241.8 239.9
O03 S02 C01 H011 50.9 51.6
O03 S02 C01 H012 170.9 171.6
O03 S02 C01 H013 290.9 291.6
H011 C01 S02 H012 240.0 239.9
H011 C01 S02 H013 120.0 120.0
H012 C01 S02 H013 240.0 240.0
C07 C06 N05 H051 32.4 345.0
N05 C06 C07 H061 120.9 120.0
N05 C06 C07 H062 239.1 240.0
H061 C06 C07 H062 118.2 120.0
C08 C07 C06 H061 99.1 60.0
C08 C07 C06 H062 340.9 300.0
C07 C08 C13 C12 176.9 179.9
C07 C08 C13 H131 356.8 0.6
H071 C07 C08 H072 119.7 120.1
C09 C08 C07 H071 333.2 150.9
C09 C08 C07 H072 213.5 30.8
C08 C09 C10 C11 0.1 0.1
C08 C09 C10 H101 180.1 179.8
C09 C08 C13 C12 0.5 359.1
C09 C08 C13 H131 180.5 179.8
C09 C10 C11 C12 359.5 359.7
C11 C10 C09 H101 180.0 180.3
C09 C10 C11 H111 179.5 179.6
C08 C13 C12 C11 359.1 0.7
C12 C13 C08 H131 180.0 179.4
C08 C13 C12 H121 179.1 180.0
C09 C10 C11 H101 180.0 179.7
C13 C12 C11 C10 0.8 359.9
C12 C11 C10 H111 180.0 180.1
C10 C11 C12 H121 180.9 180.6
C08 C13 C12 H131 180.0 180.6
C10 C11 C12 C13 0.8 359.9
C13 C12 C11 H111 180.8 180.0
C11 C12 C13 H121 180.0 180.7
C12 C11 C10 H101 179.6 180.0
C10 C11 C12 H111 180.0 179.9
C11 C12 C13 H131 179.1 180.0
C13 C12 C11 H121 180.0 179.3
C09 C10 H101 C11 180.0 180.3
H101 C10 C11 C12 179.6 180.0
H101 C10 C11 H111 359.6 359.9
C08 C13 H131 C12 180.0 179.4
H131 C13 C12 C11 179.1 180.0
H131 C13 C12 H121 359.1 359.3
S02 C01 H011 H012 120.0 120.0
S02 C01 H011 H013 240.0 240.0
H012 C01 H011 H013 120.0 120.0
S02 C01 H012 H011 239.9 240.0
S02 C01 H012 H013 120.0 120.0
H011 C01 H012 H013 240.0 240.0
S02 C01 H013 H011 120.0 120.0
S02 C01 H013 H012 240.0 240.0
H011 C01 H013 H012 120.0 120.1
H051 N05 C06 H061 153.3 104.9
H051 N05 C06 H062 271.5 225.0
H061 C06 N05 H051 153.3 104.9
N05 C06 H061 H062 117.2 120.1
C07 C06 H061 H062 242.8 240.1
H062 C06 N05 H051 271.5 225.0
N05 C06 H062 H061 242.7 239.9
C07 C06 H062 H061 117.2 119.9
H071 C07 C06 H061 219.3 180.0
H071 C07 C06 H062 101.1 60.0
C08 C07 H071 H072 240.5 239.9
H072 C07 C06 H061 338.9 300.0
H072 C07 C06 H062 220.7 180.0
C08 C07 H072 H071 119.5 120.1
H091 C09 C10 C11 180.2 179.9
H091 C09 C10 H101 0.1 359.6
C10 C11 H111 C12 180.0 180.1
H111 C11 C10 H101 359.6 359.9
H111 C11 C12 H121 0.9 0.7
C13 C12 H121 C11 180.0 180.7
H121 C12 C13 H131 359.1 359.3
H121 C12 C11 H111 0.9 0.7