PDB Chemical Component J94
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for J94
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O12 |
C11 |
1.393 |
1.439 |
| O12 |
C13 |
1.380 |
1.365 |
| C11 |
O10 |
1.408 |
1.439 |
| C14 |
C13 |
1.445 |
1.383 |
| C14 |
C06 |
1.426 |
1.387 |
| C13 |
C09 |
1.341 |
1.393 |
| C05 |
C06 |
1.446 |
1.507 |
| C05 |
C04 |
1.489 |
1.530 |
| O10 |
C09 |
1.388 |
1.365 |
| C06 |
C07 |
1.351 |
1.379 |
| C09 |
C08 |
1.413 |
1.384 |
| C04 |
N02 |
1.463 |
1.471 |
| C07 |
C08 |
1.442 |
1.387 |
| C07 |
C15 |
1.545 |
1.506 |
| O19 |
C18 |
1.202 |
1.215 |
| C01 |
N02 |
1.508 |
1.468 |
| N02 |
C15 |
1.510 |
1.466 |
| N02 |
C03 |
1.430 |
1.469 |
| O17 |
C18 |
1.400 |
1.343 |
| O17 |
C16 |
1.412 |
1.454 |
| C18 |
C20 |
1.471 |
1.472 |
| C15 |
C16 |
1.458 |
1.529 |
| C16 |
C28 |
1.524 |
1.508 |
| C20 |
C21 |
1.449 |
1.399 |
| C20 |
C28 |
1.339 |
1.400 |
| O22 |
C21 |
1.405 |
1.363 |
| O22 |
C23 |
1.389 |
1.439 |
| C21 |
C25 |
1.365 |
1.393 |
| C28 |
C27 |
1.442 |
1.373 |
| C23 |
O24 |
1.407 |
1.440 |
| C25 |
O24 |
1.389 |
1.366 |
| C25 |
C26 |
1.405 |
1.384 |
| C27 |
C26 |
1.365 |
1.387 |
| C01 |
H1 |
1.100 |
1.090 |
| C01 |
H2 |
1.100 |
1.090 |
| C01 |
H3 |
1.100 |
1.091 |
| C03 |
H4 |
1.100 |
1.089 |
| C03 |
H5 |
1.100 |
1.090 |
| C03 |
H6 |
1.100 |
1.090 |
| C04 |
H7 |
1.100 |
1.090 |
| C05 |
H8 |
1.100 |
1.090 |
| C08 |
H9 |
1.080 |
1.081 |
| C11 |
H10 |
1.100 |
1.090 |
| C11 |
H11 |
1.100 |
1.091 |
| C14 |
H12 |
1.080 |
1.080 |
| C15 |
H13 |
1.100 |
1.090 |
| C16 |
H14 |
1.100 |
1.091 |
| C23 |
H15 |
1.100 |
1.089 |
| C23 |
H16 |
1.100 |
1.090 |
| C26 |
H17 |
1.080 |
1.080 |
| C27 |
H18 |
1.080 |
1.080 |
| C04 |
H19 |
1.100 |
1.089 |
| C05 |
H20 |
1.100 |
1.089 |
Bond Angles for J94
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O12 |
C11 |
H10 |
110.3 |
110.6 |
| O12 |
C11 |
H11 |
110.3 |
110.7 |
| C05 |
C06 |
C07 |
121.1 |
121.5 |
| C06 |
C05 |
H8 |
107.3 |
109.5 |
| C06 |
C05 |
H20 |
107.3 |
109.5 |
| C05 |
C04 |
H7 |
107.2 |
109.6 |
| C05 |
C04 |
H19 |
107.2 |
109.8 |
| C06 |
C07 |
C08 |
120.5 |
119.9 |
| C06 |
C07 |
C15 |
120.7 |
121.7 |
| C09 |
C08 |
H9 |
120.3 |
119.8 |
| C04 |
N02 |
C15 |
113.4 |
109.0 |
| C08 |
C07 |
C15 |
118.8 |
118.5 |
| C07 |
C08 |
H9 |
120.3 |
119.8 |
| N02 |
C15 |
C07 |
110.6 |
110.6 |
| C07 |
C15 |
C16 |
111.4 |
109.2 |
| C07 |
C15 |
H13 |
106.6 |
109.2 |
| O19 |
C18 |
C20 |
127.6 |
124.8 |
| C01 |
N02 |
C15 |
108.6 |
109.6 |
| C01 |
N02 |
C03 |
107.2 |
109.6 |
| N02 |
C01 |
H1 |
109.5 |
109.5 |
| N02 |
C01 |
H2 |
109.5 |
109.5 |
| N02 |
C01 |
H3 |
109.5 |
109.5 |
| C03 |
N02 |
C15 |
111.0 |
109.5 |
| N02 |
C15 |
C16 |
113.3 |
109.3 |
| N02 |
C15 |
H13 |
107.0 |
109.2 |
| N02 |
C03 |
H4 |
109.5 |
109.5 |
| N02 |
C03 |
H5 |
109.5 |
109.5 |
| N02 |
C03 |
H6 |
109.5 |
109.4 |
| O17 |
C18 |
C20 |
107.7 |
110.3 |
| O17 |
C16 |
C28 |
104.6 |
106.4 |
| O17 |
C16 |
H14 |
108.0 |
110.1 |
| C18 |
C20 |
C21 |
131.0 |
132.6 |
| C18 |
C20 |
C28 |
108.6 |
108.0 |
| C15 |
C16 |
C28 |
116.5 |
110.1 |
| C16 |
C15 |
H13 |
107.6 |
109.2 |
| C15 |
C16 |
H14 |
107.4 |
110.1 |
| C16 |
C28 |
C20 |
109.0 |
106.3 |
| C16 |
C28 |
C27 |
132.0 |
133.3 |
| C28 |
C16 |
H14 |
106.6 |
110.0 |
| C21 |
C20 |
C28 |
120.5 |
119.4 |
| C20 |
C21 |
C25 |
120.0 |
119.7 |
| C20 |
C28 |
C27 |
119.0 |
120.4 |
| O22 |
C21 |
C25 |
107.8 |
108.7 |
| O22 |
C23 |
O24 |
106.4 |
103.8 |
| O22 |
C23 |
H15 |
110.2 |
110.6 |
| O22 |
C23 |
H16 |
110.2 |
110.5 |
| C21 |
C25 |
O24 |
108.6 |
108.6 |
| C21 |
C25 |
C26 |
119.6 |
120.0 |
| C28 |
C27 |
H18 |
119.8 |
119.9 |
| O24 |
C23 |
H15 |
110.3 |
110.6 |
| O24 |
C23 |
H16 |
110.3 |
110.6 |
| C25 |
C26 |
H17 |
119.7 |
119.9 |
| C27 |
C26 |
H17 |
119.7 |
119.8 |
| H1 |
C01 |
H2 |
109.5 |
109.5 |
| H1 |
C01 |
H3 |
109.4 |
109.4 |
| H2 |
C01 |
H3 |
109.5 |
109.5 |
| H4 |
C03 |
H5 |
109.4 |
109.5 |
| H4 |
C03 |
H6 |
109.5 |
109.5 |
| H5 |
C03 |
H6 |
109.5 |
109.5 |
| H7 |
C04 |
H19 |
109.5 |
109.6 |
| H8 |
C05 |
H20 |
109.5 |
109.3 |
| H10 |
C11 |
H11 |
109.4 |
110.5 |
| H15 |
C23 |
H16 |
109.4 |
110.6 |
Torsion Angles for J94
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H10 |
C11 |
O12 |
H11 |
239.0 |
122.8 |
| C13 |
O12 |
C11 |
H10 |
140.3 |
268.5 |
| C13 |
O12 |
C11 |
H11 |
261.3 |
145.8 |
| C14 |
C06 |
C05 |
H8 |
286.3 |
43.4 |
| C14 |
C06 |
C05 |
H20 |
43.9 |
283.6 |
| C14 |
C06 |
C07 |
C15 |
179.6 |
180.4 |
| C13 |
C09 |
C08 |
H9 |
180.5 |
180.0 |
| C06 |
C05 |
C04 |
H7 |
118.3 |
291.3 |
| C06 |
C05 |
C04 |
H19 |
235.8 |
170.8 |
| C05 |
C06 |
C07 |
C08 |
180.0 |
180.1 |
| C05 |
C06 |
C07 |
C15 |
0.8 |
0.4 |
| H8 |
C05 |
C06 |
H20 |
242.4 |
119.8 |
| C05 |
C04 |
N02 |
C15 |
35.6 |
287.6 |
| H7 |
C04 |
C05 |
H19 |
242.5 |
120.5 |
| O10 |
C09 |
C08 |
H9 |
360.0 |
0.1 |
| C07 |
C06 |
C05 |
H8 |
105.1 |
223.4 |
| C07 |
C06 |
C05 |
H20 |
222.6 |
103.6 |
| C08 |
C07 |
C06 |
C15 |
179.1 |
179.7 |
| C06 |
C07 |
C08 |
H9 |
180.4 |
179.8 |
| N02 |
C15 |
C07 |
C06 |
31.3 |
341.4 |
| C06 |
C07 |
C15 |
C16 |
264.3 |
221.0 |
| C06 |
C07 |
C15 |
H13 |
147.2 |
101.6 |
| C09 |
C08 |
C07 |
C15 |
179.5 |
179.7 |
| C07 |
C08 |
C09 |
H9 |
180.0 |
179.9 |
| C04 |
N02 |
C15 |
C07 |
312.0 |
53.9 |
| C01 |
N02 |
C04 |
C15 |
241.7 |
240.1 |
| C04 |
N02 |
C01 |
H1 |
180.0 |
179.5 |
| C04 |
N02 |
C01 |
H2 |
300.0 |
299.5 |
| C04 |
N02 |
C01 |
H3 |
60.0 |
59.5 |
| C03 |
N02 |
C04 |
C15 |
126.2 |
119.8 |
| C04 |
N02 |
C15 |
C16 |
77.9 |
174.2 |
| C04 |
N02 |
C15 |
H13 |
196.3 |
293.6 |
| C04 |
N02 |
C03 |
H4 |
180.0 |
172.6 |
| C04 |
N02 |
C03 |
H5 |
300.0 |
292.6 |
| C04 |
N02 |
C03 |
H6 |
60.0 |
52.5 |
| C06 |
C07 |
C08 |
C15 |
180.8 |
180.3 |
| C09 |
C08 |
C07 |
H9 |
180.0 |
180.1 |
| N02 |
C15 |
C07 |
C08 |
212.1 |
161.6 |
| C08 |
C07 |
C15 |
C16 |
85.2 |
41.3 |
| C08 |
C07 |
C15 |
H13 |
328.1 |
281.9 |
| C06 |
C07 |
C15 |
C08 |
179.2 |
179.7 |
| C15 |
C07 |
C08 |
H9 |
359.5 |
359.6 |
| C01 |
N02 |
C15 |
C07 |
68.0 |
173.8 |
| C03 |
N02 |
C15 |
C07 |
185.6 |
294.0 |
| N02 |
C15 |
C07 |
C16 |
127.0 |
120.3 |
| N02 |
C15 |
C07 |
H13 |
244.1 |
239.7 |
| C07 |
C15 |
C16 |
C28 |
293.0 |
285.2 |
| C16 |
C15 |
C07 |
H13 |
117.1 |
119.4 |
| C07 |
C15 |
C16 |
H14 |
173.6 |
163.8 |
| O17 |
C18 |
O19 |
C20 |
182.6 |
180.0 |
| O19 |
C18 |
C20 |
C21 |
4.1 |
360.0 |
| O19 |
C18 |
C20 |
C28 |
184.3 |
180.0 |
| C04 |
N02 |
C01 |
C15 |
121.5 |
119.5 |
| C03 |
N02 |
C01 |
C15 |
239.9 |
239.8 |
| C01 |
N02 |
C15 |
C16 |
193.9 |
294.1 |
| C01 |
N02 |
C15 |
H13 |
312.3 |
53.5 |
| C01 |
N02 |
C03 |
H4 |
66.0 |
52.3 |
| C01 |
N02 |
C03 |
H5 |
186.0 |
172.3 |
| C01 |
N02 |
C03 |
H6 |
306.0 |
292.3 |
| H1 |
C01 |
N02 |
H2 |
240.0 |
240.0 |
| H1 |
C01 |
N02 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
N02 |
H3 |
240.0 |
240.0 |
| C06 |
C07 |
C15 |
N02 |
31.3 |
341.4 |
| C08 |
C07 |
C15 |
N02 |
212.1 |
161.6 |
| C07 |
C15 |
N02 |
C16 |
234.1 |
239.7 |
| C07 |
C15 |
N02 |
H13 |
115.7 |
120.3 |
| C01 |
N02 |
C15 |
C03 |
242.3 |
239.8 |
| C15 |
N02 |
C01 |
H1 |
58.5 |
60.0 |
| C15 |
N02 |
C01 |
H2 |
178.5 |
180.0 |
| C15 |
N02 |
C01 |
H3 |
298.6 |
300.0 |
| C15 |
N02 |
C03 |
H4 |
307.5 |
292.1 |
| C15 |
N02 |
C03 |
H5 |
67.4 |
52.1 |
| C15 |
N02 |
C03 |
H6 |
187.5 |
172.1 |
| N02 |
C15 |
C16 |
C28 |
167.4 |
164.1 |
| C16 |
C15 |
N02 |
H13 |
241.6 |
240.6 |
| N02 |
C15 |
C16 |
H14 |
48.0 |
42.6 |
| C04 |
N02 |
C03 |
C15 |
232.5 |
240.5 |
| C01 |
N02 |
C03 |
C15 |
118.5 |
120.2 |
| C03 |
N02 |
C01 |
H1 |
298.4 |
299.8 |
| C03 |
N02 |
C01 |
H2 |
58.4 |
59.8 |
| C03 |
N02 |
C01 |
H3 |
178.5 |
179.8 |
| C03 |
N02 |
C15 |
C16 |
311.6 |
54.3 |
| C03 |
N02 |
C15 |
H13 |
70.0 |
173.7 |
| H4 |
C03 |
N02 |
H5 |
240.0 |
240.0 |
| H4 |
C03 |
N02 |
H6 |
120.0 |
120.0 |
| H5 |
C03 |
N02 |
H6 |
240.0 |
240.1 |
| O19 |
C18 |
O17 |
C20 |
177.8 |
180.0 |
| C18 |
O17 |
C16 |
C28 |
0.8 |
0.0 |
| C18 |
O17 |
C16 |
H14 |
114.1 |
119.2 |
| O17 |
C18 |
C20 |
C21 |
181.9 |
180.0 |
| O17 |
C18 |
C20 |
C28 |
2.0 |
359.9 |
| C15 |
C16 |
O17 |
C28 |
232.1 |
240.8 |
| O17 |
C16 |
C15 |
H13 |
170.9 |
161.6 |
| C15 |
C16 |
O17 |
H14 |
118.8 |
121.6 |
| O17 |
C16 |
C28 |
C20 |
0.5 |
360.0 |
| O17 |
C16 |
C28 |
C27 |
179.5 |
180.0 |
| C28 |
C16 |
O17 |
H14 |
246.7 |
240.8 |
| C16 |
C28 |
C20 |
C18 |
358.5 |
0.1 |
| C21 |
C20 |
C18 |
C28 |
179.9 |
180.0 |
| C18 |
C20 |
C21 |
C25 |
180.5 |
180.0 |
| C18 |
C20 |
C28 |
C27 |
179.4 |
180.0 |
| N02 |
C15 |
C16 |
C07 |
234.5 |
238.8 |
| C07 |
C15 |
C16 |
H13 |
243.5 |
240.6 |
| N02 |
C15 |
C16 |
H13 |
118.0 |
119.4 |
| O17 |
C16 |
C15 |
C28 |
121.5 |
116.9 |
| O17 |
C16 |
C15 |
H14 |
240.9 |
238.4 |
| C15 |
C16 |
C28 |
C20 |
126.4 |
119.2 |
| C15 |
C16 |
C28 |
C27 |
305.4 |
299.3 |
| C28 |
C16 |
C15 |
H14 |
119.4 |
121.5 |
| O17 |
C16 |
C28 |
H14 |
114.3 |
119.3 |
| C18 |
C20 |
C28 |
C16 |
358.5 |
0.1 |
| C28 |
C16 |
C15 |
H13 |
49.4 |
44.6 |
| C15 |
C16 |
C28 |
H14 |
240.2 |
238.5 |
| C21 |
C20 |
C28 |
C16 |
178.6 |
180.0 |
| C20 |
C28 |
C16 |
C27 |
181.1 |
179.9 |
| C16 |
C28 |
C27 |
H18 |
0.7 |
359.9 |
| C18 |
C20 |
C21 |
C28 |
180.2 |
180.0 |
| C16 |
C28 |
C20 |
C21 |
178.6 |
180.0 |
| C21 |
C20 |
C28 |
C27 |
359.5 |
360.0 |
| O22 |
C21 |
C20 |
C25 |
179.5 |
180.0 |
| C20 |
C21 |
C25 |
O24 |
179.2 |
180.0 |
| C20 |
C21 |
C25 |
C26 |
0.8 |
359.9 |
| C18 |
C20 |
C28 |
C21 |
179.9 |
180.0 |
| C16 |
C28 |
C20 |
C27 |
179.1 |
180.1 |
| C20 |
C28 |
C16 |
H14 |
246.2 |
240.7 |
| C28 |
C20 |
C21 |
C25 |
0.3 |
0.1 |
| C20 |
C28 |
C27 |
H18 |
179.6 |
180.0 |
| O22 |
C21 |
C20 |
C28 |
179.8 |
180.1 |
| C20 |
C21 |
O22 |
C25 |
180.5 |
180.0 |
| O22 |
C21 |
C25 |
O24 |
359.6 |
360.0 |
| O22 |
C21 |
C25 |
C26 |
181.2 |
179.9 |
| C23 |
O22 |
C21 |
C25 |
349.0 |
342.8 |
| O24 |
C23 |
O22 |
H15 |
240.5 |
241.4 |
| O24 |
C23 |
O22 |
H16 |
119.5 |
118.5 |
| H15 |
C23 |
O22 |
H16 |
239.1 |
237.1 |
| C25 |
C21 |
C20 |
C28 |
0.3 |
0.1 |
| C21 |
C25 |
C26 |
H17 |
178.2 |
180.0 |
| C16 |
C28 |
C27 |
C20 |
181.2 |
179.9 |
| C27 |
C28 |
C16 |
H14 |
65.2 |
60.8 |
| C28 |
C27 |
C26 |
H17 |
181.6 |
180.0 |
| O22 |
C23 |
O24 |
H15 |
119.5 |
118.6 |
| O22 |
C23 |
O24 |
H16 |
240.5 |
241.5 |
| C21 |
C25 |
O24 |
C23 |
11.5 |
17.3 |
| H15 |
C23 |
O24 |
H16 |
121.0 |
122.8 |
| C21 |
C25 |
O24 |
C26 |
181.9 |
179.9 |
| C25 |
O24 |
C23 |
H15 |
222.3 |
214.3 |
| C25 |
O24 |
C23 |
H16 |
101.4 |
91.5 |
| C21 |
C25 |
C26 |
O24 |
178.0 |
180.1 |
| C27 |
C26 |
C25 |
H17 |
180.0 |
180.1 |
| C16 |
C28 |
C27 |
C26 |
180.7 |
180.0 |
| C20 |
C28 |
C27 |
C26 |
359.5 |
0.0 |
| C25 |
C26 |
C27 |
H17 |
180.0 |
179.9 |
| H1 |
C01 |
N02 |
C15 |
58.5 |
60.0 |
| H1 |
C01 |
N02 |
C03 |
298.4 |
299.8 |
| N02 |
C01 |
H1 |
H2 |
120.0 |
120.0 |
| N02 |
C01 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C01 |
H1 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
N02 |
C15 |
178.5 |
180.0 |
| H2 |
C01 |
N02 |
C03 |
58.4 |
59.8 |
| N02 |
C01 |
H2 |
H1 |
240.0 |
240.0 |
| N02 |
C01 |
H2 |
H3 |
120.0 |
120.0 |
| H1 |
C01 |
H2 |
H3 |
240.0 |
240.1 |
| H3 |
C01 |
N02 |
C15 |
298.6 |
300.0 |
| H3 |
C01 |
N02 |
C03 |
178.5 |
179.8 |
| N02 |
C01 |
H3 |
H1 |
120.0 |
120.0 |
| N02 |
C01 |
H3 |
H2 |
240.0 |
240.0 |
| H1 |
C01 |
H3 |
H2 |
120.0 |
120.0 |
| H4 |
C03 |
N02 |
C15 |
307.5 |
292.1 |
| N02 |
C03 |
H4 |
H5 |
120.0 |
120.0 |
| N02 |
C03 |
H4 |
H6 |
240.0 |
240.0 |
| H5 |
C03 |
H4 |
H6 |
120.0 |
120.0 |
| H5 |
C03 |
N02 |
C15 |
67.4 |
52.1 |
| N02 |
C03 |
H5 |
H4 |
240.0 |
240.0 |
| N02 |
C03 |
H5 |
H6 |
120.0 |
119.9 |
| H4 |
C03 |
H5 |
H6 |
240.0 |
239.9 |
| H6 |
C03 |
N02 |
C15 |
187.5 |
172.1 |
| N02 |
C03 |
H6 |
H4 |
120.0 |
120.0 |
| N02 |
C03 |
H6 |
H5 |
240.0 |
240.1 |
| H4 |
C03 |
H6 |
H5 |
120.0 |
120.1 |
| C05 |
C04 |
H7 |
H19 |
116.0 |
239.4 |
| H7 |
C04 |
N02 |
C15 |
274.4 |
47.3 |
| H8 |
C05 |
C06 |
C07 |
105.1 |
223.4 |
| C06 |
C05 |
H8 |
H20 |
116.1 |
240.1 |
| H8 |
C05 |
C04 |
H7 |
357.0 |
51.4 |
| H8 |
C05 |
C04 |
H19 |
114.5 |
290.9 |
| H9 |
C08 |
C07 |
C15 |
359.5 |
359.6 |
| O12 |
C11 |
H10 |
H11 |
121.5 |
237.1 |
| O12 |
C11 |
H11 |
H10 |
238.5 |
122.8 |
| N02 |
C15 |
H13 |
C07 |
118.4 |
121.1 |
| C07 |
C15 |
H13 |
C16 |
119.6 |
119.4 |
| N02 |
C15 |
H13 |
C16 |
237.9 |
240.6 |
| H13 |
C15 |
C16 |
C28 |
49.4 |
44.6 |
| H13 |
C15 |
C16 |
H14 |
290.0 |
283.2 |
| O17 |
C16 |
H14 |
C28 |
248.0 |
243.1 |
| C15 |
C16 |
H14 |
C28 |
125.6 |
121.5 |
| H14 |
C16 |
C15 |
H13 |
290.0 |
283.2 |
| H14 |
C16 |
C28 |
C20 |
246.2 |
240.7 |
| H14 |
C16 |
C28 |
C27 |
65.2 |
60.8 |
| O22 |
C23 |
H15 |
O24 |
242.8 |
245.6 |
| O22 |
C23 |
H15 |
H16 |
121.4 |
122.8 |
| O24 |
C23 |
H15 |
H16 |
238.6 |
237.2 |
| O22 |
C23 |
H16 |
O24 |
117.2 |
114.3 |
| O22 |
C23 |
H16 |
H15 |
238.6 |
237.1 |
| O24 |
C23 |
H16 |
H15 |
121.4 |
122.8 |
| H18 |
C27 |
C26 |
H17 |
1.6 |
0.1 |
| C05 |
C04 |
H19 |
H7 |
244.0 |
120.5 |
| H19 |
C04 |
N02 |
C15 |
156.9 |
167.6 |
| H20 |
C05 |
C06 |
C07 |
222.6 |
103.6 |
| C06 |
C05 |
H20 |
H8 |
243.9 |
119.9 |
| H20 |
C05 |
C04 |
H7 |
239.5 |
171.1 |
| H20 |
C05 |
C04 |
H19 |
357.0 |
50.6 |