PDB Chemical Component J8A

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for J8A

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
NAX CAO 1.471 1.470
NAX CAP 1.471 1.469
CAO CAS 1.533 1.530
CAP CAT 1.511 1.530
CAS NBN 1.477 1.469
CAT NBN 1.470 1.470
NBN CAU 1.477 1.469
CAU CBG 1.397 1.507
FAD CBO 1.299 1.399
CBG CAJ 1.394 1.382
CBG CBJ 1.404 1.383
CAJ CAI 1.382 1.382
CBO CBJ 1.417 1.507
CBO FAC 1.362 1.399
CBO FAE 1.354 1.399
CBJ CAN 1.396 1.381
CAI CBD 1.385 1.389
CAN CBD 1.401 1.389
CBD NAY 1.346 1.398
NAY CBB 1.349 1.349
OAA CBB 1.226 1.216
CBB CBE 1.389 1.478
CAG CBE 1.390 1.396
CAG CAF 1.392 1.380
CBE CAM 1.383 1.394
CAF CAH 1.394 1.381
CAM CBF 1.386 1.392
CAH CBF 1.392 1.395
CBF CBH 1.393 1.483
NAW CBH 1.338 1.323
NAW CBL 1.343 1.328
CBH CAK 1.386 1.397
OAB CBC 1.231 1.213
SBA CBL 1.652 1.763
SBA CBI 1.636 1.757
CBL CBK 1.349 1.401
CAK CAL 1.390 1.365
CBK CAL 1.335 1.413
CBK NAV 1.354 1.345
CBC NAZ 1.356 1.348
CBC CBM 1.533 1.506
CAR CBM 1.516 1.531
CAR CAQ 1.520 1.530
CBI NAV 1.337 1.288
CBI NAZ 1.342 1.385
CBM CAQ 1.517 1.531
CAF H1 1.080 1.081
CAG H2 1.080 1.080
CAH H3 1.080 1.079
CAI H4 1.080 1.080
CAJ H5 1.080 1.080
CAK H6 1.080 1.080
CAL H7 1.080 1.080
CAM H8 1.080 1.080
CAN H9 1.081 1.080
CAO H10 1.100 1.090
CAO H11 1.100 1.091
CAP H12 1.100 1.091
CAP H13 1.100 1.090
CAQ H14 1.100 1.090
CAQ H15 1.100 1.090
CAR H16 1.100 1.090
CAR H17 1.100 1.091
CAS H18 1.100 1.090
CAS H19 1.100 1.090
CAT H20 1.100 1.090
CAT H21 1.100 1.090
CAU H22 1.100 1.090
CAU H23 1.100 1.090
NAX H24 1.000 1.009
NAY H26 1.000 0.970
NAZ H27 1.000 0.970
CBM H28 1.100 1.091

Bond Angles for J8A

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
NAX CAO H10 109.3 109.5
NAX CAO H11 109.3 109.5
NAX CAP H12 109.2 109.5
NAX CAP H13 109.2 109.5
CAO CAS NBN 110.9 109.4
CAS CAO H10 109.3 109.5
CAS CAO H11 109.2 109.5
CAO CAS H18 109.1 109.5
CAO CAS H19 109.1 109.5
CAP CAT NBN 111.7 109.4
CAT CAP H12 109.2 109.5
CAT CAP H13 109.2 109.5
CAP CAT H20 108.9 109.5
CAP CAT H21 108.9 109.5
CAS NBN CAT 107.9 110.9
CAS NBN CAU 115.0 111.0
NBN CAS H18 109.1 109.5
NBN CAS H19 109.1 109.5
CAT NBN CAU 104.4 111.0
NBN CAT H20 108.9 109.5
NBN CAT H21 108.9 109.5
NBN CAU H22 107.4 109.5
NBN CAU H23 107.4 109.5
CAU CBG CBJ 124.0 119.9
CBG CAU H22 107.4 109.5
CBG CAU H23 107.4 109.5
FAD CBO FAE 108.8 109.5
CBG CAJ H5 119.1 120.0
CAJ CAI CBD 120.1 119.9
CAJ CAI H4 120.0 120.1
FAC CBO FAE 107.7 109.5
CBJ CAN H9 118.7 120.0
CAI CBD CAN 118.3 119.9
CAI CBD NAY 115.6 120.1
CBD CAI H4 119.9 120.0
CAN CBD NAY 126.1 120.1
CBD CAN H9 118.7 120.1
CBD NAY H26 118.3 120.0
NAY CBB OAA 126.2 120.0
NAY CBB CBE 115.8 120.0
CBB NAY H26 118.3 119.9
OAA CBB CBE 118.0 120.0
CAG CBE CBB 122.6 120.1
CAG CBE CAM 120.0 119.8
CBE CAG H2 120.4 119.9
CAG CAF CAH 120.8 120.3
CAG CAF H1 119.6 119.9
CBE CAM CBF 121.1 119.7
CBE CAM H8 119.5 120.2
CAF CAH CBF 119.6 120.1
CAH CAF H1 119.6 119.8
CAF CAH H3 120.2 120.0
CAH CBF CAM 119.3 119.9
CAM CBF CBH 118.3 120.0
CBF CAM H8 119.5 120.1
CAH CBF CBH 122.4 120.1
CBF CAH H3 120.2 119.9
NAW CBH CBF 120.5 119.7
CBH NAW CBL 121.4 121.8
NAW CBL CBK 121.6 120.8
CBH CAK H6 120.8 120.2
OAB CBC CBM 119.8 120.0
CAL CAK H6 120.8 120.2
CAK CAL H7 119.2 120.4
CBK CAL H7 119.3 120.5
CBC NAZ H27 118.6 120.0
CAR CBM CBC 115.8 117.5
CBC CBM H28 117.8 115.6
CBM CAR H16 120.0 117.5
CBM CAR H17 120.0 117.5
CAR CBM H28 118.1 117.5
CAR CAQ H14 120.0 117.5
CAR CAQ H15 120.0 117.5
CBI NAZ H27 118.6 120.0
CBM CAQ H14 120.0 117.5
CBM CAQ H15 120.0 117.5
H10 CAO H11 109.5 109.5
H12 CAP H13 109.5 109.5
H14 CAQ H15 109.4 115.6
H16 CAR H17 109.5 115.6
H18 CAS H19 109.5 109.5
H20 CAT H21 109.5 109.5
H22 CAU H23 109.5 109.4

Torsion Angles for J8A

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
NAX CAO CAS NBN 59.6 58.4
CAS CAO NAX H10 239.9 120.0
CAS CAO NAX H11 120.1 240.0
NAX CAO CAS H18 179.8 178.4
NAX CAO CAS H19 299.3 298.4
H10 CAO NAX H11 240.2 120.0
CAP NAX CAO H10 61.7 180.7
CAP NAX CAO H11 181.5 60.7
NAX CAP CAT NBN 300.4 301.6
CAT CAP NAX H12 239.8 119.9
CAT CAP NAX H13 120.1 240.0
NAX CAP CAT H20 60.7 61.6
NAX CAP CAT H21 180.0 181.6
H12 CAP NAX H13 240.3 120.1
NAX CAO CAS H10 120.1 240.0
NAX CAO CAS H11 239.9 120.0
CAO CAS NBN CAT 302.3 300.7
CAO CAS NBN CAU 186.3 176.8
NBN CAS CAO H18 239.8 240.0
NBN CAS CAO H19 120.2 119.9
H10 CAO CAS H11 119.7 240.0
H18 CAS CAO H19 240.5 239.9
NAX CAP CAT H12 120.2 240.1
NAX CAP CAT H13 239.8 120.0
CAS NBN CAT CAP 58.0 59.3
CAP CAT NBN CAU 180.8 183.2
NBN CAT CAP H20 239.6 240.0
NBN CAT CAP H21 120.3 120.0
H12 CAP CAT H13 119.7 240.0
H20 CAT CAP H21 240.7 239.9
NBN CAS CAO H10 299.5 178.4
NBN CAS CAO H11 179.7 298.4
CAO CAS NBN H18 120.2 120.0
CAO CAS NBN H19 239.8 240.0
CAP CAT NBN CAS 58.0 59.3
CAT NBN CAS CAU 116.0 123.9
CAS NBN CAT H20 297.6 299.3
CAS NBN CAT H21 178.3 179.3
CAS NBN CAU H22 67.6 70.0
CAS NBN CAU H23 185.3 310.0
H18 CAS NBN H19 119.6 120.0
NBN CAT CAP H12 180.2 61.6
NBN CAT CAP H13 60.5 181.6
CAP CAT NBN H20 120.3 120.0
CAP CAT NBN H21 239.6 240.0
CAS NBN CAT CAU 237.2 236.1
CAT NBN CAS H18 182.1 180.7
CAT NBN CAS H19 62.6 60.7
CAT NBN CAU H22 309.5 306.2
CAT NBN CAU H23 67.2 186.2
H20 CAT NBN H21 119.3 120.0
CAS NBN CAU CAT 118.1 123.8
CAU NBN CAS H18 66.1 56.8
CAU NBN CAS H19 306.5 296.8
CAU NBN CAT H20 60.5 63.2
CAU NBN CAT H21 301.2 303.2
CBG CAU NBN H22 238.9 120.0
CBG CAU NBN H23 121.1 240.0
H22 CAU NBN H23 242.3 120.0
CAS NBN CAU CBG 306.5 190.0
CAT NBN CAU CBG 188.4 66.2
NBN CAU CBG H22 121.1 240.0
NBN CAU CBG H23 238.8 120.0
CAU CBG CAJ H5 359.4 0.0
H22 CAU CBG H23 117.7 240.1
FAC CBO FAD FAE 242.9 240.0
CBG CAJ CAI H4 178.9 179.8
CBJ CBG CAU H22 150.9 200.0
CBJ CBG CAU H23 33.2 319.9
CBJ CBG CAJ H5 181.8 180.1
CBG CBJ CAN H9 180.6 180.1
CAJ CAI CBD CAN 0.2 359.7
CAJ CAI CBD NAY 180.1 179.8
CBD CAI CAJ H4 180.0 180.2
CBO CBJ CAN H9 360.0 0.3
FAD CBO FAC FAE 117.8 120.0
CBD CAN CBJ H9 180.0 179.4
CAJ CAI CBD H4 180.0 179.8
CAN CBD CAI NAY 180.1 179.9
CAI CBD CAN H9 180.1 180.0
CAI CBD NAY H26 9.7 215.1
CBJ CAN CBD H9 180.0 180.6
CAI CBD CAN NAY 179.9 180.1
CAN CBD CAI H4 180.2 179.9
CAN CBD NAY H26 189.6 35.2
CAI CBD NAY CAN 180.1 179.9
NAY CBD CAI H4 0.1 0.0
NAY CBD CAN H9 0.2 359.9
CBD NAY CBB CBE 178.9 175.4
CBB NAY CBD H26 180.0 180.0
CAI CBD NAY CBB 189.7 35.1
CAN CBD NAY CBB 9.6 215.2
CBD NAY CBB H26 180.0 180.0
OAA CBB NAY CBE 180.6 179.9
CAG CBE CBB NAY 341.4 360.0
NAY CBB OAA CBE 179.4 180.1
OAA CBB NAY H26 179.5 175.3
CAG CBE CBB OAA 160.8 180.0
NAY CBB CBE OAA 180.6 179.9
CBE CBB NAY H26 358.9 355.4
CAG CBE CBB CAM 179.3 180.0
CBB CBE CAG H2 0.5 360.0
CBB CBE CAM CBF 180.0 180.3
CBB CBE CAM H8 360.0 359.7
NAY CBB CBE CAG 341.4 360.0
OAA CBB CBE CAG 160.8 180.0
CBE CAG CAF CAH 0.2 0.0
CBE CAG CAF H1 180.2 179.7
CAG CBE CAM CBF 0.7 0.3
CAG CBE CAM H8 180.7 179.7
CAG CAF CAH CBF 359.5 359.7
CAH CAF CAG H1 180.0 180.3
CAG CAF CAH H3 179.5 179.7
CAG CBE CAM CBB 180.7 180.0
CAM CBE CAG H2 179.7 179.9
CAH CBF CAM CBE 359.0 359.5
CBE CAM CBF CBH 180.3 180.0
CBF CAM CBE H8 180.0 180.6
CAG CAF CAH H1 180.0 179.7
CAF CAH CBF CAM 0.9 0.5
CAF CAH CBF CBH 179.6 180.0
CBF CAH CAF H3 180.0 180.0
CBE CAM CBF H8 180.0 179.4
CAH CBF CAM CBH 178.7 179.4
CAM CBF CAH H3 180.9 180.5
NAW CBH CBF CAM 126.3 4.5
CBE CAM CBF CAH 359.0 359.5
CBF CAH CAF H1 179.5 180.0
CAF CAH CBF H3 180.0 180.0
CAM CBF CAH CBH 181.4 180.6
CAH CBF CAM H8 179.0 180.0
NAW CBH CBF CAH 307.6 185.0
CAH CBF CBH CAM 181.4 180.6
CBH CBF CAM H8 0.3 0.6
CBH CBF CAH H3 359.6 360.0
CBF CBH NAW CBL 180.9 179.5
CBF CBH CAK H6 359.3 0.2
CAM CBF CBH NAW 126.3 4.5
CAH CBF CBH NAW 307.6 185.0
CBH NAW CBL CBK 0.1 0.9
NAW CBH CAK H6 180.8 180.3
CBL NAW CBH CBF 180.9 179.5
CAH CBF CBH CAK 129.2 5.1
CAL CAK CBH H6 180.0 179.8
CBH CAK CAL H7 179.4 180.2
OAB CBC NAZ H27 180.2 180.0
CAR CBM CBC OAB 340.7 0.1
OAB CBC CBM H28 192.9 214.4
SBA CBI NAZ H27 158.9 181.8
CBL CBK CAL H7 180.1 180.1
CBH CAK CAL H6 180.0 180.2
CBK CAL CAK H7 180.0 180.1
CBK CAL CAK H6 179.4 180.0
CAK CAL CBK H7 180.0 179.9
NAV CBK CAL H7 0.2 0.0
CAR CBM CBC NAZ 162.4 180.0
CBI NAZ CBC H27 180.0 179.9
CBM CBC NAZ H27 358.3 0.1
CBC CBM CAR H16 213.8 0.0
CBC CBM CAR H17 354.9 215.0
CAR CBM CBC H28 147.8 145.7
CBC CBM CAQ H14 143.6 145.0
CBC CBM CAQ H15 2.5 0.0
OAB CBC CBM CAR 340.7 0.1
CBC CBM CAR H28 212.3 215.0
CBM CAR CAQ H14 109.4 107.5
CBM CAR CAQ H15 250.5 252.5
CAR CBM CAQ H14 250.6 252.5
CAR CBM CAQ H15 109.5 107.5
H16 CAR CBM H17 218.9 145.0
CBM CAQ CAR H14 250.6 252.5
CBM CAQ CAR H15 109.5 107.5
H14 CAQ CAR H15 218.9 214.9
CBC NAZ CBI H27 180.0 180.1
CAR CAQ CBM H14 109.4 107.5
CAR CAQ CBM H15 250.5 252.5
H14 CAQ CBM H15 141.1 145.0
CAG CAF H1 CAH 180.0 180.3
H1 CAF CAH CBF 179.5 180.0
H1 CAF CAH H3 359.5 0.0
H2 CAG CBE CBB 0.5 360.0
H2 CAG CBE CAM 179.7 179.9
H2 CAG CAF CAH 180.2 180.0
H2 CAG CAF H1 0.2 359.7
CAF CAH H3 CBF 180.0 180.0
H3 CAH CAF H1 359.5 0.0
H3 CAH CBF CAM 180.9 180.5
H3 CAH CBF CBH 359.6 360.0
CAJ CAI H4 CBD 180.0 180.2
H4 CAI CBD CAN 180.2 179.9
H4 CAI CBD NAY 0.1 0.0
H5 CAJ CAI CBD 178.9 179.9
H5 CAJ CAI H4 358.9 359.7
H6 CAK CAL H7 359.5 359.9
H7 CAL CAK H6 359.5 359.9
CBE CAM H8 CBF 180.0 180.6
H8 CAM CBF CBH 0.3 0.6
H9 CAN CBD NAY 0.2 359.9
NAX CAO H10 H11 119.7 239.9
H10 CAO CAS NBN 299.5 178.4
CAS CAO H10 H11 240.4 120.0
H10 CAO CAS H18 59.7 298.4
H10 CAO CAS H19 179.2 58.4
NAX CAO H11 H10 240.3 120.1
H11 CAO CAS NBN 179.7 298.4
CAS CAO H11 H10 119.6 240.0
H11 CAO CAS H18 300.0 58.4
H11 CAO CAS H19 59.5 178.4
NAX CAP H12 H13 119.5 239.9
H12 CAP CAT NBN 180.2 61.6
CAT CAP H12 H13 240.5 120.0
H12 CAP CAT H20 300.5 181.5
H12 CAP CAT H21 59.8 301.6
NAX CAP H13 H12 240.5 120.1
H13 CAP CAT NBN 60.5 181.6
CAT CAP H13 H12 119.5 240.0
H13 CAP CAT H20 180.9 301.5
H13 CAP CAT H21 300.2 61.6
CAR CAQ H14 H15 144.8 145.7
CBM CAQ H14 H15 215.2 214.4
CAR CAQ H15 H14 215.2 214.3
CBM CAQ H15 H14 144.8 145.6
H16 CAR CBM CBC 213.8 0.0
CBM CAR H16 H17 144.7 214.3
H16 CAR CBM H28 1.5 145.0
H16 CAR CAQ H14 360.0 215.0
H16 CAR CAQ H15 141.1 0.0
H17 CAR CBM CBC 354.9 215.0
CBM CAR H17 H16 215.3 145.7
H17 CAR CBM H28 142.6 0.0
H17 CAR CAQ H14 218.9 360.0
H17 CAR CAQ H15 0.0 145.0
CAO CAS H18 NBN 238.7 240.1
H18 CAS CAO H10 59.7 298.4
H18 CAS CAO H11 300.0 58.4
CAO CAS H18 H19 119.3 120.1
H18 CAS NBN CAT 182.1 180.7
H18 CAS NBN CAU 66.1 56.8
NBN CAS H18 H19 240.6 240.0
CAO CAS H19 NBN 121.4 119.9
H19 CAS CAO H10 179.2 58.4
H19 CAS CAO H11 59.5 178.4
CAO CAS H19 H18 240.7 239.9
H19 CAS NBN CAT 62.6 60.7
H19 CAS NBN CAU 306.5 296.8
NBN CAS H19 H18 119.4 120.0
CAP CAT H20 NBN 237.9 240.1
H20 CAT CAP H12 300.5 181.5
H20 CAT CAP H13 180.9 301.5
CAP CAT H20 H21 119.0 120.1
H20 CAT NBN CAU 60.5 63.2
NBN CAT H20 H21 241.0 240.0
CAP CAT H21 NBN 122.1 119.9
H21 CAT CAP H12 59.8 301.6
H21 CAT CAP H13 300.2 61.6
CAP CAT H21 H20 241.1 239.9
H21 CAT NBN CAU 301.2 303.2
NBN CAT H21 H20 119.0 120.0
NBN CAU H22 H23 116.3 240.0
H22 CAU CBG CBJ 150.9 200.0
CBG CAU H22 H23 243.7 119.9
NBN CAU H23 H22 243.7 120.0
H23 CAU CBG CBJ 33.2 319.9
CBG CAU H23 H22 116.3 240.1
H24 NAX CAO H10 181.6 304.6
H24 NAX CAO H11 301.4 184.5
H24 NAX CAP H12 58.6 175.5
H24 NAX CAP H13 178.3 55.5
H26 NAY CBB OAA 179.5 175.3
H26 NAY CBB CBE 358.9 355.4
CAR CBM H28 CBC 212.9 214.3
H28 CBM CAR H16 1.5 145.0
H28 CBM CAR H17 142.6 0.0
H28 CBM CAQ H14 358.6 360.0
H28 CBM CAQ H15 217.5 215.0