PDB Chemical Component J4H

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for J4H

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C20 C19 1.504 1.529
C20 C21 1.514 1.533
C19 O3 1.454 1.469
C21 N8 1.463 1.469
O2 C18 1.211 1.214
O3 C18 1.350 1.347
C22 N8 1.462 1.470
C22 C23 1.520 1.532
C18 N5 1.349 1.353
C16 C15 1.360 1.363
C16 C17 1.410 1.397
N5 C17 1.403 1.397
C23 C24 1.510 1.528
C15 C12 1.410 1.408
C17 N6 1.325 1.318
C24 O4 1.454 1.451
O4 C1 1.351 1.346
C12 C11 1.412 1.417
C12 C13 1.410 1.402
N6 C11 1.362 1.338
C11 N4 1.370 1.340
C13 C14 1.362 1.363
C1 O1 1.216 1.215
C1 N1 1.357 1.367
N1 C2 1.402 1.402
N4 C10 1.327 1.310
C14 C10 1.397 1.402
C10 C9 1.512 1.493
C2 N2 1.322 1.315
C2 C26 1.406 1.398
N2 C3 1.355 1.339
C26 C25 1.363 1.361
C9 N3 1.460 1.467
C3 N7 1.362 1.340
C3 C4 1.413 1.417
N7 C7 1.328 1.312
N3 C8 1.462 1.464
C25 C4 1.410 1.407
C4 C5 1.408 1.402
C7 C8 1.509 1.489
C7 C6 1.397 1.405
C5 C6 1.359 1.361
N1 H1 1.000 0.971
N3 H2 1.000 1.009
N3 H3 1.000 1.010
N5 H4 1.000 0.970
C6 H5 1.080 1.079
C13 H6 1.080 1.081
C14 H7 1.080 1.079
C15 H8 1.080 1.080
C16 H9 1.080 1.080
C19 H10 1.100 1.090
C19 H11 1.100 1.090
C20 H12 1.100 1.090
C20 H13 1.100 1.090
C21 H14 1.100 1.090
C21 H15 1.101 1.090
C22 H16 1.100 1.090
C22 H17 1.100 1.090
C23 H18 1.100 1.089
C23 H19 1.100 1.090
C24 H20 1.100 1.090
C24 H21 1.100 1.091
C25 H22 1.080 1.080
C26 H23 1.080 1.081
C5 H24 1.079 1.080
C8 H25 1.100 1.089
C8 H26 1.100 1.090
C9 H27 1.100 1.091
C9 H28 1.100 1.090
N8 H29 1.000 1.009

Bond Angles for J4H

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C20 C19 O3 109.8 109.1
C20 C19 H10 109.4 110.3
C20 C19 H11 109.4 109.4
C20 C21 N8 112.0 109.5
C21 C20 H12 108.5 109.5
C21 C20 H13 108.4 109.5
C20 C21 H14 108.9 109.5
C20 C21 H15 108.8 109.5
O3 C19 H10 109.4 109.4
O3 C19 H11 109.4 109.3
C21 N8 C22 113.4 111.1
N8 C21 H14 108.8 109.4
N8 C21 H15 108.8 109.4
C21 N8 H29 108.5 111.0
O2 C18 N5 125.8 119.5
C23 C22 N8 112.3 109.6
N8 C22 H16 108.8 109.4
N8 C22 H17 108.7 109.4
C22 N8 H29 108.4 111.0
C22 C23 C24 113.9 109.3
C23 C22 H16 108.7 109.5
C23 C22 H17 108.8 109.5
C22 C23 H18 108.4 109.5
C22 C23 H19 108.3 109.4
C18 N5 H4 115.5 121.8
C16 C15 H8 119.8 121.0
N5 C17 C16 123.3 119.7
C16 C17 N6 123.8 122.0
C17 C16 H9 120.9 120.2
N5 C17 N6 112.8 118.3
C17 N5 H4 115.4 121.8
C24 C23 H18 108.4 109.5
C24 C23 H19 108.4 109.5
C23 C24 H20 109.6 109.3
C23 C24 H21 109.6 109.3
O4 C1 O1 124.7 120.5
C12 C11 N4 122.4 120.2
C12 C13 C14 119.8 118.0
C12 C13 H6 120.1 121.1
C14 C13 H6 120.1 121.0
C13 C14 H7 120.4 119.7
C1 N1 H1 115.2 122.4
N1 C2 N2 111.6 119.6
N1 C2 C26 124.4 118.4
C2 N1 H1 115.3 122.4
C14 C10 C9 122.0 116.5
C10 C9 H27 109.3 108.3
C10 C9 H28 109.3 108.3
C26 C2 N2 124.0 122.0
C2 N2 C3 118.0 121.3
C2 C26 C25 118.0 119.7
C2 C26 H23 121.0 120.2
N2 C3 N7 115.2 120.9
C26 C25 H22 119.9 121.0
C9 N3 H2 108.6 110.2
C9 N3 H3 108.6 110.3
C3 N7 C7 117.8 121.5
C3 C4 C5 117.3 119.1
N3 C8 C7 110.6 116.7
C8 N3 H2 108.6 110.2
C8 N3 H3 108.6 110.2
N3 C8 H25 109.2 108.0
N3 C8 H26 109.2 108.0
C25 C4 C5 125.3 121.1
C4 C5 C6 119.9 118.0
C4 C5 H24 120.1 121.0
C7 C8 H25 109.2 108.0
C7 C8 H26 109.2 108.0
C7 C6 H5 120.4 119.6
C5 C6 H5 120.5 119.7
H2 N3 H3 109.5 110.1
H10 C19 H11 109.5 109.3
H12 C20 H13 109.5 109.7
H14 C21 H15 109.5 109.5
H16 C22 H17 109.4 109.4
H18 C23 H19 109.5 109.6
H20 C24 H21 109.5 109.2
H25 C8 H26 109.5 107.9
H27 C9 H28 109.5 108.0

Torsion Angles for J4H

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O3 C19 C20 H10 239.9 239.8
O3 C19 C20 H11 120.0 119.5
H10 C19 C20 H11 240.1 239.7
C21 C20 C19 O3 74.2 175.4
C21 C20 C19 H10 194.3 295.5
C21 C20 C19 H11 314.2 55.8
C20 C21 N8 C22 228.5 174.1
N8 C21 C20 H14 239.6 240.0
N8 C21 C20 H15 120.4 120.0
C20 C21 N8 H29 349.0 298.1
H12 C20 C21 H13 118.8 120.3
H14 C21 C20 H15 240.8 240.0
C20 C19 O3 H10 120.1 120.7
C20 C19 O3 H11 240.0 240.4
H10 C19 O3 H11 119.9 119.7
N8 C21 C20 H12 130.1 334.4
N8 C21 C20 H13 11.3 214.0
C20 C21 N8 H14 120.4 120.0
C20 C21 N8 H15 239.6 240.0
C23 C22 N8 C21 186.1 179.5
C21 N8 C22 H16 306.5 59.4
C21 N8 C22 H17 65.6 299.5
C22 N8 C21 H29 239.4 236.0
H14 C21 N8 H15 119.2 119.9
O2 C18 N5 H4 175.6 176.9
O3 C18 N5 H4 357.8 357.0
C22 N8 C21 H14 108.1 54.0
C22 N8 C21 H15 348.8 294.1
C21 N8 C22 H29 120.6 124.0
N8 C22 C23 C24 83.5 263.6
C23 C22 N8 H16 239.6 120.1
C23 C22 N8 H17 120.5 240.0
N8 C22 C23 H18 204.2 23.5
N8 C22 C23 H19 322.9 143.6
H16 C22 N8 H17 240.9 119.9
C21 N8 C22 C23 186.1 179.5
N8 C22 C23 H16 120.5 240.0
N8 C22 C23 H17 239.6 120.0
C23 C22 N8 H29 65.5 55.5
C24 C23 C22 H18 239.3 240.0
C24 C23 C22 H19 120.7 119.9
C22 C23 C24 H20 29.7 61.0
C22 C23 C24 H21 149.8 301.5
H16 C22 C23 H17 119.1 240.0
H18 C23 C22 H19 241.3 239.9
C18 N5 C17 N6 168.5 345.3
C17 N5 C18 H4 180.0 180.0
N5 C17 C16 C15 176.4 180.3
C17 C16 C15 H8 179.5 179.9
N5 C17 C16 N6 176.2 180.1
C16 C17 N5 H4 171.9 345.2
O2 C18 N5 C17 355.6 356.9
C18 N5 C17 H4 180.0 180.0
C16 C17 N5 N6 183.4 179.9
N5 C17 C16 H9 356.4 0.2
C24 C23 C22 N8 83.5 263.6
C24 C23 C22 H16 323.1 23.6
C24 C23 C22 H17 204.0 143.6
C22 C23 C24 H18 120.6 119.9
C22 C23 C24 H19 239.4 240.1
H18 C23 C24 H19 118.7 120.2
H20 C24 C23 H21 239.9 119.5
C15 C12 C11 N4 182.7 181.4
C15 C12 C13 H6 356.6 358.6
N5 C17 N6 C16 183.4 179.9
N6 C17 C16 H9 180.2 180.1
N6 C17 N5 H4 348.5 165.3
C24 O4 C1 O1 358.8 5.0
O4 C1 N1 H1 5.0 359.6
C13 C12 C11 N4 1.6 0.8
C14 C13 C12 H6 180.0 179.9
C12 C13 C14 H7 180.1 180.0
N5 C17 N6 C11 184.1 180.1
C12 C13 C14 H6 180.0 180.1
C13 C14 C10 C9 188.0 180.9
O1 C1 N1 H1 186.8 179.5
C1 N1 C2 N2 185.4 16.2
C1 N1 C2 C26 3.7 196.7
C2 N1 C1 H1 180.0 179.7
C1 N1 C2 H1 180.0 180.3
C26 C2 N1 N2 178.3 180.5
N1 C2 N2 C3 182.9 180.8
N1 C2 C26 C25 179.9 179.0
N1 C2 C26 H23 359.9 358.9
N4 C10 C9 H27 136.1 242.9
N4 C10 C9 H28 255.9 126.0
C14 C10 C9 H27 311.6 62.8
C14 C10 C9 H28 71.3 305.9
C10 C9 N3 H2 327.6 48.4
C10 C9 N3 H3 86.6 286.6
H27 C9 C10 H28 240.2 116.8
N1 C2 N2 C26 178.3 180.5
N2 C2 N1 H1 5.4 195.9
N2 C2 C26 C25 358.0 359.5
N2 C2 C26 H23 178.0 179.4
C2 N2 C3 N7 176.7 179.6
N1 C2 C26 N2 181.9 179.5
C26 C2 N1 H1 183.7 16.4
C26 C2 N2 C3 4.6 0.2
C2 C26 C25 H22 178.3 180.4
N2 C3 N7 C7 179.8 182.1
C25 C26 C2 N2 358.0 359.5
C2 C26 C25 H23 180.0 179.9
C26 C25 C4 C5 182.4 179.7
C8 N3 C9 H2 239.5 119.1
C8 N3 C9 H3 120.5 240.9
C9 N3 C8 H25 269.4 289.9
C9 N3 C8 H26 29.0 46.4
H2 N3 C9 H3 241.0 121.8
N7 C3 C4 C5 0.0 0.5
C2 N2 C3 C4 356.5 0.1
C25 C4 C3 C5 179.8 179.9
C3 C4 C5 C6 0.0 358.6
C3 C4 C5 H24 180.1 178.6
N7 C7 C8 H25 190.0 250.1
N7 C7 C8 H26 70.3 133.7
N7 C7 C6 H5 180.1 181.7
C9 N3 C8 H2 120.5 240.9
C9 N3 C8 H3 239.5 119.2
C7 C8 N3 H25 239.8 238.2
C7 C8 N3 H26 120.2 121.8
H2 N3 C8 H3 119.0 238.3
H25 C8 N3 H26 240.4 243.5
C2 C26 C25 C4 358.3 0.5
C3 C4 C25 C5 180.2 180.1
C25 C4 C5 C6 180.3 178.7
C25 C4 C5 H24 0.3 358.7
C4 C5 C6 H5 179.9 180.4
C3 N7 C7 C8 178.8 177.1
C7 C8 N3 H2 28.7 287.2
C7 C8 N3 H3 269.7 48.9
N3 C8 C7 H25 120.2 121.8
N3 C8 C7 H26 239.8 238.2
C8 C7 C6 H5 1.3 1.9
H25 C8 C7 H26 119.6 116.4
N3 C8 C7 C6 129.0 191.7
C5 C6 C7 H5 180.0 180.0
C4 C5 C6 H24 180.0 180.0
C7 C6 C5 H5 180.0 180.0
H1 N1 C2 N2 5.4 195.9
H1 N1 C2 C26 183.7 16.4
C9 N3 H2 H3 118.5 238.1
H2 N3 C8 C7 28.7 287.2
C8 N3 H2 H3 241.5 121.7
H2 N3 C8 H25 148.9 49.0
H2 N3 C8 H26 268.5 165.5
C9 N3 H3 H2 241.5 121.8
H3 N3 C8 C7 269.7 48.9
C8 N3 H3 H2 118.5 238.2
H3 N3 C8 H25 29.9 170.7
H3 N3 C8 H26 149.5 287.2
H4 N5 C17 C16 171.9 345.2
H4 N5 C17 N6 348.5 165.3
C12 C13 H6 C14 180.0 179.9
H6 C13 C14 H7 0.1 359.9
H7 C14 C13 H6 0.1 359.9
H7 C14 C10 C9 8.0 1.0
H9 C16 C15 H8 359.5 360.0
H9 C16 C17 N6 180.2 180.1
C20 C19 H10 O3 239.7 240.0
C20 C19 H10 H11 119.9 120.4
O3 C19 H10 H11 240.1 240.4
C20 C19 H11 O3 120.3 119.4
C20 C19 H11 H10 240.1 239.1
O3 C19 H11 H10 119.9 119.7
H12 C20 C19 O3 194.8 295.1
H12 C20 C19 H10 314.9 55.3
H12 C20 C19 H11 74.8 175.6
H12 C20 C21 N8 130.1 334.4
C21 C20 H12 H13 241.9 239.8
H12 C20 C21 H14 250.5 94.4
H12 C20 C21 H15 9.7 214.4
H13 C20 C19 O3 313.6 55.5
H13 C20 C19 H10 73.7 175.7
H13 C20 C19 H11 193.6 296.0
H13 C20 C21 N8 11.3 214.0
C21 C20 H13 H12 118.2 120.2
H13 C20 C21 H14 131.7 334.0
H13 C20 C21 H15 250.9 94.1
C20 C21 H14 N8 237.7 240.0
H14 C21 C20 H12 250.5 94.4
H14 C21 C20 H13 131.7 334.0
C20 C21 H14 H15 118.8 120.0
H14 C21 N8 C22 108.1 54.0
N8 C21 H14 H15 241.2 240.1
H14 C21 N8 H29 228.6 178.1
C20 C21 H15 N8 122.3 120.0
H15 C21 C20 H12 9.7 214.4
H15 C21 C20 H13 250.9 94.1
C20 C21 H15 H14 241.1 240.0
H15 C21 N8 C22 348.8 294.1
N8 C21 H15 H14 118.8 119.9
H15 C21 N8 H29 109.4 58.1
C23 C22 H16 N8 122.6 239.9
N8 C22 H16 H17 118.7 240.1
H16 C22 N8 H29 185.9 295.4
H16 C22 C23 C24 323.1 23.6
C23 C22 H16 H17 241.3 120.0
H16 C22 C23 H18 83.7 143.6
H16 C22 C23 H19 202.4 263.7
C23 C22 H17 N8 237.4 120.1
N8 C22 H17 H16 241.3 119.9
H17 C22 N8 H29 305.0 175.5
H17 C22 C23 C24 204.0 143.6
C23 C22 H17 H16 118.7 240.0
H17 C22 C23 H18 324.6 263.6
H17 C22 C23 H19 83.3 23.6
H18 C23 C22 N8 204.2 23.5
C22 C23 H18 C24 236.0 240.2
H18 C23 C22 H16 83.7 143.6
H18 C23 C22 H17 324.6 263.6
C22 C23 H18 H19 118.0 120.0
C24 C23 H18 H19 242.0 239.8
H18 C23 C24 H20 269.0 301.1
H18 C23 C24 H21 29.1 181.6
H19 C23 C22 N8 322.9 143.6
C22 C23 H19 C24 124.0 119.8
H19 C23 C22 H16 202.4 263.7
H19 C23 C22 H17 83.3 23.6
C22 C23 H19 H18 242.0 240.0
C24 C23 H19 H18 118.0 120.2
H19 C23 C24 H20 150.3 180.9
H19 C23 C24 H21 270.4 61.4
H20 C24 C23 H18 269.0 301.1
H20 C24 C23 H19 150.3 180.9
C23 C24 H20 H21 120.2 240.4
H21 C24 C23 H18 29.1 181.6
H21 C24 C23 H19 270.4 61.4
C23 C24 H21 H20 239.8 119.6
H22 C25 C4 C5 2.4 359.7
H23 C26 C2 N2 178.0 179.4
C2 C26 H23 C25 180.0 180.1
H23 C26 C25 H22 358.3 0.5
C4 C5 H24 C6 180.0 180.0
H24 C5 C6 H5 359.9 0.4
N3 C8 H25 C7 238.9 233.0
H25 C8 N3 H2 148.9 49.0
H25 C8 N3 H3 29.9 170.7
N3 C8 H25 H26 119.5 116.5
C7 C8 H25 H26 240.5 243.5
N3 C8 H26 C7 121.1 127.0
H26 C8 N3 H2 268.5 165.5
H26 C8 N3 H3 149.5 287.2
N3 C8 H26 H25 240.5 243.5
C7 C8 H26 H25 119.4 116.5
C10 C9 H27 H28 119.7 243.0
H27 C9 N3 H2 207.5 170.0
H27 C9 N3 H3 326.5 48.2
C10 C9 H28 H27 240.3 117.0
H28 C9 N3 H2 87.7 286.8
H28 C9 N3 H3 206.8 165.0
C21 N8 H29 C22 236.4 235.9
H29 N8 C21 H14 228.6 178.1
H29 N8 C21 H15 109.4 58.1
H29 N8 C22 H16 185.9 295.4
H29 N8 C22 H17 305.0 175.5