PDB Chemical Component J43
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for J43
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.326 |
1.329 |
| N1 |
C6 |
1.334 |
1.321 |
| C2 |
N3 |
1.323 |
1.326 |
| C2 |
S21 |
1.777 |
1.762 |
| N3 |
C4 |
1.333 |
1.327 |
| C4 |
C5 |
1.393 |
1.416 |
| C4 |
N7 |
1.422 |
1.378 |
| C5 |
C6 |
1.399 |
1.405 |
| C5 |
C18 |
1.486 |
1.462 |
| C6 |
CL20 |
1.723 |
1.735 |
| N7 |
C8 |
1.358 |
1.398 |
| C8 |
C9 |
1.393 |
1.390 |
| C8 |
C13 |
1.386 |
1.389 |
| C9 |
C10 |
1.389 |
1.381 |
| C10 |
C11 |
1.399 |
1.383 |
| C11 |
C12 |
1.397 |
1.383 |
| C11 |
S14 |
1.707 |
1.762 |
| C12 |
C13 |
1.389 |
1.381 |
| S14 |
O15 |
1.500 |
1.422 |
| S14 |
O16 |
1.494 |
1.420 |
| S14 |
N17 |
1.711 |
1.657 |
| C18 |
O19 |
1.229 |
1.214 |
| S21 |
C22 |
1.811 |
1.811 |
| N7 |
HN7 |
1.000 |
0.969 |
| C9 |
H9 |
1.080 |
1.080 |
| C10 |
H10 |
1.080 |
1.080 |
| C12 |
H12 |
1.080 |
1.081 |
| C13 |
H13 |
1.080 |
1.080 |
| N17 |
HN17 |
1.000 |
0.970 |
| N17 |
HN1A |
1.000 |
0.970 |
| C18 |
H18 |
1.080 |
1.079 |
| C22 |
H22 |
1.100 |
1.090 |
| C22 |
H22A |
1.099 |
1.090 |
| C22 |
H22B |
1.100 |
1.090 |
Bond Angles for J43
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
120.4 |
121.1 |
| N1 |
C2 |
N3 |
120.0 |
122.2 |
| N1 |
C2 |
S21 |
121.7 |
118.9 |
| N1 |
C6 |
C5 |
121.3 |
119.0 |
| N1 |
C6 |
CL20 |
117.9 |
120.5 |
| N3 |
C2 |
S21 |
118.3 |
118.9 |
| C2 |
N3 |
C4 |
122.9 |
120.9 |
| C2 |
S21 |
C22 |
109.7 |
100.0 |
| N3 |
C4 |
C5 |
119.1 |
118.8 |
| N3 |
C4 |
N7 |
114.4 |
120.7 |
| C5 |
C4 |
N7 |
126.2 |
120.6 |
| C4 |
C5 |
C6 |
116.2 |
118.1 |
| C4 |
C5 |
C18 |
122.1 |
120.9 |
| C4 |
N7 |
C8 |
128.9 |
120.0 |
| C4 |
N7 |
HN7 |
115.6 |
120.0 |
| C6 |
C5 |
C18 |
121.6 |
121.0 |
| C5 |
C6 |
CL20 |
120.8 |
120.5 |
| C5 |
C18 |
O19 |
124.3 |
119.9 |
| C5 |
C18 |
H18 |
117.8 |
120.0 |
| N7 |
C8 |
C9 |
124.0 |
120.0 |
| N7 |
C8 |
C13 |
115.4 |
120.1 |
| C8 |
N7 |
HN7 |
115.5 |
120.0 |
| C9 |
C8 |
C13 |
120.6 |
119.9 |
| C8 |
C9 |
C10 |
119.6 |
119.9 |
| C8 |
C9 |
H9 |
120.2 |
120.0 |
| C8 |
C13 |
C12 |
120.1 |
119.9 |
| C8 |
C13 |
H13 |
120.0 |
120.0 |
| C9 |
C10 |
C11 |
120.0 |
120.1 |
| C10 |
C9 |
H9 |
120.2 |
120.1 |
| C9 |
C10 |
H10 |
120.0 |
120.0 |
| C10 |
C11 |
C12 |
119.9 |
120.1 |
| C10 |
C11 |
S14 |
119.6 |
119.9 |
| C11 |
C10 |
H10 |
120.0 |
120.0 |
| C12 |
C11 |
S14 |
120.5 |
120.0 |
| C11 |
C12 |
C13 |
119.8 |
120.1 |
| C11 |
C12 |
H12 |
120.1 |
119.9 |
| C11 |
S14 |
O15 |
107.4 |
106.4 |
| C11 |
S14 |
O16 |
104.6 |
106.4 |
| C11 |
S14 |
N17 |
108.7 |
107.2 |
| C13 |
C12 |
H12 |
120.1 |
120.0 |
| C12 |
C13 |
H13 |
120.0 |
120.1 |
| O15 |
S14 |
O16 |
115.5 |
123.2 |
| O15 |
S14 |
N17 |
110.7 |
106.4 |
| O16 |
S14 |
N17 |
109.6 |
106.4 |
| S14 |
N17 |
HN17 |
109.5 |
120.0 |
| S14 |
N17 |
HN1A |
109.5 |
120.0 |
| O19 |
C18 |
H18 |
117.9 |
120.0 |
| S21 |
C22 |
H22 |
109.5 |
109.4 |
| S21 |
C22 |
H22A |
109.5 |
109.5 |
| S21 |
C22 |
H22B |
109.5 |
109.4 |
| HN17 |
N17 |
HN1A |
109.5 |
120.0 |
| H22 |
C22 |
H22A |
109.5 |
109.5 |
| H22 |
C22 |
H22B |
109.4 |
109.5 |
| H22A |
C22 |
H22B |
109.5 |
109.5 |
Torsion Angles for J43
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C6 |
C5 |
359.5 |
0.1 |
| C2 |
N1 |
C6 |
CL20 |
179.7 |
180.0 |
| N3 |
C2 |
N1 |
S21 |
180.3 |
179.9 |
| N1 |
C2 |
N3 |
C4 |
358.3 |
0.1 |
| N1 |
C2 |
S21 |
C22 |
160.6 |
359.9 |
| C6 |
N1 |
C2 |
N3 |
0.2 |
359.9 |
| C6 |
N1 |
C2 |
S21 |
179.9 |
180.0 |
| C4 |
C5 |
C6 |
N1 |
2.1 |
360.0 |
| N1 |
C6 |
C5 |
C18 |
180.2 |
180.0 |
| C5 |
C6 |
N1 |
CL20 |
179.8 |
180.0 |
| N3 |
C2 |
N1 |
C6 |
0.2 |
359.9 |
| N1 |
C2 |
N3 |
S21 |
179.7 |
180.1 |
| N3 |
C2 |
S21 |
C22 |
340.3 |
180.0 |
| C2 |
N3 |
C4 |
C5 |
3.4 |
359.9 |
| C2 |
N3 |
C4 |
N7 |
177.0 |
180.0 |
| S21 |
C2 |
N1 |
C6 |
179.9 |
180.0 |
| N1 |
C2 |
S21 |
N3 |
180.3 |
179.9 |
| S21 |
C2 |
N3 |
C4 |
178.5 |
180.0 |
| C2 |
S21 |
C22 |
H22 |
180.0 |
180.0 |
| C2 |
S21 |
C22 |
H22A |
300.0 |
300.0 |
| C2 |
S21 |
C22 |
H22B |
60.0 |
60.1 |
| C4 |
N3 |
C2 |
S21 |
178.5 |
180.0 |
| C5 |
C4 |
N3 |
N7 |
186.4 |
179.9 |
| N3 |
C4 |
C5 |
C6 |
356.6 |
0.1 |
| N3 |
C4 |
C5 |
C18 |
178.5 |
180.0 |
| N3 |
C4 |
N7 |
C8 |
45.9 |
354.3 |
| N3 |
C4 |
N7 |
HN7 |
225.9 |
174.5 |
| N1 |
C6 |
C5 |
C4 |
2.1 |
360.0 |
| N3 |
C4 |
C5 |
N7 |
172.8 |
180.1 |
| C5 |
C4 |
N7 |
C8 |
218.9 |
174.4 |
| C5 |
C4 |
N7 |
HN7 |
39.0 |
354.5 |
| C6 |
C5 |
C4 |
C18 |
178.1 |
180.0 |
| C4 |
C5 |
C6 |
CL20 |
181.9 |
180.0 |
| C4 |
C5 |
C18 |
O19 |
10.6 |
180.0 |
| C4 |
C5 |
C18 |
H18 |
190.6 |
0.0 |
| N3 |
C4 |
N7 |
C5 |
187.0 |
179.9 |
| N7 |
C4 |
C5 |
C6 |
183.8 |
180.0 |
| N7 |
C4 |
C5 |
C18 |
5.7 |
359.9 |
| C4 |
N7 |
C8 |
C9 |
8.8 |
147.2 |
| C4 |
N7 |
C8 |
C13 |
187.0 |
326.9 |
| C8 |
N7 |
C4 |
HN7 |
180.0 |
179.9 |
| N1 |
C6 |
C5 |
CL20 |
180.2 |
180.0 |
| C6 |
C5 |
C4 |
N7 |
183.8 |
180.0 |
| C4 |
C5 |
C6 |
C18 |
181.9 |
180.0 |
| C6 |
C5 |
C18 |
O19 |
192.7 |
360.0 |
| C6 |
C5 |
C18 |
H18 |
12.6 |
180.0 |
| C18 |
C5 |
C4 |
N7 |
5.7 |
359.9 |
| C4 |
C5 |
C18 |
C6 |
178.0 |
180.0 |
| C18 |
C5 |
C6 |
CL20 |
360.0 |
0.0 |
| O19 |
C18 |
C5 |
H18 |
180.0 |
180.0 |
| N1 |
C6 |
CL20 |
C5 |
179.8 |
180.0 |
| CL20 |
C6 |
C5 |
C18 |
360.0 |
0.0 |
| C4 |
N7 |
C8 |
HN7 |
180.0 |
180.1 |
| C9 |
C8 |
N7 |
C13 |
181.8 |
180.2 |
| N7 |
C8 |
C9 |
C10 |
177.8 |
180.0 |
| N7 |
C8 |
C9 |
H9 |
357.8 |
0.0 |
| N7 |
C8 |
C13 |
C12 |
181.7 |
179.7 |
| N7 |
C8 |
C13 |
H13 |
1.7 |
360.0 |
| N7 |
C8 |
C9 |
C13 |
178.1 |
179.8 |
| C9 |
C8 |
N7 |
HN7 |
188.8 |
327.0 |
| C9 |
C8 |
C13 |
C12 |
359.9 |
359.5 |
| C9 |
C8 |
C13 |
H13 |
179.9 |
179.7 |
| C8 |
C9 |
C10 |
C11 |
0.6 |
0.0 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
| C8 |
C9 |
C10 |
H10 |
180.7 |
180.0 |
| N7 |
C8 |
C13 |
C9 |
181.8 |
180.2 |
| C13 |
C8 |
N7 |
HN7 |
6.9 |
146.8 |
| C13 |
C8 |
C9 |
C10 |
359.7 |
0.3 |
| C13 |
C8 |
C9 |
H9 |
179.7 |
180.2 |
| C11 |
C12 |
C13 |
C8 |
0.2 |
0.5 |
| C8 |
C13 |
C12 |
H12 |
180.2 |
180.3 |
| C12 |
C13 |
C8 |
H13 |
180.0 |
179.8 |
| C10 |
C9 |
C8 |
C13 |
359.7 |
0.3 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
| C9 |
C10 |
C11 |
C12 |
359.4 |
359.9 |
| C9 |
C10 |
C11 |
S14 |
180.2 |
180.0 |
| C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
| C11 |
C10 |
C9 |
H9 |
180.6 |
180.0 |
| C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
| C12 |
C11 |
C10 |
S14 |
179.3 |
180.0 |
| C10 |
C11 |
C12 |
C13 |
0.2 |
359.8 |
| C10 |
C11 |
C12 |
H12 |
180.2 |
180.0 |
| C10 |
C11 |
S14 |
O15 |
201.5 |
203.5 |
| C10 |
C11 |
S14 |
O16 |
78.3 |
336.4 |
| C10 |
C11 |
S14 |
N17 |
321.3 |
90.0 |
| C8 |
C13 |
C12 |
C11 |
0.2 |
0.5 |
| C10 |
C11 |
C12 |
S14 |
180.8 |
180.0 |
| C12 |
C11 |
C10 |
H10 |
179.4 |
180.0 |
| C12 |
C11 |
S14 |
O15 |
22.3 |
23.5 |
| C12 |
C11 |
S14 |
O16 |
259.1 |
156.5 |
| C12 |
C11 |
S14 |
N17 |
142.1 |
270.0 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
179.8 |
| C11 |
C12 |
C13 |
H13 |
180.2 |
180.3 |
| C10 |
C11 |
S14 |
C12 |
179.3 |
180.0 |
| S14 |
C11 |
C10 |
H10 |
0.2 |
360.0 |
| S14 |
C11 |
C12 |
C13 |
179.4 |
179.8 |
| S14 |
C11 |
C12 |
H12 |
359.4 |
359.9 |
| O15 |
S14 |
C11 |
O16 |
123.2 |
227.1 |
| O15 |
S14 |
C11 |
N17 |
240.2 |
113.5 |
| O16 |
S14 |
C11 |
N17 |
117.0 |
246.4 |
| C11 |
S14 |
N17 |
HN17 |
180.0 |
360.0 |
| C11 |
S14 |
N17 |
HN1A |
300.0 |
180.0 |
| C8 |
C13 |
C12 |
H13 |
180.0 |
180.2 |
| C13 |
C12 |
C11 |
S14 |
179.4 |
179.8 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.2 |
| C11 |
S14 |
O15 |
O16 |
243.8 |
123.0 |
| C11 |
S14 |
O15 |
N17 |
118.5 |
245.9 |
| O16 |
S14 |
O15 |
N17 |
234.7 |
122.9 |
| O15 |
S14 |
N17 |
HN17 |
297.7 |
246.5 |
| O15 |
S14 |
N17 |
HN1A |
57.7 |
66.5 |
| C11 |
S14 |
O16 |
O15 |
117.8 |
237.1 |
| C11 |
S14 |
O16 |
N17 |
243.6 |
114.1 |
| O15 |
S14 |
O16 |
N17 |
125.9 |
237.1 |
| O16 |
S14 |
N17 |
HN17 |
66.2 |
113.6 |
| O16 |
S14 |
N17 |
HN1A |
186.3 |
293.6 |
| C11 |
S14 |
N17 |
O15 |
242.3 |
113.5 |
| C11 |
S14 |
N17 |
O16 |
113.8 |
246.4 |
| O15 |
S14 |
N17 |
O16 |
231.5 |
132.9 |
| HN17 |
N17 |
S14 |
HN1A |
239.9 |
180.0 |
| C5 |
C18 |
O19 |
H18 |
180.0 |
180.0 |
| H22 |
C22 |
S21 |
H22A |
240.0 |
240.0 |
| H22 |
C22 |
S21 |
H22B |
120.0 |
120.0 |
| H22A |
C22 |
S21 |
H22B |
240.0 |
239.9 |
| C4 |
N7 |
HN7 |
C8 |
180.0 |
179.9 |
| HN7 |
N7 |
C8 |
C9 |
188.8 |
327.0 |
| HN7 |
N7 |
C8 |
C13 |
6.9 |
146.8 |
| H9 |
C9 |
C8 |
C13 |
179.7 |
180.2 |
| C8 |
C9 |
H9 |
C10 |
180.0 |
180.0 |
| H9 |
C9 |
C10 |
C11 |
180.6 |
180.0 |
| H9 |
C9 |
C10 |
H10 |
0.6 |
0.0 |
| C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
| H10 |
C10 |
C9 |
H9 |
0.6 |
0.0 |
| H10 |
C10 |
C11 |
C12 |
179.4 |
180.0 |
| H10 |
C10 |
C11 |
S14 |
0.2 |
360.0 |
| H12 |
C12 |
C11 |
S14 |
359.4 |
359.9 |
| C11 |
C12 |
H12 |
C13 |
180.0 |
179.8 |
| H12 |
C12 |
C13 |
H13 |
0.2 |
0.1 |
| C8 |
C13 |
H13 |
C12 |
180.0 |
179.8 |
| H13 |
C13 |
C12 |
H12 |
0.2 |
0.1 |
| S14 |
N17 |
HN17 |
HN1A |
120.0 |
180.0 |
| S14 |
N17 |
HN1A |
HN17 |
240.0 |
180.0 |
| C5 |
C18 |
H18 |
O19 |
180.0 |
180.0 |
| S21 |
C22 |
H22 |
H22A |
120.0 |
120.0 |
| S21 |
C22 |
H22 |
H22B |
240.0 |
240.1 |
| H22A |
C22 |
H22 |
H22B |
120.0 |
120.1 |
| S21 |
C22 |
H22A |
H22 |
240.0 |
240.0 |
| S21 |
C22 |
H22A |
H22B |
120.0 |
120.0 |
| H22 |
C22 |
H22A |
H22B |
240.0 |
240.0 |
| S21 |
C22 |
H22B |
H22 |
120.0 |
119.9 |
| S21 |
C22 |
H22B |
H22A |
240.0 |
240.0 |
| H22 |
C22 |
H22B |
H22A |
120.0 |
120.0 |